RNA–Protein interactions for RNA: ENST00000543590.1

VPS37B-204, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 1,457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-204ENST00000543590 SPINT4Q6UDR6 99 aa5.42□□□□□ -1.54
VPS37B-204ENST00000543590 LCE3BQ5TA77 95 aa5.41□□□□□ -1.54
VPS37B-204ENST00000543590 KRTAP12-1P59990 96 aa5.39□□□□□ -1.55
VPS37B-204ENST00000543590 KRTAP19-7Q3SYF9 63 aa5.37□□□□□ -1.55
VPS37B-204ENST00000543590 KRTAP19-4Q3LI73 84 aa5.34□□□□□ -1.55
VPS37B-204ENST00000543590 MT1EP04732 61 aa5.32□□□□□ -1.56
VPS37B-204ENST00000543590 LCE5AQ5TCM9 118 aa5.29□□□□□ -1.56
VPS37B-204ENST00000543590 K7ERS5 55 aa5.27□□□□□ -1.57
VPS37B-204ENST00000543590 KRTAP19-3Q7Z4W3 81 aa5.27□□□□□ -1.57
VPS37B-204ENST00000543590 KRTAP9-9Q9BYP9 154 aa5.26□□□□□ -1.57
VPS37B-204ENST00000543590 KRTAP9-4Q9BYQ2 154 aa5.26□□□□□ -1.57
VPS37B-204ENST00000543590 KRTAP19-5Q3LI72 72 aa5.24□□□□□ -1.57
VPS37B-204ENST00000543590 PRAC1Q96KF2 57 aa5.2□□□□□ -1.58
VPS37B-204ENST00000543590 KRTAP4-12Q9BQ66 201 aa5.19□□□□□ -1.58
VPS37B-204ENST00000543590 KRTAP4-7Q9BYR0 210 aa5.19□□□□□ -1.58
VPS37B-204ENST00000543590 C10orf95Q9H7T3 257 aa5.16□□□□□ -1.58
VPS37B-204ENST00000543590 MT1GP13640 62 aa5.15□□□□□ -1.58
VPS37B-204ENST00000543590 TNP1P09430 55 aa5.13□□□□□ -1.59
VPS37B-204ENST00000543590 DSTQ03001 7570 aaKnown RBP5.13□□□□□ -1.59
VPS37B-204ENST00000543590 LCE3AQ5TA76 89 aa5.12□□□□□ -1.59
VPS37B-204ENST00000543590 ROMO1P60602 79 aa5.1□□□□□ -1.59
VPS37B-204ENST00000543590 PP632Q6XCG6 107 aa5.1□□□□□ -1.59
VPS37B-204ENST00000543590 MT1LQ93083 61 aa5.08□□□□□ -1.6
VPS37B-204ENST00000543590 KRTAP25-1Q3LHN0 102 aa5.07□□□□□ -1.6
VPS37B-204ENST00000543590 MT1MQ8N339 61 aa5.07□□□□□ -1.6
VPS37B-204ENST00000543590 KRTAP4-9Q9BYQ8 210 aa5.04□□□□□ -1.6
VPS37B-204ENST00000543590 LCE1DQ5T752 114 aa5.03□□□□□ -1.6
VPS37B-204ENST00000543590 A0A0A0MQY5 61 aa4.98□□□□□ -1.61
VPS37B-204ENST00000543590 KRTAP4-3Q9BYR4 195 aa4.96□□□□□ -1.62
VPS37B-204ENST00000543590 KRTAP4-2Q9BYR5 136 aa4.94□□□□□ -1.62
VPS37B-204ENST00000543590 KRTAP12-3P60328 96 aa4.92□□□□□ -1.62
VPS37B-204ENST00000543590 LCE4AQ5TA78 99 aa4.92□□□□□ -1.62
VPS37B-204ENST00000543590 MT4P47944 62 aa4.87□□□□□ -1.63
VPS37B-204ENST00000543590 KRTAP5-4Q6L8H1 288 aa4.83□□□□□ -1.64
VPS37B-204ENST00000543590 KRTAP5-3Q6L8H2 238 aa4.83□□□□□ -1.64
VPS37B-204ENST00000543590 GPR98Q8WXG9 6306 aa4.79□□□□□ -1.64
VPS37B-204ENST00000543590 KRTAP15-1Q3LI76 137 aa4.72□□□□□ -1.65
VPS37B-204ENST00000543590 HMCN1Q96RW7 5635 aa4.72□□□□□ -1.65
VPS37B-204ENST00000543590 KRTAP4-11Q9BYQ6 195 aa4.67□□□□□ -1.66
VPS37B-204ENST00000543590 KRTAP5-5Q701N2 237 aaPredicted RBP4.65□□□□□ -1.66
