RNA–Protein interactions for RNA: ENST00000543190.5

LTBR-211, Transcript of lymphotoxin beta receptor, humanhuman

TSL 3 BASIC

Gene LTBR, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-211ENST00000543190 C10orf95Q9H7T3 257 aa6.46□□□□□ -1.38
LTBR-211ENST00000543190 LCE3AQ5TA76 89 aa6.45□□□□□ -1.38
LTBR-211ENST00000543190 TNP1P09430 55 aa6.43□□□□□ -1.38
LTBR-211ENST00000543190 KRTAP5-10Q6L8G5 202 aa6.42□□□□□ -1.38
LTBR-211ENST00000543190 KRTAP4-3Q9BYR4 195 aa6.4□□□□□ -1.38
LTBR-211ENST00000543190 A0A1B0GU69 56 aa6.39□□□□□ -1.39
LTBR-211ENST00000543190 AHNAK2Q8IVF2 5795 aa6.38□□□□□ -1.39
LTBR-211ENST00000543190 KRTAP4-6Q9BYQ5 205 aa6.38□□□□□ -1.39
LTBR-211ENST00000543190 Q1T7F1 81 aa6.36□□□□□ -1.39
LTBR-211ENST00000543190 A8MU10 97 aa6.35□□□□□ -1.39
LTBR-211ENST00000543190 PRR15LQ9BU68 103 aa6.29□□□□□ -1.4
LTBR-211ENST00000543190 LINC01558Q9Y6Z2 57 aa6.26□□□□□ -1.41
LTBR-211ENST00000543190 KRTAP12-3P60328 96 aa6.24□□□□□ -1.41
LTBR-211ENST00000543190 KRTAP5-7Q6L8G8 165 aa6.23□□□□□ -1.41
LTBR-211ENST00000543190 KRTAP5-5Q701N2 237 aaPredicted RBP6.21□□□□□ -1.42
LTBR-211ENST00000543190 KRTAP5-3Q6L8H2 238 aa6.19□□□□□ -1.42
LTBR-211ENST00000543190 KRTAP4-7Q9BYR0 210 aa6.19□□□□□ -1.42
LTBR-211ENST00000543190 SPRR5A0A1B0GTR4 108 aa6.18□□□□□ -1.42
LTBR-211ENST00000543190 KRTAP20-2Q3LI61 65 aa6.16□□□□□ -1.42
LTBR-211ENST00000543190 PSPHP1O15172 72 aa6.15□□□□□ -1.42
LTBR-211ENST00000543190 KRTAP19-4Q3LI73 84 aa6.09□□□□□ -1.43
LTBR-211ENST00000543190 A6NED7 52 aa6.06□□□□□ -1.44
LTBR-211ENST00000543190 UQCR11O14957 56 aa6.04□□□□□ -1.44
LTBR-211ENST00000543190 KRTAP12-4P60329 112 aa6.04□□□□□ -1.44
LTBR-211ENST00000543190 BRK1Q8WUW1 75 aa6.02□□□□□ -1.45
LTBR-211ENST00000543190 KRTAP25-1Q3LHN0 102 aa5.99□□□□□ -1.45
LTBR-211ENST00000543190 PRO0628Q9UI54 55 aa5.98□□□□□ -1.45
LTBR-211ENST00000543190 CDC42SE1Q9NRR8 79 aa5.97□□□□□ -1.45
LTBR-211ENST00000543190 MIR22HGQ0VDD5 57 aa5.92□□□□□ -1.46
LTBR-211ENST00000543190 LOC100996750A0A140TA64 210 aa5.88□□□□□ -1.47
LTBR-211ENST00000543190 KRTAP23-1A1A580 65 aa5.86□□□□□ -1.47
LTBR-211ENST00000543190 SYNE1Q8NF91 8797 aaKnown RBP5.85□□□□□ -1.47
LTBR-211ENST00000543190 K7ERS5 55 aa5.82□□□□□ -1.48
LTBR-211ENST00000543190 KRTAP15-1Q3LI76 137 aa5.76□□□□□ -1.49
LTBR-211ENST00000543190 LCE3CQ5T5A8 94 aa5.74□□□□□ -1.49
LTBR-211ENST00000543190 PMAIP1Q13794 54 aa5.73□□□□□ -1.49
LTBR-211ENST00000543190 KRTAP5-2Q701N4 177 aa5.73□□□□□ -1.49
LTBR-211ENST00000543190 KRTAP4-11Q9BYQ6 195 aa5.69□□□□□ -1.5
