RNA–Protein interactions for RNA: ENST00000540951.1

CADM1-210, Transcript of cell adhesion molecule 1, humanhuman

TSL 3

Gene CADM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-210ENST00000540951 KRTAP12-3P60328 96 aa7.03□□□□□ -1.28
CADM1-210ENST00000540951 MT1LQ93083 61 aa6.96□□□□□ -1.3
CADM1-210ENST00000540951 KRTAP19-3Q7Z4W3 81 aa6.95□□□□□ -1.3
CADM1-210ENST00000540951 PP632Q6XCG6 107 aa6.93□□□□□ -1.3
CADM1-210ENST00000540951 LCE5AQ5TCM9 118 aa6.92□□□□□ -1.3
CADM1-210ENST00000540951 PRAC1Q96KF2 57 aa6.81□□□□□ -1.32
CADM1-210ENST00000540951 MT1GP13640 62 aa6.8□□□□□ -1.32
CADM1-210ENST00000540951 SPRR2DP22532 72 aa6.8□□□□□ -1.32
CADM1-210ENST00000540951 MT1MQ8N339 61 aa6.79□□□□□ -1.32
CADM1-210ENST00000540951 KRTAP15-1Q3LI76 137 aa6.76□□□□□ -1.33
CADM1-210ENST00000540951 KRTAP4-7Q9BYR0 210 aa6.71□□□□□ -1.34
CADM1-210ENST00000540951 KRTAP4-3Q9BYR4 195 aa6.68□□□□□ -1.34
CADM1-210ENST00000540951 KTN1-AS1Q86SY8 53 aa6.66□□□□□ -1.34
CADM1-210ENST00000540951 KRTAP20-1Q3LI63 56 aa6.63□□□□□ -1.35
CADM1-210ENST00000540951 KRTAP2-3P0C7H8 128 aa6.59□□□□□ -1.35
CADM1-210ENST00000540951 KRTAP2-4Q9BYR9 128 aa6.59□□□□□ -1.35
CADM1-210ENST00000540951 LCE3BQ5TA77 95 aa6.58□□□□□ -1.36
CADM1-210ENST00000540951 LCE3CQ5T5A8 94 aa6.54□□□□□ -1.36
CADM1-210ENST00000540951 KRTAP19-4Q3LI73 84 aa6.53□□□□□ -1.36
CADM1-210ENST00000540951 DSTQ03001 7570 aaKnown RBP6.52□□□□□ -1.37
CADM1-210ENST00000540951 KRTAP2-2Q9BYT5 123 aa6.42□□□□□ -1.38
CADM1-210ENST00000540951 KRTAP2-1Q9BYU5 128 aa6.42□□□□□ -1.38
CADM1-210ENST00000540951 LOC100996750A0A140TA64 210 aa6.32□□□□□ -1.4
CADM1-210ENST00000540951 KRTAP9-6A8MVA2 160 aa6.3□□□□□ -1.4
CADM1-210ENST00000540951 SVIPQ8NHG7 77 aa6.24□□□□□ -1.41
CADM1-210ENST00000540951 KRTAP5-5Q701N2 237 aaPredicted RBP6.21□□□□□ -1.42
CADM1-210ENST00000540951 KRTAP5-4Q6L8H1 288 aa6.14□□□□□ -1.43
CADM1-210ENST00000540951 SPRR5A0A1B0GTR4 108 aa6.11□□□□□ -1.43
CADM1-210ENST00000540951 LCE4AQ5TA78 99 aa6.03□□□□□ -1.44
CADM1-210ENST00000540951 KRTAP4-9Q9BYQ8 210 aa6.01□□□□□ -1.45
CADM1-210ENST00000540951 LCE1DQ5T752 114 aa5.95□□□□□ -1.46
CADM1-210ENST00000540951 MT4P47944 62 aa5.92□□□□□ -1.46
CADM1-210ENST00000540951 MT1AP04731 61 aa5.91□□□□□ -1.46
CADM1-210ENST00000540951 SYNE1Q8NF91 8797 aaKnown RBP5.9□□□□□ -1.47
CADM1-210ENST00000540951 KRTAP6-1Q3LI64 71 aa5.89□□□□□ -1.47
CADM1-210ENST00000540951 KRTAP4-6Q9BYQ5 205 aa5.89□□□□□ -1.47
CADM1-210ENST00000540951 HMCN1Q96RW7 5635 aa5.88□□□□□ -1.47
CADM1-210ENST00000540951 KRTAP20-2Q3LI61 65 aa5.73□□□□□ -1.49
