RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 CRIPTQ9P021 101 aa2.46□□□□□ -2.02
CPSF7-220ENST00000541963 PP632Q6XCG6 107 aa2.45□□□□□ -2.02
CPSF7-220ENST00000541963 SSPOA2VEC9 5147 aa2.45□□□□□ -2.02
CPSF7-220ENST00000541963 P0C880 135 aa2.44□□□□□ -2.02
CPSF7-220ENST00000541963 KRTAP19-6Q3LI70 58 aa2.41□□□□□ -2.02
CPSF7-220ENST00000541963 FCGBPQ9Y6R7 5405 aaPredicted RBP2.39□□□□□ -2.03
CPSF7-220ENST00000541963 SPRR2GQ9BYE4 73 aa2.38□□□□□ -2.03
CPSF7-220ENST00000541963 R4GN34 69 aa2.38□□□□□ -2.03
CPSF7-220ENST00000541963 KRTAP19-8Q3LI54 63 aa2.36□□□□□ -2.03
CPSF7-220ENST00000541963 M0QZ58 72 aa2.35□□□□□ -2.03
CPSF7-220ENST00000541963 MACF1Q9UPN3 7388 aaKnown RBP2.35□□□□□ -2.03
CPSF7-220ENST00000541963 SYNE2Q8WXH0 6885 aaKnown RBP2.33□□□□□ -2.04
CPSF7-220ENST00000541963 MT1BP07438 61 aa2.33□□□□□ -2.04
CPSF7-220ENST00000541963 PLAC4Q8WY50 150 aa2.31□□□□□ -2.04
CPSF7-220ENST00000541963 KRTAP6-3Q3LI67 103 aa2.29□□□□□ -2.04
CPSF7-220ENST00000541963 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
CPSF7-220ENST00000541963 KRTAP5-4Q6L8H1 288 aa2.28□□□□□ -2.04
CPSF7-220ENST00000541963 PRO2289Q9P1D8 64 aa2.28□□□□□ -2.04
CPSF7-220ENST00000541963 KRTAP5-5Q701N2 237 aaPredicted RBP2.27□□□□□ -2.05
CPSF7-220ENST00000541963 A0A0D9SG42 100 aa2.25□□□□□ -2.05
CPSF7-220ENST00000541963 KRTAP12-1P59990 96 aa2.24□□□□□ -2.05
CPSF7-220ENST00000541963 KRTAP13-4Q3LI77 160 aa2.22□□□□□ -2.05
CPSF7-220ENST00000541963 C10orf95Q9H7T3 257 aa2.22□□□□□ -2.05
CPSF7-220ENST00000541963 MT1XP80297 61 aa2.2□□□□□ -2.06
CPSF7-220ENST00000541963 OBSCNQ5VST9 7968 aa2.2□□□□□ -2.06
CPSF7-220ENST00000541963 NEBP20929 6669 aa2.19□□□□□ -2.06
CPSF7-220ENST00000541963 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
CPSF7-220ENST00000541963 LCE1BQ5T7P3 118 aa2.18□□□□□ -2.06
CPSF7-220ENST00000541963 MUC12Q9UKN1 5478 aa2.18□□□□□ -2.06
CPSF7-220ENST00000541963 KRTAP5-9P26371 169 aa2.17□□□□□ -2.06
CPSF7-220ENST00000541963 INE1O15225 51 aa2.15□□□□□ -2.07
CPSF7-220ENST00000541963 KRTAP8-1Q8IUC2 63 aa2.15□□□□□ -2.07
CPSF7-220ENST00000541963 KRTAP4-3Q9BYR4 195 aa2.15□□□□□ -2.07
CPSF7-220ENST00000541963 SPRR2FQ96RM1 72 aa2.13□□□□□ -2.07
CPSF7-220ENST00000541963 KMT2DO14686 5537 aa2.12□□□□□ -2.07
CPSF7-220ENST00000541963 SPRR2EP22531 72 aa2.1□□□□□ -2.07
CPSF7-220ENST00000541963 SPRR2BP35325 72 aa2.1□□□□□ -2.07
CPSF7-220ENST00000541963 SPRR2AP35326 72 aa2.1□□□□□ -2.07
CPSF7-220ENST00000541963 KRTAP20-1Q3LI63 56 aa2.1□□□□□ -2.07
