RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 C10orf95Q9H7T3 257 aa7.08□□□□□ -1.28
TMED3-204ENST00000543455 LCE3BQ5TA77 95 aa7.05□□□□□ -1.28
TMED3-204ENST00000543455 KRTAP19-7Q3SYF9 63 aa7.03□□□□□ -1.28
TMED3-204ENST00000543455 MT1EP04732 61 aa6.95□□□□□ -1.3
TMED3-204ENST00000543455 PRAC1Q96KF2 57 aa6.95□□□□□ -1.3
TMED3-204ENST00000543455 LCE5AQ5TCM9 118 aa6.92□□□□□ -1.3
TMED3-204ENST00000543455 TNP1P09430 55 aa6.9□□□□□ -1.31
TMED3-204ENST00000543455 KRTAP25-1Q3LHN0 102 aa6.89□□□□□ -1.31
TMED3-204ENST00000543455 KRTAP19-3Q7Z4W3 81 aa6.87□□□□□ -1.31
TMED3-204ENST00000543455 KRTAP19-5Q3LI72 72 aa6.81□□□□□ -1.32
TMED3-204ENST00000543455 DSTQ03001 7570 aaKnown RBP6.8□□□□□ -1.32
TMED3-204ENST00000543455 PP632Q6XCG6 107 aa6.7□□□□□ -1.34
TMED3-204ENST00000543455 KRTAP23-1A1A580 65 aa6.68□□□□□ -1.34
TMED3-204ENST00000543455 MT1GP13640 62 aa6.68□□□□□ -1.34
TMED3-204ENST00000543455 LCE3AQ5TA76 89 aa6.65□□□□□ -1.35
TMED3-204ENST00000543455 MT1LQ93083 61 aa6.64□□□□□ -1.35
TMED3-204ENST00000543455 MT1MQ8N339 61 aa6.61□□□□□ -1.35
TMED3-204ENST00000543455 KRTAP4-9Q9BYQ8 210 aa6.6□□□□□ -1.35
TMED3-204ENST00000543455 KRTAP4-3Q9BYR4 195 aa6.5□□□□□ -1.37
TMED3-204ENST00000543455 GPR98Q8WXG9 6306 aa6.47□□□□□ -1.37
TMED3-204ENST00000543455 LCE1DQ5T752 114 aa6.45□□□□□ -1.38
TMED3-204ENST00000543455 KRTAP12-3P60328 96 aa6.4□□□□□ -1.39
TMED3-204ENST00000543455 LCE4AQ5TA78 99 aa6.4□□□□□ -1.39
TMED3-204ENST00000543455 HMCN1Q96RW7 5635 aa6.37□□□□□ -1.39
TMED3-204ENST00000543455 MT4P47944 62 aa6.34□□□□□ -1.39
TMED3-204ENST00000543455 KRTAP5-4Q6L8H1 288 aa6.34□□□□□ -1.39
TMED3-204ENST00000543455 KRTAP4-7Q9BYR0 210 aa6.34□□□□□ -1.39
TMED3-204ENST00000543455 KRTAP15-1Q3LI76 137 aa6.22□□□□□ -1.41
TMED3-204ENST00000543455 KRTAP4-6Q9BYQ5 205 aa6.22□□□□□ -1.41
TMED3-204ENST00000543455 AHNAK2Q8IVF2 5795 aa6.19□□□□□ -1.42
TMED3-204ENST00000543455 H3BS24 57 aa6.19□□□□□ -1.42
TMED3-204ENST00000543455 KRTAP5-5Q701N2 237 aaPredicted RBP6.1□□□□□ -1.43
TMED3-204ENST00000543455 KRTAP19-4Q3LI73 84 aa6.08□□□□□ -1.44
TMED3-204ENST00000543455 A0A0A0MQY5 61 aa6.04□□□□□ -1.44
TMED3-204ENST00000543455 KRTAP5-10Q6L8G5 202 aa6.02□□□□□ -1.45
TMED3-204ENST00000543455 LOC100996750A0A140TA64 210 aa6.01□□□□□ -1.45
TMED3-204ENST00000543455 KRTAP20-2Q3LI61 65 aa5.97□□□□□ -1.45
TMED3-204ENST00000543455 LCE3CQ5T5A8 94 aa5.97□□□□□ -1.45
TMED3-204ENST00000543455 SPRR5A0A1B0GTR4 108 aa5.9□□□□□ -1.46
TMED3-204ENST00000543455 KRTAP5-3Q6L8H2 238 aa5.86□□□□□ -1.47