LTBR-211ENST00000543190 MT1AP04731 61 aa5.65□□□□□ -1.5
LTBR-211ENST00000543190 SVIPQ8NHG7 77 aa5.61□□□□□ -1.51
LTBR-211ENST00000543190 KRTAP6-1Q3LI64 71 aa5.59□□□□□ -1.51
LTBR-211ENST00000543190 KTN1-AS1Q86SY8 53 aa5.53□□□□□ -1.52
LTBR-211ENST00000543190 KRTAP5-8O75690 187 aa5.52□□□□□ -1.53
LTBR-211ENST00000543190 KRTAP9-4Q9BYQ2 154 aa5.48□□□□□ -1.53
LTBR-211ENST00000543190 ROMO1P60602 79 aa5.43□□□□□ -1.54
LTBR-211ENST00000543190 KRTAP9-6A8MVA2 160 aa5.41□□□□□ -1.54
LTBR-211ENST00000543190 KRTAP6-2Q3LI66 62 aa5.37□□□□□ -1.55
LTBR-211ENST00000543190 MUC5ACP98088 5654 aa5.35□□□□□ -1.55
LTBR-211ENST00000543190 MUC5BQ9HC84 5762 aaPredicted RBP5.3□□□□□ -1.56
LTBR-211ENST00000543190 AHNAKQ09666 5890 aaKnown RBP5.27□□□□□ -1.57
LTBR-211ENST00000543190 OBSCNQ5VST9 7968 aa5.26□□□□□ -1.57
LTBR-211ENST00000543190 KRTAP9-9Q9BYP9 154 aa5.24□□□□□ -1.57
LTBR-211ENST00000543190 PRAC1Q96KF2 57 aa5.19□□□□□ -1.58
LTBR-211ENST00000543190 MT3P25713 68 aa5.17□□□□□ -1.58
LTBR-211ENST00000543190 KRTAP5-1Q6L8H4 278 aa5.16□□□□□ -1.58
LTBR-211ENST00000543190 H3BS24 57 aa5.08□□□□□ -1.6
LTBR-211ENST00000543190 LCE1EQ5T753 118 aa4.91□□□□□ -1.62
LTBR-211ENST00000543190 KRTAP4-2Q9BYR5 136 aa4.6□□□□□ -1.67
LTBR-211ENST00000543190 LCE1CQ5T751 118 aa4.54□□□□□ -1.68
LTBR-211ENST00000543190 LCE1BQ5T7P3 118 aa4.54□□□□□ -1.68
LTBR-211ENST00000543190 LUZP6Q538Z0 58 aa4.5□□□□□ -1.69
LTBR-211ENST00000543190 KRTAP4-12Q9BQ66 201 aa4.3□□□□□ -1.72
LTBR-211ENST00000543190 NDUFAF8A1L188 74 aa4.24□□□□□ -1.73
LTBR-211ENST00000543190 A0A0A0MQY5 61 aa4.18□□□□□ -1.74
LTBR-211ENST00000543190 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.15□□□□□ -1.75
LTBR-211ENST00000543190 KRTAP5-11Q6L8G4 156 aa4.14□□□□□ -1.75
LTBR-211ENST00000543190 LCE1FQ5T754 118 aa4.12□□□□□ -1.75
LTBR-211ENST00000543190 LCE3DQ9BYE3 92 aa4.07□□□□□ -1.76
LTBR-211ENST00000543190 LCE3EQ5T5B0 92 aa3.78□□□□□ -1.8
LTBR-211ENST00000543190 KRTAP21-2Q3LI59 83 aa3.74□□□□□ -1.81
LTBR-211ENST00000543190 PHGR1C9JFL3 82 aa3.68□□□□□ -1.82
LTBR-211ENST00000543190 INE1O15225 51 aa3.68□□□□□ -1.82
LTBR-211ENST00000543190 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
LTBR-211ENST00000543190 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
LTBR-211ENST00000543190 KRTAP21-1Q3LI58 79 aa2.85□□□□□ -1.95
LTBR-211ENST00000543190 PRM1P04553 51 aa2.77□□□□□ -1.97
LTBR-211ENST00000543190 MUC16Q8WXI7 14507 aa2.36□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 78.8 ms