RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 LCE3AQ5TA76 89 aa5.27□□□□□ -1.57
LTBR-209ENST00000541102 CDC42SE1Q9NRR8 79 aa5.25□□□□□ -1.57
LTBR-209ENST00000541102 KRTAP19-5Q3LI72 72 aa5.24□□□□□ -1.57
LTBR-209ENST00000541102 LCE5AQ5TCM9 118 aa5.23□□□□□ -1.57
LTBR-209ENST00000541102 KRTAP19-3Q7Z4W3 81 aa5.23□□□□□ -1.57
LTBR-209ENST00000541102 KRTAP25-1Q3LHN0 102 aa5.15□□□□□ -1.59
LTBR-209ENST00000541102 MT1GP13640 62 aa5.11□□□□□ -1.59
LTBR-209ENST00000541102 DSTQ03001 7570 aaKnown RBP5.09□□□□□ -1.59
LTBR-209ENST00000541102 ROMO1P60602 79 aa5.07□□□□□ -1.6
LTBR-209ENST00000541102 PP632Q6XCG6 107 aa5.07□□□□□ -1.6
LTBR-209ENST00000541102 MT1LQ93083 61 aa5.05□□□□□ -1.6
LTBR-209ENST00000541102 KRTAP12-3P60328 96 aa5.03□□□□□ -1.6
LTBR-209ENST00000541102 MT1MQ8N339 61 aa5.03□□□□□ -1.6
LTBR-209ENST00000541102 KRTAP4-9Q9BYQ8 210 aa5.03□□□□□ -1.6
LTBR-209ENST00000541102 BRK1Q8WUW1 75 aa5.01□□□□□ -1.61
LTBR-209ENST00000541102 KRTAP4-3Q9BYR4 195 aa4.95□□□□□ -1.62
LTBR-209ENST00000541102 KRTAP23-1A1A580 65 aa4.94□□□□□ -1.62
LTBR-209ENST00000541102 LCE1DQ5T752 114 aa4.88□□□□□ -1.63
LTBR-209ENST00000541102 KRTAP4-7Q9BYR0 210 aa4.88□□□□□ -1.63
LTBR-209ENST00000541102 LCE4AQ5TA78 99 aa4.87□□□□□ -1.63
LTBR-209ENST00000541102 MT4P47944 62 aa4.86□□□□□ -1.63
LTBR-209ENST00000541102 GPR98Q8WXG9 6306 aa4.86□□□□□ -1.63
LTBR-209ENST00000541102 KRTAP15-1Q3LI76 137 aa4.79□□□□□ -1.64
LTBR-209ENST00000541102 KRTAP5-4Q6L8H1 288 aa4.76□□□□□ -1.65
LTBR-209ENST00000541102 KRTAP4-12Q9BQ66 201 aa4.76□□□□□ -1.65
LTBR-209ENST00000541102 HMCN1Q96RW7 5635 aa4.76□□□□□ -1.65
LTBR-209ENST00000541102 PMAIP1Q13794 54 aa4.71□□□□□ -1.66
LTBR-209ENST00000541102 LCE3CQ5T5A8 94 aa4.67□□□□□ -1.66
LTBR-209ENST00000541102 KRTAP19-4Q3LI73 84 aa4.63□□□□□ -1.67
LTBR-209ENST00000541102 AHNAK2Q8IVF2 5795 aa4.63□□□□□ -1.67
LTBR-209ENST00000541102 PRO0628Q9UI54 55 aa4.61□□□□□ -1.67
LTBR-209ENST00000541102 KRTAP9-9Q9BYP9 154 aa4.6□□□□□ -1.67
LTBR-209ENST00000541102 KRTAP9-4Q9BYQ2 154 aa4.6□□□□□ -1.67
LTBR-209ENST00000541102 KRTAP5-5Q701N2 237 aaPredicted RBP4.58□□□□□ -1.68
LTBR-209ENST00000541102 PRAC1Q96KF2 57 aa4.56□□□□□ -1.68
LTBR-209ENST00000541102 H3BS24 57 aa4.52□□□□□ -1.69
LTBR-209ENST00000541102 KRTAP20-2Q3LI61 65 aa4.51□□□□□ -1.69
LTBR-209ENST00000541102 KRTAP12-4P60329 112 aa4.5□□□□□ -1.69
LTBR-209ENST00000541102 KRTAP5-10Q6L8G5 202 aa4.5□□□□□ -1.69
LTBR-209ENST00000541102 KRTAP9-6A8MVA2 160 aa4.49□□□□□ -1.69
