RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 A6NED7 52 aa7.79□□□□□ -1.16
OTUB1-212ENST00000543988 MT1GP13640 62 aa7.79□□□□□ -1.16
OTUB1-212ENST00000543988 MT1LQ93083 61 aa7.79□□□□□ -1.16
OTUB1-212ENST00000543988 KRTAP25-1Q3LHN0 102 aa7.73□□□□□ -1.17
OTUB1-212ENST00000543988 PP632Q6XCG6 107 aa7.71□□□□□ -1.18
OTUB1-212ENST00000543988 MT1MQ8N339 61 aa7.7□□□□□ -1.18
OTUB1-212ENST00000543988 KRTAP12-3P60328 96 aa7.66□□□□□ -1.18
OTUB1-212ENST00000543988 DSTQ03001 7570 aaKnown RBP7.63□□□□□ -1.19
OTUB1-212ENST00000543988 KRTAP4-3Q9BYR4 195 aa7.53□□□□□ -1.2
OTUB1-212ENST00000543988 CDC42SE1Q9NRR8 79 aa7.49□□□□□ -1.21
OTUB1-212ENST00000543988 KRTAP4-7Q9BYR0 210 aa7.43□□□□□ -1.22
OTUB1-212ENST00000543988 KRTAP23-1A1A580 65 aa7.42□□□□□ -1.22
OTUB1-212ENST00000543988 ROMO1P60602 79 aa7.39□□□□□ -1.23
OTUB1-212ENST00000543988 KRTAP4-9Q9BYQ8 210 aa7.37□□□□□ -1.23
OTUB1-212ENST00000543988 LCE4AQ5TA78 99 aa7.26□□□□□ -1.25
OTUB1-212ENST00000543988 KRTAP15-1Q3LI76 137 aa7.23□□□□□ -1.25
OTUB1-212ENST00000543988 LCE1DQ5T752 114 aa7.23□□□□□ -1.25
OTUB1-212ENST00000543988 GPR98Q8WXG9 6306 aa7.21□□□□□ -1.26
OTUB1-212ENST00000543988 KRTAP5-4Q6L8H1 288 aa7.2□□□□□ -1.26
OTUB1-212ENST00000543988 HMCN1Q96RW7 5635 aa7.17□□□□□ -1.26
OTUB1-212ENST00000543988 MT4P47944 62 aa7.17□□□□□ -1.26
OTUB1-212ENST00000543988 KRTAP19-4Q3LI73 84 aa7.17□□□□□ -1.26
OTUB1-212ENST00000543988 LCE3CQ5T5A8 94 aa7.07□□□□□ -1.28
OTUB1-212ENST00000543988 KRTAP5-5Q701N2 237 aaPredicted RBP7.04□□□□□ -1.28
OTUB1-212ENST00000543988 LOC100996750A0A140TA64 210 aa7.02□□□□□ -1.29
OTUB1-212ENST00000543988 KRTAP4-6Q9BYQ5 205 aa7□□□□□ -1.29
OTUB1-212ENST00000543988 BRK1Q8WUW1 75 aa6.94□□□□□ -1.3
OTUB1-212ENST00000543988 AHNAK2Q8IVF2 5795 aa6.84□□□□□ -1.31
OTUB1-212ENST00000543988 KRTAP20-2Q3LI61 65 aa6.78□□□□□ -1.32
OTUB1-212ENST00000543988 SPRR5A0A1B0GTR4 108 aa6.76□□□□□ -1.33
OTUB1-212ENST00000543988 KRTAP12-4P60329 112 aa6.76□□□□□ -1.33
OTUB1-212ENST00000543988 KRTAP9-6A8MVA2 160 aa6.71□□□□□ -1.34
OTUB1-212ENST00000543988 SYNE1Q8NF91 8797 aaKnown RBP6.69□□□□□ -1.34
OTUB1-212ENST00000543988 MT1AP04731 61 aa6.62□□□□□ -1.35
OTUB1-212ENST00000543988 SVIPQ8NHG7 77 aa6.6□□□□□ -1.35
OTUB1-212ENST00000543988 KRTAP5-10Q6L8G5 202 aa6.59□□□□□ -1.35
OTUB1-212ENST00000543988 KRTAP6-1Q3LI64 71 aa6.58□□□□□ -1.36
OTUB1-212ENST00000543988 KRTAP5-3Q6L8H2 238 aa6.57□□□□□ -1.36
OTUB1-212ENST00000543988 PMAIP1Q13794 54 aa6.5□□□□□ -1.37
