RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 PCP4P48539 62 aa5.87□□□□□ -1.47
TRIM65-203ENST00000540812 MT4P47944 62 aa5.83□□□□□ -1.48
TRIM65-203ENST00000540812 MIR22HGQ0VDD5 57 aa5.82□□□□□ -1.48
TRIM65-203ENST00000540812 LCE4AQ5TA78 99 aa5.82□□□□□ -1.48
TRIM65-203ENST00000540812 PSPHP1O15172 72 aa5.81□□□□□ -1.48
TRIM65-203ENST00000540812 MT1MQ8N339 61 aa5.81□□□□□ -1.48
TRIM65-203ENST00000540812 PP632Q6XCG6 107 aa5.8□□□□□ -1.48
TRIM65-203ENST00000540812 C10orf95Q9H7T3 257 aa5.79□□□□□ -1.48
TRIM65-203ENST00000540812 RPS28P62857 69 aaKnown RBP5.78□□□□□ -1.48
TRIM65-203ENST00000540812 MT1LQ93083 61 aa5.76□□□□□ -1.49
TRIM65-203ENST00000540812 TNP1P09430 55 aa5.75□□□□□ -1.49
TRIM65-203ENST00000540812 KRTAP4-3Q9BYR4 195 aa5.72□□□□□ -1.49
TRIM65-203ENST00000540812 KRTAP5-4Q6L8H1 288 aa5.69□□□□□ -1.5
TRIM65-203ENST00000540812 K7ERS5 55 aa5.68□□□□□ -1.5
TRIM65-203ENST00000540812 KRTAP5-10Q6L8G5 202 aa5.65□□□□□ -1.5
TRIM65-203ENST00000540812 KRTAP4-6Q9BYQ5 205 aa5.65□□□□□ -1.5
TRIM65-203ENST00000540812 A6NED7 52 aa5.64□□□□□ -1.51
TRIM65-203ENST00000540812 LCE3AQ5TA76 89 aa5.63□□□□□ -1.51
TRIM65-203ENST00000540812 KRTAP25-1Q3LHN0 102 aa5.54□□□□□ -1.52
TRIM65-203ENST00000540812 KRTAP4-7Q9BYR0 210 aa5.5□□□□□ -1.53
TRIM65-203ENST00000540812 KRTAP5-7Q6L8G8 165 aa5.45□□□□□ -1.54
TRIM65-203ENST00000540812 KRTAP5-3Q6L8H2 238 aa5.45□□□□□ -1.54
TRIM65-203ENST00000540812 CDC42SE1Q9NRR8 79 aa5.44□□□□□ -1.54
TRIM65-203ENST00000540812 KRTAP12-3P60328 96 aa5.43□□□□□ -1.54
TRIM65-203ENST00000540812 KRTAP20-2Q3LI61 65 aa5.4□□□□□ -1.54
TRIM65-203ENST00000540812 KRTAP23-1A1A580 65 aa5.38□□□□□ -1.55
TRIM65-203ENST00000540812 SYNE1Q8NF91 8797 aaKnown RBP5.36□□□□□ -1.55
TRIM65-203ENST00000540812 KRTAP5-5Q701N2 237 aaPredicted RBP5.35□□□□□ -1.55
TRIM65-203ENST00000540812 ROMO1P60602 79 aa5.33□□□□□ -1.56
TRIM65-203ENST00000540812 SPRR5A0A1B0GTR4 108 aa5.31□□□□□ -1.56
TRIM65-203ENST00000540812 KRTAP12-4P60329 112 aa5.24□□□□□ -1.57
TRIM65-203ENST00000540812 LOC100996750A0A140TA64 210 aa5.23□□□□□ -1.57
TRIM65-203ENST00000540812 KRTAP19-4Q3LI73 84 aa5.2□□□□□ -1.58
TRIM65-203ENST00000540812 KRTAP15-1Q3LI76 137 aa5.15□□□□□ -1.59
TRIM65-203ENST00000540812 BRK1Q8WUW1 75 aa5.06□□□□□ -1.6
TRIM65-203ENST00000540812 LCE3CQ5T5A8 94 aa5.02□□□□□ -1.61
TRIM65-203ENST00000540812 KRTAP4-11Q9BYQ6 195 aa4.98□□□□□ -1.61
TRIM65-203ENST00000540812 KRTAP5-2Q701N4 177 aa4.94□□□□□ -1.62
TRIM65-203ENST00000540812 AHNAKQ09666 5890 aaKnown RBP4.92□□□□□ -1.62
TRIM65-203ENST00000540812 KRTAP6-1Q3LI64 71 aa4.91□□□□□ -1.62