CPSF7-220ENST00000541963 MDN1Q9NU22 5596 aa2.09□□□□□ -2.07
CPSF7-220ENST00000541963 TNP1P09430 55 aa2.09□□□□□ -2.07
CPSF7-220ENST00000541963 KRTAP2-3P0C7H8 128 aa2.07□□□□□ -2.08
CPSF7-220ENST00000541963 KRTAP2-4Q9BYR9 128 aa2.07□□□□□ -2.08
CPSF7-220ENST00000541963 SPRR2DP22532 72 aa2.03□□□□□ -2.08
CPSF7-220ENST00000541963 KRTAP12-3P60328 96 aa2.02□□□□□ -2.09
CPSF7-220ENST00000541963 KRTAP2-1Q9BYU5 128 aa2.01□□□□□ -2.09
CPSF7-220ENST00000541963 KRTAP19-7Q3SYF9 63 aa1.96□□□□□ -2.1
CPSF7-220ENST00000541963 MT1EP04732 61 aa1.95□□□□□ -2.1
CPSF7-220ENST00000541963 KRTAP19-5Q3LI72 72 aa1.94□□□□□ -2.1
CPSF7-220ENST00000541963 KRTAP19-3Q7Z4W3 81 aa1.94□□□□□ -2.1
CPSF7-220ENST00000541963 MT1GP13640 62 aa1.92□□□□□ -2.1
CPSF7-220ENST00000541963 KRTAP12-4P60329 112 aa1.92□□□□□ -2.1
CPSF7-220ENST00000541963 MT1LQ93083 61 aa1.87□□□□□ -2.11
CPSF7-220ENST00000541963 MT1MQ8N339 61 aa1.86□□□□□ -2.11
CPSF7-220ENST00000541963 DSTQ03001 7570 aaKnown RBP1.86□□□□□ -2.11
CPSF7-220ENST00000541963 GPR98Q8WXG9 6306 aa1.84□□□□□ -2.11
CPSF7-220ENST00000541963 KRTAP5-7Q6L8G8 165 aa1.78□□□□□ -2.12
CPSF7-220ENST00000541963 MT4P47944 62 aa1.76□□□□□ -2.13
CPSF7-220ENST00000541963 KRTAP5-2Q701N4 177 aa1.76□□□□□ -2.13
CPSF7-220ENST00000541963 HMCN1Q96RW7 5635 aa1.71□□□□□ -2.14
CPSF7-220ENST00000541963 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
CPSF7-220ENST00000541963 AHNAK2Q8IVF2 5795 aa1.66□□□□□ -2.14
CPSF7-220ENST00000541963 KRTAP20-2Q3LI61 65 aa1.65□□□□□ -2.15
CPSF7-220ENST00000541963 SYNE1Q8NF91 8797 aaKnown RBP1.64□□□□□ -2.15
CPSF7-220ENST00000541963 KRTAP5-10Q6L8G5 202 aa1.61□□□□□ -2.15
CPSF7-220ENST00000541963 MT1AP04731 61 aa1.6□□□□□ -2.15
CPSF7-220ENST00000541963 KRTAP6-1Q3LI64 71 aa1.57□□□□□ -2.16
CPSF7-220ENST00000541963 KRTAP6-2Q3LI66 62 aa1.5□□□□□ -2.17
CPSF7-220ENST00000541963 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
CPSF7-220ENST00000541963 KRTAP5-8O75690 187 aa1.44□□□□□ -2.18
CPSF7-220ENST00000541963 AHNAKQ09666 5890 aaKnown RBP1.41□□□□□ -2.18
CPSF7-220ENST00000541963 MUC5BQ9HC84 5762 aaPredicted RBP1.36□□□□□ -2.19
CPSF7-220ENST00000541963 MUC5ACP98088 5654 aa1.33□□□□□ -2.2
CPSF7-220ENST00000541963 PRM1P04553 51 aa1.28□□□□□ -2.2
CPSF7-220ENST00000541963 PHGR1C9JFL3 82 aa0.96□□□□□ -2.26
CPSF7-220ENST00000541963 KRTAP21-1Q3LI58 79 aa0.89□□□□□ -2.27
CPSF7-220ENST00000541963 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 8.8 ms