LTBR-209ENST00000541102 SPRR5A0A1B0GTR4 108 aa4.48□□□□□ -1.69
LTBR-209ENST00000541102 SYNE1Q8NF91 8797 aaKnown RBP4.46□□□□□ -1.7
LTBR-209ENST00000541102 KRTAP5-3Q6L8H2 238 aa4.42□□□□□ -1.7
LTBR-209ENST00000541102 KTN1-AS1Q86SY8 53 aa4.34□□□□□ -1.71
LTBR-209ENST00000541102 KRTAP5-7Q6L8G8 165 aa4.32□□□□□ -1.72
LTBR-209ENST00000541102 MT1AP04731 61 aa4.29□□□□□ -1.72
LTBR-209ENST00000541102 KRTAP6-1Q3LI64 71 aa4.28□□□□□ -1.72
LTBR-209ENST00000541102 KRTAP5-2Q701N4 177 aa4.17□□□□□ -1.74
LTBR-209ENST00000541102 KRTAP4-2Q9BYR5 136 aa4.15□□□□□ -1.75
LTBR-209ENST00000541102 KRTAP4-11Q9BYQ6 195 aa4.12□□□□□ -1.75
LTBR-209ENST00000541102 KRTAP6-2Q3LI66 62 aa4.09□□□□□ -1.75
LTBR-209ENST00000541102 KRTAP5-8O75690 187 aa3.97□□□□□ -1.77
LTBR-209ENST00000541102 MT3P25713 68 aa3.94□□□□□ -1.78
LTBR-209ENST00000541102 AHNAKQ09666 5890 aaKnown RBP3.84□□□□□ -1.8
LTBR-209ENST00000541102 OBSCNQ5VST9 7968 aa3.83□□□□□ -1.8
LTBR-209ENST00000541102 MUC5ACP98088 5654 aa3.78□□□□□ -1.8
LTBR-209ENST00000541102 MUC5BQ9HC84 5762 aaPredicted RBP3.78□□□□□ -1.81
LTBR-209ENST00000541102 KRTAP5-1Q6L8H4 278 aa3.74□□□□□ -1.81
LTBR-209ENST00000541102 LUZP6Q538Z0 58 aa3.64□□□□□ -1.83
LTBR-209ENST00000541102 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
LTBR-209ENST00000541102 LCE1BQ5T7P3 118 aa3.44□□□□□ -1.86
LTBR-209ENST00000541102 LCE3DQ9BYE3 92 aa3.4□□□□□ -1.87
LTBR-209ENST00000541102 A0A0A0MQY5 61 aa3.36□□□□□ -1.87
LTBR-209ENST00000541102 NDUFAF8A1L188 74 aa3.32□□□□□ -1.88
LTBR-209ENST00000541102 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
LTBR-209ENST00000541102 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
LTBR-209ENST00000541102 KRTAP5-11Q6L8G4 156 aa3□□□□□ -1.93
LTBR-209ENST00000541102 KRTAP5-6Q6L8G9 129 aaPredicted RBP3□□□□□ -1.93
LTBR-209ENST00000541102 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
LTBR-209ENST00000541102 INE1O15225 51 aa2.82□□□□□ -1.96
LTBR-209ENST00000541102 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
LTBR-209ENST00000541102 PHGR1C9JFL3 82 aa2.65□□□□□ -1.99
LTBR-209ENST00000541102 PRM1P04553 51 aa2.64□□□□□ -1.99
LTBR-209ENST00000541102 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
LTBR-209ENST00000541102 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
LTBR-209ENST00000541102 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
LTBR-209ENST00000541102 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 111.7 ms