VPS37B-204ENST00000543590 KRTAP5-10Q6L8G5 202 aa4.56□□□□□ -1.68
VPS37B-204ENST00000543590 KRTAP20-2Q3LI61 65 aa4.56□□□□□ -1.68
VPS37B-204ENST00000543590 AHNAK2Q8IVF2 5795 aa4.54□□□□□ -1.68
VPS37B-204ENST00000543590 SPRR5A0A1B0GTR4 108 aa4.54□□□□□ -1.68
VPS37B-204ENST00000543590 LCE3CQ5T5A8 94 aa4.54□□□□□ -1.68
VPS37B-204ENST00000543590 KRTAP12-4P60329 112 aa4.52□□□□□ -1.69
VPS37B-204ENST00000543590 KRTAP5-7Q6L8G8 165 aa4.39□□□□□ -1.71
VPS37B-204ENST00000543590 SYNE1Q8NF91 8797 aaKnown RBP4.36□□□□□ -1.71
VPS37B-204ENST00000543590 NDUFAF8A1L188 74 aa4.33□□□□□ -1.72
VPS37B-204ENST00000543590 MT1AP04731 61 aa4.33□□□□□ -1.72
VPS37B-204ENST00000543590 KRTAP6-1Q3LI64 71 aa4.3□□□□□ -1.72
VPS37B-204ENST00000543590 KRTAP9-6A8MVA2 160 aa4.29□□□□□ -1.72
VPS37B-204ENST00000543590 LUZP6Q538Z0 58 aa4.24□□□□□ -1.73
VPS37B-204ENST00000543590 KRTAP5-2Q701N4 177 aa4.23□□□□□ -1.73
VPS37B-204ENST00000543590 KRTAP6-2Q3LI66 62 aa4.11□□□□□ -1.75
VPS37B-204ENST00000543590 KRTAP5-8O75690 187 aa4.02□□□□□ -1.77
VPS37B-204ENST00000543590 MT3P25713 68 aa3.96□□□□□ -1.78
VPS37B-204ENST00000543590 OBSCNQ5VST9 7968 aa3.93□□□□□ -1.78
VPS37B-204ENST00000543590 KRTAP5-1Q6L8H4 278 aa3.79□□□□□ -1.8
VPS37B-204ENST00000543590 MUC5ACP98088 5654 aa3.76□□□□□ -1.81
VPS37B-204ENST00000543590 AHNAKQ09666 5890 aaKnown RBP3.7□□□□□ -1.82
VPS37B-204ENST00000543590 MUC5BQ9HC84 5762 aaPredicted RBP3.7□□□□□ -1.82
VPS37B-204ENST00000543590 INE1O15225 51 aa3.67□□□□□ -1.82
VPS37B-204ENST00000543590 LCE1EQ5T753 118 aa3.64□□□□□ -1.83
VPS37B-204ENST00000543590 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.51□□□□□ -1.85
VPS37B-204ENST00000543590 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
VPS37B-204ENST00000543590 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
VPS37B-204ENST00000543590 LCE1CQ5T751 118 aa3.37□□□□□ -1.87
VPS37B-204ENST00000543590 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
VPS37B-204ENST00000543590 KRTAP5-11Q6L8G4 156 aa3.11□□□□□ -1.91
VPS37B-204ENST00000543590 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
VPS37B-204ENST00000543590 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
VPS37B-204ENST00000543590 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.96
VPS37B-204ENST00000543590 PHGR1C9JFL3 82 aa2.65□□□□□ -1.98
VPS37B-204ENST00000543590 PRM1P04553 51 aa2.65□□□□□ -1.99
VPS37B-204ENST00000543590 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
VPS37B-204ENST00000543590 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
VPS37B-204ENST00000543590 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 34.6 ms