TRIM65-203ENST00000540812 MT1AP04731 61 aa4.89□□□□□ -1.63
TRIM65-203ENST00000540812 MUC5BQ9HC84 5762 aaPredicted RBP4.87□□□□□ -1.63
TRIM65-203ENST00000540812 KRTAP5-8O75690 187 aa4.83□□□□□ -1.64
TRIM65-203ENST00000540812 MUC5ACP98088 5654 aa4.82□□□□□ -1.64
TRIM65-203ENST00000540812 PMAIP1Q13794 54 aa4.79□□□□□ -1.64
TRIM65-203ENST00000540812 KRTAP9-4Q9BYQ2 154 aa4.75□□□□□ -1.65
TRIM65-203ENST00000540812 KRTAP6-2Q3LI66 62 aa4.73□□□□□ -1.65
TRIM65-203ENST00000540812 OBSCNQ5VST9 7968 aa4.71□□□□□ -1.66
TRIM65-203ENST00000540812 KRTAP9-6A8MVA2 160 aa4.71□□□□□ -1.66
TRIM65-203ENST00000540812 KRTAP9-9Q9BYP9 154 aa4.61□□□□□ -1.67
TRIM65-203ENST00000540812 PRO0628Q9UI54 55 aa4.61□□□□□ -1.67
TRIM65-203ENST00000540812 PRAC1Q96KF2 57 aa4.53□□□□□ -1.68
TRIM65-203ENST00000540812 KRTAP5-1Q6L8H4 278 aa4.49□□□□□ -1.69
TRIM65-203ENST00000540812 MT3P25713 68 aa4.47□□□□□ -1.69
TRIM65-203ENST00000540812 KTN1-AS1Q86SY8 53 aa4.36□□□□□ -1.71
TRIM65-203ENST00000540812 LCE1EQ5T753 118 aa4.15□□□□□ -1.75
TRIM65-203ENST00000540812 SVIPQ8NHG7 77 aa4.12□□□□□ -1.75
TRIM65-203ENST00000540812 KRTAP4-2Q9BYR5 136 aa4□□□□□ -1.77
TRIM65-203ENST00000540812 LCE1BQ5T7P3 118 aa3.98□□□□□ -1.77
TRIM65-203ENST00000540812 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
TRIM65-203ENST00000540812 LUZP6Q538Z0 58 aa3.84□□□□□ -1.79
TRIM65-203ENST00000540812 KRTAP4-12Q9BQ66 201 aa3.74□□□□□ -1.81
TRIM65-203ENST00000540812 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
TRIM65-203ENST00000540812 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
TRIM65-203ENST00000540812 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.49□□□□□ -1.85
TRIM65-203ENST00000540812 LCE3EQ5T5B0 92 aa3.48□□□□□ -1.85
TRIM65-203ENST00000540812 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
TRIM65-203ENST00000540812 PHGR1C9JFL3 82 aa3.29□□□□□ -1.88
TRIM65-203ENST00000540812 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
TRIM65-203ENST00000540812 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
TRIM65-203ENST00000540812 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
TRIM65-203ENST00000540812 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
TRIM65-203ENST00000540812 PRM1P04553 51 aa2.72□□□□□ -1.97
TRIM65-203ENST00000540812 A0A0A0MQY5 61 aa2.67□□□□□ -1.98
TRIM65-203ENST00000540812 INE1O15225 51 aa2.66□□□□□ -1.98
TRIM65-203ENST00000540812 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
TRIM65-203ENST00000540812 MUC16Q8WXI7 14507 aa2.16□□□□□ -2.06
TRIM65-203ENST00000540812 H3BS24 57 aa1.61□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 13 ms