RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 SPRR2FQ96RM1 72 aa3.12□□□□□ -1.91
THBS3-210ENST00000541576 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.1□□□□□ -1.91
THBS3-210ENST00000541576 KRTAP9-7A8MTY7 169 aa3.08□□□□□ -1.92
THBS3-210ENST00000541576 MT1LQ93083 61 aa3.08□□□□□ -1.92
THBS3-210ENST00000541576 KRTAP5-9P26371 169 aa3.07□□□□□ -1.92
THBS3-210ENST00000541576 MDN1Q9NU22 5596 aa3.04□□□□□ -1.92
THBS3-210ENST00000541576 KRTAP19-4Q3LI73 84 aa3.04□□□□□ -1.92
THBS3-210ENST00000541576 LCE3CQ5T5A8 94 aa3.04□□□□□ -1.92
THBS3-210ENST00000541576 KRTAP19-3Q7Z4W3 81 aa3.03□□□□□ -1.92
THBS3-210ENST00000541576 KRTAP6-3Q3LI67 103 aa3.02□□□□□ -1.93
THBS3-210ENST00000541576 KRTAP4-7Q9BYR0 210 aa3.02□□□□□ -1.93
THBS3-210ENST00000541576 MT1GP13640 62 aa3□□□□□ -1.93
THBS3-210ENST00000541576 LCE5AQ5TCM9 118 aa2.98□□□□□ -1.93
THBS3-210ENST00000541576 DSTQ03001 7570 aaKnown RBP2.97□□□□□ -1.93
THBS3-210ENST00000541576 LCE1AQ5T7P2 110 aa2.97□□□□□ -1.93
THBS3-210ENST00000541576 MT1MQ8N339 61 aa2.97□□□□□ -1.93
THBS3-210ENST00000541576 SPRR2EP22531 72 aa2.95□□□□□ -1.94
THBS3-210ENST00000541576 SPRR2BP35325 72 aa2.95□□□□□ -1.94
THBS3-210ENST00000541576 SPRR2AP35326 72 aa2.95□□□□□ -1.94
THBS3-210ENST00000541576 KRTAP4-3Q9BYR4 195 aa2.94□□□□□ -1.94
THBS3-210ENST00000541576 KRTAP9-6A8MVA2 160 aa2.91□□□□□ -1.94
THBS3-210ENST00000541576 OBSCNQ5VST9 7968 aa2.88□□□□□ -1.95
THBS3-210ENST00000541576 NEBP20929 6669 aa2.87□□□□□ -1.95
THBS3-210ENST00000541576 SPRR2DP22532 72 aa2.84□□□□□ -1.95
THBS3-210ENST00000541576 LOC100996750A0A140TA64 210 aa2.83□□□□□ -1.96
THBS3-210ENST00000541576 SYNE1Q8NF91 8797 aaKnown RBP2.83□□□□□ -1.96
THBS3-210ENST00000541576 KRTAP2-3P0C7H8 128 aa2.75□□□□□ -1.97
THBS3-210ENST00000541576 KRTAP2-4Q9BYR9 128 aa2.75□□□□□ -1.97
THBS3-210ENST00000541576 KRTAP2-1Q9BYU5 128 aa2.75□□□□□ -1.97
THBS3-210ENST00000541576 LCE3BQ5TA77 95 aa2.73□□□□□ -1.97
THBS3-210ENST00000541576 KRTAP20-1Q3LI63 56 aa2.72□□□□□ -1.97
THBS3-210ENST00000541576 KRTAP12-4P60329 112 aa2.7□□□□□ -1.98
THBS3-210ENST00000541576 KRTAP5-5Q701N2 237 aaPredicted RBP2.67□□□□□ -1.98
THBS3-210ENST00000541576 MT1AP04731 61 aa2.62□□□□□ -1.99
THBS3-210ENST00000541576 KRTAP4-9Q9BYQ8 210 aa2.62□□□□□ -1.99
THBS3-210ENST00000541576 KRTAP6-1Q3LI64 71 aa2.6□□□□□ -1.99
THBS3-210ENST00000541576 KRTAP2-2Q9BYT5 123 aa2.59□□□□□ -1.99
THBS3-210ENST00000541576 KRTAP5-4Q6L8H1 288 aa2.56□□□□□ -2
THBS3-210ENST00000541576 LCE4AQ5TA78 99 aa2.51□□□□□ -2.01
