RNA–Protein interactions for RNA: ENST00000542040.1

TRPT1-212, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 2

Gene TRPT1, Length 914 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-212ENST00000542040 C10orf95Q9H7T3 257 aa6.37□□□□□ -1.39
TRPT1-212ENST00000542040 TNP1P09430 55 aa6.36□□□□□ -1.39
TRPT1-212ENST00000542040 KRTAP19-5Q3LI72 72 aa6.36□□□□□ -1.39
TRPT1-212ENST00000542040 DSTQ03001 7570 aaKnown RBP6.3□□□□□ -1.4
TRPT1-212ENST00000542040 KRTAP4-9Q9BYQ8 210 aa6.2□□□□□ -1.42
TRPT1-212ENST00000542040 LCE3AQ5TA76 89 aa6.18□□□□□ -1.42
TRPT1-212ENST00000542040 MT1LQ93083 61 aa6.18□□□□□ -1.42
TRPT1-212ENST00000542040 MT1MQ8N339 61 aa6.17□□□□□ -1.42
TRPT1-212ENST00000542040 LCE4AQ5TA78 99 aa6.16□□□□□ -1.42
TRPT1-212ENST00000542040 CDC42SE1Q9NRR8 79 aa6.14□□□□□ -1.43
TRPT1-212ENST00000542040 KRTAP25-1Q3LHN0 102 aa6.11□□□□□ -1.43
TRPT1-212ENST00000542040 LCE1DQ5T752 114 aa6.07□□□□□ -1.44
TRPT1-212ENST00000542040 MT4P47944 62 aa6.02□□□□□ -1.45
TRPT1-212ENST00000542040 KRTAP12-3P60328 96 aa6.02□□□□□ -1.45
TRPT1-212ENST00000542040 GPR98Q8WXG9 6306 aa6.01□□□□□ -1.45
TRPT1-212ENST00000542040 ROMO1P60602 79 aa5.99□□□□□ -1.45
TRPT1-212ENST00000542040 KRTAP4-3Q9BYR4 195 aa5.94□□□□□ -1.46
TRPT1-212ENST00000542040 KRTAP5-4Q6L8H1 288 aa5.91□□□□□ -1.46
TRPT1-212ENST00000542040 BRK1Q8WUW1 75 aa5.89□□□□□ -1.47
TRPT1-212ENST00000542040 HMCN1Q96RW7 5635 aa5.87□□□□□ -1.47
TRPT1-212ENST00000542040 KRTAP19-4Q3LI73 84 aa5.85□□□□□ -1.47
TRPT1-212ENST00000542040 KRTAP23-1A1A580 65 aa5.83□□□□□ -1.48
TRPT1-212ENST00000542040 KRTAP4-7Q9BYR0 210 aa5.79□□□□□ -1.48
TRPT1-212ENST00000542040 KRTAP4-6Q9BYQ5 205 aa5.78□□□□□ -1.48
TRPT1-212ENST00000542040 KRTAP12-4P60329 112 aa5.69□□□□□ -1.5
TRPT1-212ENST00000542040 SPRR5A0A1B0GTR4 108 aa5.65□□□□□ -1.5
TRPT1-212ENST00000542040 KRTAP15-1Q3LI76 137 aa5.65□□□□□ -1.5
TRPT1-212ENST00000542040 KRTAP5-10Q6L8G5 202 aa5.65□□□□□ -1.5
TRPT1-212ENST00000542040 AHNAK2Q8IVF2 5795 aa5.63□□□□□ -1.51
TRPT1-212ENST00000542040 KRTAP5-5Q701N2 237 aaPredicted RBP5.63□□□□□ -1.51
TRPT1-212ENST00000542040 KRTAP20-2Q3LI61 65 aa5.6□□□□□ -1.51
TRPT1-212ENST00000542040 PMAIP1Q13794 54 aa5.55□□□□□ -1.52
TRPT1-212ENST00000542040 KRTAP5-3Q6L8H2 238 aa5.54□□□□□ -1.52
TRPT1-212ENST00000542040 LCE3CQ5T5A8 94 aa5.53□□□□□ -1.52
TRPT1-212ENST00000542040 LOC100996750A0A140TA64 210 aa5.5□□□□□ -1.53
TRPT1-212ENST00000542040 KRTAP5-7Q6L8G8 165 aa5.49□□□□□ -1.53
TRPT1-212ENST00000542040 PRO0628Q9UI54 55 aa5.35□□□□□ -1.55
TRPT1-212ENST00000542040 SYNE1Q8NF91 8797 aaKnown RBP5.35□□□□□ -1.55