TMED3-204ENST00000543455 KRTAP12-4P60329 112 aa5.84□□□□□ -1.47
TMED3-204ENST00000543455 LUZP6Q538Z0 58 aa5.83□□□□□ -1.48
TMED3-204ENST00000543455 SYNE1Q8NF91 8797 aaKnown RBP5.82□□□□□ -1.48
TMED3-204ENST00000543455 KRTAP5-7Q6L8G8 165 aa5.77□□□□□ -1.49
TMED3-204ENST00000543455 NDUFAF8A1L188 74 aa5.64□□□□□ -1.51
TMED3-204ENST00000543455 KRTAP9-6A8MVA2 160 aa5.63□□□□□ -1.51
TMED3-204ENST00000543455 MT1AP04731 61 aa5.63□□□□□ -1.51
TMED3-204ENST00000543455 KRTAP6-1Q3LI64 71 aa5.63□□□□□ -1.51
TMED3-204ENST00000543455 KRTAP5-2Q701N4 177 aa5.57□□□□□ -1.52
TMED3-204ENST00000543455 KRTAP9-4Q9BYQ2 154 aa5.45□□□□□ -1.54
TMED3-204ENST00000543455 KRTAP4-11Q9BYQ6 195 aa5.44□□□□□ -1.54
TMED3-204ENST00000543455 KRTAP6-2Q3LI66 62 aa5.36□□□□□ -1.55
TMED3-204ENST00000543455 KRTAP5-8O75690 187 aa5.29□□□□□ -1.56
TMED3-204ENST00000543455 OBSCNQ5VST9 7968 aa5.16□□□□□ -1.58
TMED3-204ENST00000543455 MT3P25713 68 aa5.12□□□□□ -1.59
TMED3-204ENST00000543455 MUC5BQ9HC84 5762 aaPredicted RBP5.07□□□□□ -1.6
TMED3-204ENST00000543455 AHNAKQ09666 5890 aaKnown RBP5.07□□□□□ -1.6
TMED3-204ENST00000543455 MUC5ACP98088 5654 aa5.05□□□□□ -1.6
TMED3-204ENST00000543455 KRTAP5-1Q6L8H4 278 aa5□□□□□ -1.61
TMED3-204ENST00000543455 KRTAP9-9Q9BYP9 154 aa4.94□□□□□ -1.62
TMED3-204ENST00000543455 INE1O15225 51 aa4.83□□□□□ -1.64
TMED3-204ENST00000543455 LCE1EQ5T753 118 aa4.72□□□□□ -1.65
TMED3-204ENST00000543455 KRTAP4-2Q9BYR5 136 aa4.52□□□□□ -1.69
TMED3-204ENST00000543455 LCE1BQ5T7P3 118 aa4.43□□□□□ -1.7
TMED3-204ENST00000543455 LCE3DQ9BYE3 92 aa4.43□□□□□ -1.7
TMED3-204ENST00000543455 LCE1CQ5T751 118 aa4.38□□□□□ -1.71
TMED3-204ENST00000543455 LCE3EQ5T5B0 92 aa4.29□□□□□ -1.72
TMED3-204ENST00000543455 KRTAP4-12Q9BQ66 201 aa4.08□□□□□ -1.76
TMED3-204ENST00000543455 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.01□□□□□ -1.77
TMED3-204ENST00000543455 KRTAP5-11Q6L8G4 156 aa3.98□□□□□ -1.77
TMED3-204ENST00000543455 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
TMED3-204ENST00000543455 KRTAP21-2Q3LI59 83 aa3.72□□□□□ -1.81
TMED3-204ENST00000543455 PRM1P04553 51 aa3.68□□□□□ -1.82
TMED3-204ENST00000543455 PHGR1C9JFL3 82 aa3.47□□□□□ -1.85
TMED3-204ENST00000543455 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
TMED3-204ENST00000543455 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
TMED3-204ENST00000543455 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
TMED3-204ENST00000543455 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 8.6 ms