RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 BRK1Q8WUW1 75 aa5.78□□□□□ -1.48
DDB1-218ENST00000540784 LCE3AQ5TA76 89 aa5.77□□□□□ -1.49
DDB1-218ENST00000540784 KRTAP19-5Q3LI72 72 aa5.75□□□□□ -1.49
DDB1-218ENST00000540784 MT1EP04732 61 aa5.72□□□□□ -1.49
DDB1-218ENST00000540784 LUZP6Q538Z0 58 aa5.7□□□□□ -1.5
DDB1-218ENST00000540784 ROMO1P60602 79 aa5.67□□□□□ -1.5
DDB1-218ENST00000540784 SPRR2DP22532 72 aa5.66□□□□□ -1.5
DDB1-218ENST00000540784 KRTAP20-1Q3LI63 56 aa5.65□□□□□ -1.5
DDB1-218ENST00000540784 KRTAP2-3P0C7H8 128 aa5.62□□□□□ -1.51
DDB1-218ENST00000540784 KRTAP2-4Q9BYR9 128 aa5.62□□□□□ -1.51
DDB1-218ENST00000540784 KRTAP19-3Q7Z4W3 81 aa5.61□□□□□ -1.51
DDB1-218ENST00000540784 KRTAP12-3P60328 96 aa5.58□□□□□ -1.52
DDB1-218ENST00000540784 LCE5AQ5TCM9 118 aa5.58□□□□□ -1.52
DDB1-218ENST00000540784 MT1GP13640 62 aa5.55□□□□□ -1.52
DDB1-218ENST00000540784 MT1LQ93083 61 aa5.52□□□□□ -1.53
DDB1-218ENST00000540784 KRTAP19-4Q3LI73 84 aa5.5□□□□□ -1.53
DDB1-218ENST00000540784 PP632Q6XCG6 107 aa5.5□□□□□ -1.53
DDB1-218ENST00000540784 LCE3BQ5TA77 95 aa5.48□□□□□ -1.53
DDB1-218ENST00000540784 NDUFAF8A1L188 74 aa5.46□□□□□ -1.54
DDB1-218ENST00000540784 KRTAP2-2Q9BYT5 123 aa5.46□□□□□ -1.54
DDB1-218ENST00000540784 KRTAP2-1Q9BYU5 128 aa5.46□□□□□ -1.54
DDB1-218ENST00000540784 MT1MQ8N339 61 aa5.43□□□□□ -1.54
DDB1-218ENST00000540784 DSTQ03001 7570 aaKnown RBP5.36□□□□□ -1.55
DDB1-218ENST00000540784 KRTAP15-1Q3LI76 137 aa5.34□□□□□ -1.55
DDB1-218ENST00000540784 KRTAP4-3Q9BYR4 195 aa5.29□□□□□ -1.56
DDB1-218ENST00000540784 KRTAP4-7Q9BYR0 210 aa5.28□□□□□ -1.56
DDB1-218ENST00000540784 LCE3CQ5T5A8 94 aa5.17□□□□□ -1.58
DDB1-218ENST00000540784 LCE4AQ5TA78 99 aa5.02□□□□□ -1.61
DDB1-218ENST00000540784 KRTAP4-9Q9BYQ8 210 aa5.01□□□□□ -1.61
DDB1-218ENST00000540784 LOC100996750A0A140TA64 210 aa4.99□□□□□ -1.61
DDB1-218ENST00000540784 KRTAP5-4Q6L8H1 288 aa4.97□□□□□ -1.61
DDB1-218ENST00000540784 MT4P47944 62 aa4.93□□□□□ -1.62
DDB1-218ENST00000540784 LCE1DQ5T752 114 aa4.92□□□□□ -1.62
DDB1-218ENST00000540784 KRTAP5-5Q701N2 237 aaPredicted RBP4.92□□□□□ -1.62
DDB1-218ENST00000540784 KRTAP9-6A8MVA2 160 aa4.83□□□□□ -1.64
DDB1-218ENST00000540784 KRTAP4-6Q9BYQ5 205 aa4.81□□□□□ -1.64
DDB1-218ENST00000540784 HMCN1Q96RW7 5635 aa4.79□□□□□ -1.64
DDB1-218ENST00000540784 KRTAP12-4P60329 112 aa4.77□□□□□ -1.65
DDB1-218ENST00000540784 MT1AP04731 61 aa4.71□□□□□ -1.66
DDB1-218ENST00000540784 SYNE1Q8NF91 8797 aaKnown RBP4.71□□□□□ -1.66
DDB1-218ENST00000540784 SPRR5A0A1B0GTR4 108 aa4.7□□□□□ -1.66
