RNA–Protein interactions for RNA: ENST00000541359.1

LINC00943-207, long intergenic non-protein coding RNA 943, humanhuman

TSL 4

Gene LINC00943, Length 676 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-207ENST00000541359 K7ERS5 55 aa7.78□□□□□ -1.16
LINC00943-207ENST00000541359 KRTAP2-2Q9BYT5 123 aa7.74□□□□□ -1.17
LINC00943-207ENST00000541359 KRTAP2-1Q9BYU5 128 aa7.74□□□□□ -1.17
LINC00943-207ENST00000541359 LCE3BQ5TA77 95 aa7.73□□□□□ -1.17
LINC00943-207ENST00000541359 KRTAP25-1Q3LHN0 102 aa7.68□□□□□ -1.18
LINC00943-207ENST00000541359 MT1LQ93083 61 aa7.68□□□□□ -1.18
LINC00943-207ENST00000541359 MT1GP13640 62 aa7.65□□□□□ -1.18
LINC00943-207ENST00000541359 KRTAP12-3P60328 96 aa7.57□□□□□ -1.2
LINC00943-207ENST00000541359 MT1MQ8N339 61 aa7.57□□□□□ -1.2
LINC00943-207ENST00000541359 CDC42SE1Q9NRR8 79 aa7.55□□□□□ -1.2
LINC00943-207ENST00000541359 DSTQ03001 7570 aaKnown RBP7.53□□□□□ -1.2
LINC00943-207ENST00000541359 PP632Q6XCG6 107 aa7.53□□□□□ -1.2
LINC00943-207ENST00000541359 KRTAP23-1A1A580 65 aa7.43□□□□□ -1.22
LINC00943-207ENST00000541359 KRTAP4-3Q9BYR4 195 aa7.4□□□□□ -1.22
LINC00943-207ENST00000541359 ROMO1P60602 79 aa7.39□□□□□ -1.23
LINC00943-207ENST00000541359 KRTAP4-7Q9BYR0 210 aa7.32□□□□□ -1.24
LINC00943-207ENST00000541359 KRTAP15-1Q3LI76 137 aa7.17□□□□□ -1.26
LINC00943-207ENST00000541359 KRTAP19-4Q3LI73 84 aa7.12□□□□□ -1.27
LINC00943-207ENST00000541359 KRTAP4-9Q9BYQ8 210 aa7.12□□□□□ -1.27
LINC00943-207ENST00000541359 LCE4AQ5TA78 99 aa7.07□□□□□ -1.28
LINC00943-207ENST00000541359 KRTAP5-4Q6L8H1 288 aa7.06□□□□□ -1.28
LINC00943-207ENST00000541359 BRK1Q8WUW1 75 aa7.03□□□□□ -1.28
LINC00943-207ENST00000541359 LCE3CQ5T5A8 94 aa7.01□□□□□ -1.29
LINC00943-207ENST00000541359 LCE1DQ5T752 114 aa7.01□□□□□ -1.29
LINC00943-207ENST00000541359 KRTAP5-5Q701N2 237 aaPredicted RBP6.95□□□□□ -1.3
LINC00943-207ENST00000541359 MT4P47944 62 aa6.94□□□□□ -1.3
LINC00943-207ENST00000541359 KRTAP4-12Q9BQ66 201 aa6.91□□□□□ -1.3
LINC00943-207ENST00000541359 KRTAP9-9Q9BYP9 154 aa6.9□□□□□ -1.3
LINC00943-207ENST00000541359 KRTAP9-4Q9BYQ2 154 aa6.9□□□□□ -1.3
LINC00943-207ENST00000541359 HMCN1Q96RW7 5635 aa6.88□□□□□ -1.31
LINC00943-207ENST00000541359 KRTAP9-6A8MVA2 160 aa6.68□□□□□ -1.34
LINC00943-207ENST00000541359 GPR98Q8WXG9 6306 aa6.62□□□□□ -1.35
LINC00943-207ENST00000541359 KRTAP20-2Q3LI61 65 aa6.62□□□□□ -1.35
LINC00943-207ENST00000541359 SYNE1Q8NF91 8797 aaKnown RBP6.6□□□□□ -1.35
LINC00943-207ENST00000541359 SPRR5A0A1B0GTR4 108 aa6.6□□□□□ -1.35
LINC00943-207ENST00000541359 PMAIP1Q13794 54 aa6.6□□□□□ -1.35
LINC00943-207ENST00000541359 KRTAP12-4P60329 112 aa6.58□□□□□ -1.36
LINC00943-207ENST00000541359 AHNAK2Q8IVF2 5795 aa6.54□□□□□ -1.36