TRPT1-212ENST00000542040 MT1AP04731 61 aa5.29□□□□□ -1.56
TRPT1-212ENST00000542040 PRAC1Q96KF2 57 aa5.26□□□□□ -1.57
TRPT1-212ENST00000542040 KRTAP6-1Q3LI64 71 aa5.2□□□□□ -1.58
TRPT1-212ENST00000542040 KRTAP4-11Q9BYQ6 195 aa5.16□□□□□ -1.58
TRPT1-212ENST00000542040 KRTAP5-2Q701N4 177 aa5.15□□□□□ -1.59
TRPT1-212ENST00000542040 KRTAP9-4Q9BYQ2 154 aa5.14□□□□□ -1.59
TRPT1-212ENST00000542040 KRTAP9-6A8MVA2 160 aa5.13□□□□□ -1.59
TRPT1-212ENST00000542040 KTN1-AS1Q86SY8 53 aa5.05□□□□□ -1.6
TRPT1-212ENST00000542040 KRTAP6-2Q3LI66 62 aa5.02□□□□□ -1.61
TRPT1-212ENST00000542040 KRTAP5-8O75690 187 aa4.93□□□□□ -1.62
TRPT1-212ENST00000542040 MT3P25713 68 aa4.92□□□□□ -1.62
TRPT1-212ENST00000542040 SVIPQ8NHG7 77 aa4.91□□□□□ -1.62
TRPT1-212ENST00000542040 KRTAP9-9Q9BYP9 154 aa4.83□□□□□ -1.64
TRPT1-212ENST00000542040 OBSCNQ5VST9 7968 aa4.76□□□□□ -1.65
TRPT1-212ENST00000542040 MUC5BQ9HC84 5762 aaPredicted RBP4.66□□□□□ -1.66
TRPT1-212ENST00000542040 MUC5ACP98088 5654 aa4.65□□□□□ -1.66
TRPT1-212ENST00000542040 KRTAP5-1Q6L8H4 278 aa4.63□□□□□ -1.67
TRPT1-212ENST00000542040 AHNAKQ09666 5890 aaKnown RBP4.63□□□□□ -1.67
TRPT1-212ENST00000542040 LCE1EQ5T753 118 aa4.52□□□□□ -1.69
TRPT1-212ENST00000542040 LUZP6Q538Z0 58 aa4.43□□□□□ -1.7
TRPT1-212ENST00000542040 LCE1BQ5T7P3 118 aa4.23□□□□□ -1.73
TRPT1-212ENST00000542040 LCE1CQ5T751 118 aa4.17□□□□□ -1.74
TRPT1-212ENST00000542040 KRTAP4-2Q9BYR5 136 aa4.15□□□□□ -1.75
TRPT1-212ENST00000542040 LCE3DQ9BYE3 92 aa4.04□□□□□ -1.76
TRPT1-212ENST00000542040 NDUFAF8A1L188 74 aa3.85□□□□□ -1.79
TRPT1-212ENST00000542040 LCE3EQ5T5B0 92 aa3.85□□□□□ -1.79
TRPT1-212ENST00000542040 KRTAP4-12Q9BQ66 201 aa3.8□□□□□ -1.8
TRPT1-212ENST00000542040 LCE1FQ5T754 118 aa3.76□□□□□ -1.81
TRPT1-212ENST00000542040 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
TRPT1-212ENST00000542040 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
TRPT1-212ENST00000542040 H3BS24 57 aa3.64□□□□□ -1.83
TRPT1-212ENST00000542040 KRTAP21-2Q3LI59 83 aa3.42□□□□□ -1.86
TRPT1-212ENST00000542040 PHGR1C9JFL3 82 aa3.35□□□□□ -1.87
TRPT1-212ENST00000542040 A0A0A0MQY5 61 aa3.22□□□□□ -1.89
TRPT1-212ENST00000542040 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
TRPT1-212ENST00000542040 INE1O15225 51 aa3.11□□□□□ -1.91
TRPT1-212ENST00000542040 PRM1P04553 51 aa3.09□□□□□ -1.91
TRPT1-212ENST00000542040 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
TRPT1-212ENST00000542040 KRTAP21-1Q3LI58 79 aa2.6□□□□□ -1.99
TRPT1-212ENST00000542040 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 10 ms