DDB1-218ENST00000540784 KRTAP20-2Q3LI61 65 aa4.67□□□□□ -1.66
DDB1-218ENST00000540784 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
DDB1-218ENST00000540784 KRTAP6-1Q3LI64 71 aa4.66□□□□□ -1.66
DDB1-218ENST00000540784 GPR98Q8WXG9 6306 aa4.58□□□□□ -1.68
DDB1-218ENST00000540784 KRTAP5-3Q6L8H2 238 aa4.52□□□□□ -1.69
DDB1-218ENST00000540784 AHNAK2Q8IVF2 5795 aa4.51□□□□□ -1.69
DDB1-218ENST00000540784 MT3P25713 68 aa4.47□□□□□ -1.69
DDB1-218ENST00000540784 KRTAP9-9Q9BYP9 154 aa4.44□□□□□ -1.7
DDB1-218ENST00000540784 KRTAP6-2Q3LI66 62 aa4.4□□□□□ -1.71
DDB1-218ENST00000540784 KRTAP5-2Q701N4 177 aa4.4□□□□□ -1.71
DDB1-218ENST00000540784 KRTAP5-10Q6L8G5 202 aa4.37□□□□□ -1.71
DDB1-218ENST00000540784 INE1O15225 51 aa4.33□□□□□ -1.72
DDB1-218ENST00000540784 KRTAP4-11Q9BYQ6 195 aa4.2□□□□□ -1.74
DDB1-218ENST00000540784 KRTAP5-7Q6L8G8 165 aa4.17□□□□□ -1.74
DDB1-218ENST00000540784 OBSCNQ5VST9 7968 aa4.09□□□□□ -1.76
DDB1-218ENST00000540784 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
DDB1-218ENST00000540784 KRTAP5-8O75690 187 aa4.03□□□□□ -1.76
DDB1-218ENST00000540784 KRTAP4-12Q9BQ66 201 aa3.91□□□□□ -1.78
DDB1-218ENST00000540784 KRTAP5-1Q6L8H4 278 aa3.89□□□□□ -1.79
DDB1-218ENST00000540784 LCE1EQ5T753 118 aa3.88□□□□□ -1.79
DDB1-218ENST00000540784 LCE3DQ9BYE3 92 aa3.81□□□□□ -1.8
DDB1-218ENST00000540784 MUC5ACP98088 5654 aa3.78□□□□□ -1.8
DDB1-218ENST00000540784 AHNAKQ09666 5890 aaKnown RBP3.64□□□□□ -1.83
DDB1-218ENST00000540784 MUC5BQ9HC84 5762 aaPredicted RBP3.64□□□□□ -1.83
DDB1-218ENST00000540784 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
DDB1-218ENST00000540784 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
DDB1-218ENST00000540784 KRTAP4-2Q9BYR5 136 aa3.6□□□□□ -1.83
DDB1-218ENST00000540784 LCE1CQ5T751 118 aa3.59□□□□□ -1.83
DDB1-218ENST00000540784 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
DDB1-218ENST00000540784 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
DDB1-218ENST00000540784 KRTAP21-2Q3LI59 83 aa3.06□□□□□ -1.92
DDB1-218ENST00000540784 PRM1P04553 51 aa2.91□□□□□ -1.94
DDB1-218ENST00000540784 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
DDB1-218ENST00000540784 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
DDB1-218ENST00000540784 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
DDB1-218ENST00000540784 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
DDB1-218ENST00000540784 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 82.9 ms