CADM1-210ENST00000540951 KRTAP12-4P60329 112 aa5.71□□□□□ -1.5
CADM1-210ENST00000540951 KRTAP9-4Q9BYQ2 154 aa5.62□□□□□ -1.51
CADM1-210ENST00000540951 KRTAP5-3Q6L8H2 238 aa5.57□□□□□ -1.52
CADM1-210ENST00000540951 KRTAP5-2Q701N4 177 aa5.5□□□□□ -1.53
CADM1-210ENST00000540951 AHNAK2Q8IVF2 5795 aa5.49□□□□□ -1.53
CADM1-210ENST00000540951 KRTAP6-2Q3LI66 62 aa5.47□□□□□ -1.53
CADM1-210ENST00000540951 LUZP6Q538Z0 58 aa5.4□□□□□ -1.54
CADM1-210ENST00000540951 MT3P25713 68 aa5.3□□□□□ -1.56
CADM1-210ENST00000540951 GPR98Q8WXG9 6306 aa5.25□□□□□ -1.57
CADM1-210ENST00000540951 KRTAP5-10Q6L8G5 202 aa5.24□□□□□ -1.57
CADM1-210ENST00000540951 NDUFAF8A1L188 74 aa5.06□□□□□ -1.6
CADM1-210ENST00000540951 KRTAP4-11Q9BYQ6 195 aa5.05□□□□□ -1.6
CADM1-210ENST00000540951 OBSCNQ5VST9 7968 aa4.97□□□□□ -1.61
CADM1-210ENST00000540951 KRTAP5-8O75690 187 aa4.92□□□□□ -1.62
CADM1-210ENST00000540951 KRTAP5-7Q6L8G8 165 aa4.91□□□□□ -1.62
CADM1-210ENST00000540951 KRTAP5-1Q6L8H4 278 aa4.82□□□□□ -1.64
CADM1-210ENST00000540951 LCE3DQ9BYE3 92 aa4.79□□□□□ -1.64
CADM1-210ENST00000540951 LCE1EQ5T753 118 aa4.74□□□□□ -1.65
CADM1-210ENST00000540951 MUC5ACP98088 5654 aa4.72□□□□□ -1.65
CADM1-210ENST00000540951 LCE3EQ5T5B0 92 aa4.61□□□□□ -1.67
CADM1-210ENST00000540951 KRTAP4-2Q9BYR5 136 aa4.54□□□□□ -1.68
CADM1-210ENST00000540951 KRTAP9-9Q9BYP9 154 aa4.43□□□□□ -1.7
CADM1-210ENST00000540951 LCE1CQ5T751 118 aa4.42□□□□□ -1.7
CADM1-210ENST00000540951 LCE1BQ5T7P3 118 aa4.42□□□□□ -1.7
CADM1-210ENST00000540951 MUC5BQ9HC84 5762 aaPredicted RBP4.4□□□□□ -1.71
CADM1-210ENST00000540951 AHNAKQ09666 5890 aaKnown RBP4.29□□□□□ -1.72
CADM1-210ENST00000540951 A0A0A0MQY5 61 aa4.18□□□□□ -1.74
CADM1-210ENST00000540951 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.13□□□□□ -1.75
CADM1-210ENST00000540951 INE1O15225 51 aa4.09□□□□□ -1.75
CADM1-210ENST00000540951 KRTAP5-11Q6L8G4 156 aa3.98□□□□□ -1.77
CADM1-210ENST00000540951 KRTAP21-2Q3LI59 83 aa3.88□□□□□ -1.79
CADM1-210ENST00000540951 H3BS24 57 aa3.86□□□□□ -1.79
CADM1-210ENST00000540951 KRTAP4-12Q9BQ66 201 aa3.86□□□□□ -1.79
CADM1-210ENST00000540951 PRM1P04553 51 aa3.84□□□□□ -1.79
CADM1-210ENST00000540951 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
CADM1-210ENST00000540951 KRTAP4-4Q9BYR3 166 aa3.47□□□□□ -1.85
CADM1-210ENST00000540951 PHGR1C9JFL3 82 aa3.41□□□□□ -1.86
CADM1-210ENST00000540951 MUC19Q7Z5P9 8384 aa3.04□□□□□ -1.92
CADM1-210ENST00000540951 KRTAP21-1Q3LI58 79 aa2.28□□□□□ -2.04
CADM1-210ENST00000540951 MUC16Q8WXI7 14507 aa2.25□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms