RNA–Protein interactions for RNA: ENST00000543511.1

DDX11-225, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-225ENST00000543511 LCE1EQ5T753 118 aa4.2□□□□□ -1.74
DDX11-225ENST00000543511 KMT2DO14686 5537 aa4.18□□□□□ -1.74
DDX11-225ENST00000543511 KRTAP5-9P26371 169 aa4.17□□□□□ -1.74
DDX11-225ENST00000543511 MIR22HGQ0VDD5 57 aa4.17□□□□□ -1.74
DDX11-225ENST00000543511 KRTAP8-1Q8IUC2 63 aa4.12□□□□□ -1.75
DDX11-225ENST00000543511 C10orf95Q9H7T3 257 aa4.1□□□□□ -1.75
DDX11-225ENST00000543511 A6NED7 52 aa4.09□□□□□ -1.75
DDX11-225ENST00000543511 LCE3EQ5T5B0 92 aa4.09□□□□□ -1.75
DDX11-225ENST00000543511 NEBP20929 6669 aa4.08□□□□□ -1.76
DDX11-225ENST00000543511 MUC12Q9UKN1 5478 aa4.07□□□□□ -1.76
DDX11-225ENST00000543511 SPRR2FQ96RM1 72 aa4.06□□□□□ -1.76
DDX11-225ENST00000543511 K7ERS5 55 aa4□□□□□ -1.77
DDX11-225ENST00000543511 TNP1P09430 55 aa4□□□□□ -1.77
DDX11-225ENST00000543511 MDN1Q9NU22 5596 aa3.99□□□□□ -1.77
DDX11-225ENST00000543511 CDC42SE1Q9NRR8 79 aa3.98□□□□□ -1.77
DDX11-225ENST00000543511 KRTAP19-7Q3SYF9 63 aa3.96□□□□□ -1.78
DDX11-225ENST00000543511 SPRR2EP22531 72 aa3.95□□□□□ -1.78
DDX11-225ENST00000543511 SPRR2BP35325 72 aa3.95□□□□□ -1.78
DDX11-225ENST00000543511 SPRR2AP35326 72 aa3.95□□□□□ -1.78
DDX11-225ENST00000543511 LCE3AQ5TA76 89 aa3.94□□□□□ -1.78
DDX11-225ENST00000543511 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
DDX11-225ENST00000543511 PRO0628Q9UI54 55 aa3.92□□□□□ -1.78
DDX11-225ENST00000543511 KRTAP9-6A8MVA2 160 aa3.91□□□□□ -1.78
DDX11-225ENST00000543511 MT1EP04732 61 aa3.91□□□□□ -1.78
DDX11-225ENST00000543511 KRTAP19-5Q3LI72 72 aa3.91□□□□□ -1.78
DDX11-225ENST00000543511 LUZP6Q538Z0 58 aa3.91□□□□□ -1.78
DDX11-225ENST00000543511 KRTAP25-1Q3LHN0 102 aa3.9□□□□□ -1.79
DDX11-225ENST00000543511 SPRR2DP22532 72 aa3.82□□□□□ -1.8
DDX11-225ENST00000543511 ROMO1P60602 79 aa3.82□□□□□ -1.8
DDX11-225ENST00000543511 KRTAP19-3Q7Z4W3 81 aa3.82□□□□□ -1.8
DDX11-225ENST00000543511 KRTAP20-1Q3LI63 56 aa3.8□□□□□ -1.8
DDX11-225ENST00000543511 MT1LQ93083 61 aa3.78□□□□□ -1.8
DDX11-225ENST00000543511 KRTAP12-3P60328 96 aa3.77□□□□□ -1.81
DDX11-225ENST00000543511 BRK1Q8WUW1 75 aa3.77□□□□□ -1.81
DDX11-225ENST00000543511 KRTAP2-3P0C7H8 128 aa3.76□□□□□ -1.81
DDX11-225ENST00000543511 KRTAP2-4Q9BYR9 128 aa3.76□□□□□ -1.81
DDX11-225ENST00000543511 MT1GP13640 62 aa3.74□□□□□ -1.81
DDX11-225ENST00000543511 MT1MQ8N339 61 aa3.71□□□□□ -1.82
DDX11-225ENST00000543511 PP632Q6XCG6 107 aa3.68□□□□□ -1.82
DDX11-225ENST00000543511 KRTAP2-1Q9BYU5 128 aa3.65□□□□□ -1.83
DDX11-225ENST00000543511 SPRR5A0A1B0GTR4 108 aa3.64□□□□□ -1.83