LINC00943-207ENST00000541359 MT1AP04731 61 aa6.52□□□□□ -1.37
LINC00943-207ENST00000541359 KRTAP6-1Q3LI64 71 aa6.48□□□□□ -1.37
LINC00943-207ENST00000541359 KRTAP5-3Q6L8H2 238 aa6.44□□□□□ -1.38
LINC00943-207ENST00000541359 KRTAP4-2Q9BYR5 136 aa6.4□□□□□ -1.38
LINC00943-207ENST00000541359 KRTAP5-10Q6L8G5 202 aa6.38□□□□□ -1.39
LINC00943-207ENST00000541359 PRO0628Q9UI54 55 aa6.38□□□□□ -1.39
LINC00943-207ENST00000541359 PRAC1Q96KF2 57 aa6.37□□□□□ -1.39
LINC00943-207ENST00000541359 KRTAP5-2Q701N4 177 aa6.25□□□□□ -1.41
LINC00943-207ENST00000541359 KRTAP6-2Q3LI66 62 aa6.11□□□□□ -1.43
LINC00943-207ENST00000541359 KRTAP4-11Q9BYQ6 195 aa6.11□□□□□ -1.43
LINC00943-207ENST00000541359 KRTAP5-7Q6L8G8 165 aa6.07□□□□□ -1.44
LINC00943-207ENST00000541359 KTN1-AS1Q86SY8 53 aa6.04□□□□□ -1.44
LINC00943-207ENST00000541359 MT3P25713 68 aa5.92□□□□□ -1.46
LINC00943-207ENST00000541359 KRTAP5-8O75690 187 aa5.78□□□□□ -1.48
LINC00943-207ENST00000541359 OBSCNQ5VST9 7968 aa5.7□□□□□ -1.5
LINC00943-207ENST00000541359 SVIPQ8NHG7 77 aa5.7□□□□□ -1.5
LINC00943-207ENST00000541359 KRTAP5-1Q6L8H4 278 aa5.55□□□□□ -1.52
LINC00943-207ENST00000541359 MUC5ACP98088 5654 aa5.41□□□□□ -1.54
LINC00943-207ENST00000541359 LCE1EQ5T753 118 aa5.38□□□□□ -1.55
LINC00943-207ENST00000541359 MUC5BQ9HC84 5762 aaPredicted RBP5.31□□□□□ -1.56
LINC00943-207ENST00000541359 AHNAKQ09666 5890 aaKnown RBP5.26□□□□□ -1.57
LINC00943-207ENST00000541359 LUZP6Q538Z0 58 aa5.21□□□□□ -1.58
LINC00943-207ENST00000541359 LCE3DQ9BYE3 92 aa5.08□□□□□ -1.6
LINC00943-207ENST00000541359 LCE1BQ5T7P3 118 aa5.01□□□□□ -1.61
LINC00943-207ENST00000541359 LCE1CQ5T751 118 aa5□□□□□ -1.61
LINC00943-207ENST00000541359 LCE3EQ5T5B0 92 aa4.84□□□□□ -1.63
LINC00943-207ENST00000541359 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.62□□□□□ -1.67
LINC00943-207ENST00000541359 KRTAP5-11Q6L8G4 156 aa4.52□□□□□ -1.69
LINC00943-207ENST00000541359 NDUFAF8A1L188 74 aa4.49□□□□□ -1.69
LINC00943-207ENST00000541359 LCE1FQ5T754 118 aa4.29□□□□□ -1.72
LINC00943-207ENST00000541359 KRTAP21-2Q3LI59 83 aa4.28□□□□□ -1.72
LINC00943-207ENST00000541359 H3BS24 57 aa4.03□□□□□ -1.76
LINC00943-207ENST00000541359 PHGR1C9JFL3 82 aa3.89□□□□□ -1.79
LINC00943-207ENST00000541359 KRTAP4-4Q9BYR3 166 aa3.85□□□□□ -1.79
LINC00943-207ENST00000541359 PRM1P04553 51 aa3.81□□□□□ -1.8
LINC00943-207ENST00000541359 INE1O15225 51 aa3.63□□□□□ -1.83
LINC00943-207ENST00000541359 A0A0A0MQY5 61 aa3.59□□□□□ -1.83
LINC00943-207ENST00000541359 MUC19Q7Z5P9 8384 aa3.49□□□□□ -1.85
LINC00943-207ENST00000541359 KRTAP21-1Q3LI58 79 aa2.76□□□□□ -1.97
LINC00943-207ENST00000541359 MUC16Q8WXI7 14507 aa2.53□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 112.5 ms