OTUB1-212ENST00000543988 KRTAP5-2Q701N4 177 aa6.36□□□□□ -1.39
OTUB1-212ENST00000543988 KRTAP9-4Q9BYQ2 154 aa6.35□□□□□ -1.39
OTUB1-212ENST00000543988 KRTAP5-7Q6L8G8 165 aa6.29□□□□□ -1.4
OTUB1-212ENST00000543988 PRAC1Q96KF2 57 aa6.29□□□□□ -1.4
OTUB1-212ENST00000543988 KRTAP6-2Q3LI66 62 aa6.24□□□□□ -1.41
OTUB1-212ENST00000543988 PRO0628Q9UI54 55 aa6.19□□□□□ -1.42
OTUB1-212ENST00000543988 KRTAP4-11Q9BYQ6 195 aa6.12□□□□□ -1.43
OTUB1-212ENST00000543988 MT3P25713 68 aa6.03□□□□□ -1.44
OTUB1-212ENST00000543988 KRTAP5-8O75690 187 aa5.92□□□□□ -1.46
OTUB1-212ENST00000543988 KTN1-AS1Q86SY8 53 aa5.89□□□□□ -1.47
OTUB1-212ENST00000543988 OBSCNQ5VST9 7968 aa5.78□□□□□ -1.48
OTUB1-212ENST00000543988 KRTAP5-1Q6L8H4 278 aa5.65□□□□□ -1.5
OTUB1-212ENST00000543988 MUC5ACP98088 5654 aa5.62□□□□□ -1.51
OTUB1-212ENST00000543988 AHNAKQ09666 5890 aaKnown RBP5.61□□□□□ -1.51
OTUB1-212ENST00000543988 MUC5BQ9HC84 5762 aaPredicted RBP5.6□□□□□ -1.51
OTUB1-212ENST00000543988 KRTAP9-9Q9BYP9 154 aa5.54□□□□□ -1.52
OTUB1-212ENST00000543988 LCE1EQ5T753 118 aa5.47□□□□□ -1.53
OTUB1-212ENST00000543988 LUZP6Q538Z0 58 aa5.2□□□□□ -1.58
OTUB1-212ENST00000543988 KRTAP4-2Q9BYR5 136 aa5.19□□□□□ -1.58
OTUB1-212ENST00000543988 LCE1BQ5T7P3 118 aa5.16□□□□□ -1.58
OTUB1-212ENST00000543988 LCE3DQ9BYE3 92 aa5.13□□□□□ -1.59
OTUB1-212ENST00000543988 LCE1CQ5T751 118 aa5.08□□□□□ -1.6
OTUB1-212ENST00000543988 LCE3EQ5T5B0 92 aa4.86□□□□□ -1.63
OTUB1-212ENST00000543988 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.66□□□□□ -1.66
OTUB1-212ENST00000543988 A0A0A0MQY5 61 aa4.61□□□□□ -1.67
OTUB1-212ENST00000543988 KRTAP4-12Q9BQ66 201 aa4.61□□□□□ -1.67
OTUB1-212ENST00000543988 KRTAP5-11Q6L8G4 156 aa4.6□□□□□ -1.67
OTUB1-212ENST00000543988 H3BS24 57 aa4.54□□□□□ -1.68
OTUB1-212ENST00000543988 NDUFAF8A1L188 74 aa4.39□□□□□ -1.71
OTUB1-212ENST00000543988 LCE1FQ5T754 118 aa4.38□□□□□ -1.71
OTUB1-212ENST00000543988 KRTAP21-2Q3LI59 83 aa4.33□□□□□ -1.72
OTUB1-212ENST00000543988 PHGR1C9JFL3 82 aa3.96□□□□□ -1.78
OTUB1-212ENST00000543988 KRTAP4-4Q9BYR3 166 aa3.94□□□□□ -1.78
OTUB1-212ENST00000543988 PRM1P04553 51 aa3.81□□□□□ -1.8
OTUB1-212ENST00000543988 MUC19Q7Z5P9 8384 aa3.59□□□□□ -1.84
OTUB1-212ENST00000543988 INE1O15225 51 aa3.5□□□□□ -1.85
OTUB1-212ENST00000543988 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
OTUB1-212ENST00000543988 MUC16Q8WXI7 14507 aa2.57□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 104.1 ms