DDX11-225ENST00000543511 DSTQ03001 7570 aaKnown RBP3.63□□□□□ -1.83
DDX11-225ENST00000543511 KRTAP4-3Q9BYR4 195 aa3.62□□□□□ -1.83
DDX11-225ENST00000543511 PMAIP1Q13794 54 aa3.54□□□□□ -1.84
DDX11-225ENST00000543511 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.54□□□□□ -1.84
DDX11-225ENST00000543511 LCE3DQ9BYE3 92 aa3.5□□□□□ -1.85
DDX11-225ENST00000543511 KRTAP5-4Q6L8H1 288 aa3.41□□□□□ -1.86
DDX11-225ENST00000543511 KRTAP5-5Q701N2 237 aaPredicted RBP3.39□□□□□ -1.87
DDX11-225ENST00000543511 MT4P47944 62 aa3.31□□□□□ -1.88
DDX11-225ENST00000543511 KTN1-AS1Q86SY8 53 aa3.3□□□□□ -1.88
DDX11-225ENST00000543511 HMCN1Q96RW7 5635 aa3.27□□□□□ -1.89
DDX11-225ENST00000543511 MT1AP04731 61 aa3.22□□□□□ -1.89
DDX11-225ENST00000543511 SYNE1Q8NF91 8797 aaKnown RBP3.22□□□□□ -1.89
DDX11-225ENST00000543511 KRTAP5-1Q6L8H4 278 aa3.2□□□□□ -1.9
DDX11-225ENST00000543511 KRTAP6-1Q3LI64 71 aa3.19□□□□□ -1.9
DDX11-225ENST00000543511 KRTAP12-4P60329 112 aa3.18□□□□□ -1.9
DDX11-225ENST00000543511 KRTAP20-2Q3LI61 65 aa3.18□□□□□ -1.9
DDX11-225ENST00000543511 AHNAK2Q8IVF2 5795 aa3.14□□□□□ -1.91
DDX11-225ENST00000543511 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
DDX11-225ENST00000543511 KRTAP5-2Q701N4 177 aa3.04□□□□□ -1.92
DDX11-225ENST00000543511 KRTAP5-10Q6L8G5 202 aa2.99□□□□□ -1.93
DDX11-225ENST00000543511 KRTAP6-2Q3LI66 62 aa2.98□□□□□ -1.93
DDX11-225ENST00000543511 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
DDX11-225ENST00000543511 KRTAP5-7Q6L8G8 165 aa2.84□□□□□ -1.95
DDX11-225ENST00000543511 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
DDX11-225ENST00000543511 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
DDX11-225ENST00000543511 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
DDX11-225ENST00000543511 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
DDX11-225ENST00000543511 MUC5ACP98088 5654 aa2.61□□□□□ -1.99
DDX11-225ENST00000543511 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
DDX11-225ENST00000543511 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
DDX11-225ENST00000543511 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
DDX11-225ENST00000543511 INE1O15225 51 aa2.11□□□□□ -2.07
DDX11-225ENST00000543511 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
DDX11-225ENST00000543511 PRM1P04553 51 aa1.98□□□□□ -2.09
DDX11-225ENST00000543511 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
DDX11-225ENST00000543511 KRTAP21-1Q3LI58 79 aa1.29□□□□□ -2.2
DDX11-225ENST00000543511 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 58.2 ms