THBS3-210ENST00000541576 KRTAP9-4Q9BYQ2 154 aa2.49□□□□□ -2.01
THBS3-210ENST00000541576 MT4P47944 62 aa2.47□□□□□ -2.01
THBS3-210ENST00000541576 HMCN1Q96RW7 5635 aa2.45□□□□□ -2.02
THBS3-210ENST00000541576 KRTAP4-6Q9BYQ5 205 aa2.45□□□□□ -2.02
THBS3-210ENST00000541576 PRM1P04553 51 aa2.43□□□□□ -2.02
THBS3-210ENST00000541576 LCE1DQ5T752 114 aa2.43□□□□□ -2.02
THBS3-210ENST00000541576 KRTAP6-2Q3LI66 62 aa2.4□□□□□ -2.03
THBS3-210ENST00000541576 KRTAP20-2Q3LI61 65 aa2.4□□□□□ -2.03
THBS3-210ENST00000541576 LCE1EQ5T753 118 aa2.39□□□□□ -2.03
THBS3-210ENST00000541576 MT3P25713 68 aa2.38□□□□□ -2.03
THBS3-210ENST00000541576 LCE3DQ9BYE3 92 aa2.36□□□□□ -2.03
THBS3-210ENST00000541576 GPR98Q8WXG9 6306 aa2.34□□□□□ -2.03
THBS3-210ENST00000541576 LCE3EQ5T5B0 92 aa2.32□□□□□ -2.04
THBS3-210ENST00000541576 KRTAP5-2Q701N4 177 aa2.32□□□□□ -2.04
THBS3-210ENST00000541576 KRTAP5-3Q6L8H2 238 aa2.3□□□□□ -2.04
THBS3-210ENST00000541576 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
THBS3-210ENST00000541576 LCE1FQ5T754 118 aa2.26□□□□□ -2.05
THBS3-210ENST00000541576 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
THBS3-210ENST00000541576 KRTAP5-10Q6L8G5 202 aa2.19□□□□□ -2.06
THBS3-210ENST00000541576 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
THBS3-210ENST00000541576 KRTAP4-11Q9BYQ6 195 aa2.09□□□□□ -2.08
THBS3-210ENST00000541576 AHNAKQ09666 5890 aaKnown RBP2.03□□□□□ -2.08
THBS3-210ENST00000541576 MUC5BQ9HC84 5762 aaPredicted RBP2.01□□□□□ -2.09
THBS3-210ENST00000541576 KRTAP5-1Q6L8H4 278 aa2□□□□□ -2.09
THBS3-210ENST00000541576 KRTAP5-8O75690 187 aa2□□□□□ -2.09
THBS3-210ENST00000541576 MUC5ACP98088 5654 aa2□□□□□ -2.09
THBS3-210ENST00000541576 LCE1BQ5T7P3 118 aa1.95□□□□□ -2.1
THBS3-210ENST00000541576 LCE1CQ5T751 118 aa1.92□□□□□ -2.1
THBS3-210ENST00000541576 KRTAP4-2Q9BYR5 136 aa1.92□□□□□ -2.1
THBS3-210ENST00000541576 KRTAP9-9Q9BYP9 154 aa1.87□□□□□ -2.11
THBS3-210ENST00000541576 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.79□□□□□ -2.12
THBS3-210ENST00000541576 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
THBS3-210ENST00000541576 KRTAP5-11Q6L8G4 156 aa1.7□□□□□ -2.14
THBS3-210ENST00000541576 KRTAP4-12Q9BQ66 201 aa1.64□□□□□ -2.15
THBS3-210ENST00000541576 KRTAP4-4Q9BYR3 166 aa1.59□□□□□ -2.15
THBS3-210ENST00000541576 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
THBS3-210ENST00000541576 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
THBS3-210ENST00000541576 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 83.4 ms