RNA–Protein interactions for RNA: ENST00000540768.5

NUP85-203, Transcript of nucleoporin 85, humanhuman

TSL 2 BASIC

Gene NUP85, Length 1,926 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-203ENST00000540768 MDN1Q9NU22 5596 aa3.66□□□□□ -1.82
NUP85-203ENST00000540768 KRTAP4-8A0A0G2JLE6 195 aa3.65□□□□□ -1.83
NUP85-203ENST00000540768 KRTAP4-8Q9BYQ9 185 aa3.65□□□□□ -1.83
NUP85-203ENST00000540768 KMT2DO14686 5537 aa3.65□□□□□ -1.83
NUP85-203ENST00000540768 KRTAP20-1Q3LI63 56 aa3.64□□□□□ -1.83
NUP85-203ENST00000540768 KRTAP5-9P26371 169 aa3.62□□□□□ -1.83
NUP85-203ENST00000540768 LCE3CQ5T5A8 94 aa3.61□□□□□ -1.83
NUP85-203ENST00000540768 KRTAP19-7Q3SYF9 63 aa3.58□□□□□ -1.84
NUP85-203ENST00000540768 KRTAP2-3P0C7H8 128 aa3.5□□□□□ -1.85
NUP85-203ENST00000540768 KRTAP2-4Q9BYR9 128 aa3.5□□□□□ -1.85
NUP85-203ENST00000540768 SPRR2FQ96RM1 72 aa3.5□□□□□ -1.85
NUP85-203ENST00000540768 MT1EP04732 61 aa3.48□□□□□ -1.85
NUP85-203ENST00000540768 KRTAP9-6A8MVA2 160 aa3.48□□□□□ -1.85
NUP85-203ENST00000540768 INE1O15225 51 aa3.47□□□□□ -1.85
NUP85-203ENST00000540768 SPRR2EP22531 72 aa3.47□□□□□ -1.85
NUP85-203ENST00000540768 SPRR2BP35325 72 aa3.47□□□□□ -1.85
NUP85-203ENST00000540768 SPRR2AP35326 72 aa3.47□□□□□ -1.85
NUP85-203ENST00000540768 KRTAP19-4Q3LI73 84 aa3.47□□□□□ -1.85
NUP85-203ENST00000540768 MT1LQ93083 61 aa3.47□□□□□ -1.85
NUP85-203ENST00000540768 KRTAP4-7Q9BYR0 210 aa3.45□□□□□ -1.86
NUP85-203ENST00000540768 LCE1AQ5T7P2 110 aa3.4□□□□□ -1.86
NUP85-203ENST00000540768 KRTAP2-2Q9BYT5 123 aa3.39□□□□□ -1.87
NUP85-203ENST00000540768 KRTAP2-1Q9BYU5 128 aa3.39□□□□□ -1.87
NUP85-203ENST00000540768 SPRR2DP22532 72 aa3.36□□□□□ -1.87
NUP85-203ENST00000540768 LCE3BQ5TA77 95 aa3.34□□□□□ -1.88
NUP85-203ENST00000540768 KRTAP19-3Q7Z4W3 81 aa3.27□□□□□ -1.89
NUP85-203ENST00000540768 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
NUP85-203ENST00000540768 KRTAP4-3Q9BYR4 195 aa3.27□□□□□ -1.89
NUP85-203ENST00000540768 DSTQ03001 7570 aaKnown RBP3.26□□□□□ -1.89
NUP85-203ENST00000540768 MT1GP13640 62 aa3.25□□□□□ -1.89
NUP85-203ENST00000540768 MT1MQ8N339 61 aa3.25□□□□□ -1.89
NUP85-203ENST00000540768 KRTAP9-9Q9BYP9 154 aa3.22□□□□□ -1.89
NUP85-203ENST00000540768 KRTAP9-4Q9BYQ2 154 aa3.22□□□□□ -1.89
NUP85-203ENST00000540768 LCE5AQ5TCM9 118 aa3.18□□□□□ -1.9
NUP85-203ENST00000540768 GPR98Q8WXG9 6306 aa3.15□□□□□ -1.91
NUP85-203ENST00000540768 KRTAP4-9Q9BYQ8 210 aa3.11□□□□□ -1.91
NUP85-203ENST00000540768 LCE1DQ5T752 114 aa3.09□□□□□ -1.92
NUP85-203ENST00000540768 HMCN1Q96RW7 5635 aa2.98□□□□□ -1.93
NUP85-203ENST00000540768 MT4P47944 62 aa2.97□□□□□ -1.93
NUP85-203ENST00000540768 LCE4AQ5TA78 99 aa2.95□□□□□ -1.94
NUP85-203ENST00000540768 KRTAP6-1Q3LI64 71 aa2.93□□□□□ -1.94
NUP85-203ENST00000540768 KRTAP4-2Q9BYR5 136 aa2.93□□□□□ -1.94
NUP85-203ENST00000540768 MT1AP04731 61 aa2.92□□□□□ -1.94
NUP85-203ENST00000540768 KRTAP5-5Q701N2 237 aaPredicted RBP2.91□□□□□ -1.94
NUP85-203ENST00000540768 KRTAP12-4P60329 112 aa2.89□□□□□ -1.95
NUP85-203ENST00000540768 KRTAP4-11Q9BYQ6 195 aa2.87□□□□□ -1.95
NUP85-203ENST00000540768 AHNAK2Q8IVF2 5795 aa2.86□□□□□ -1.95
NUP85-203ENST00000540768 KRTAP5-4Q6L8H1 288 aa2.85□□□□□ -1.95
NUP85-203ENST00000540768 KRTAP5-10Q6L8G5 202 aa2.85□□□□□ -1.95
NUP85-203ENST00000540768 SYNE1Q8NF91 8797 aaKnown RBP2.79□□□□□ -1.96
NUP85-203ENST00000540768 KRTAP5-3Q6L8H2 238 aa2.76□□□□□ -1.97
NUP85-203ENST00000540768 LCE3DQ9BYE3 92 aa2.75□□□□□ -1.97
NUP85-203ENST00000540768 KRTAP5-7Q6L8G8 165 aa2.74□□□□□ -1.97
NUP85-203ENST00000540768 KRTAP20-2Q3LI61 65 aa2.72□□□□□ -1.97
NUP85-203ENST00000540768 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
NUP85-203ENST00000540768 KRTAP6-2Q3LI66 62 aa2.64□□□□□ -1.99
NUP85-203ENST00000540768 MT3P25713 68 aa2.62□□□□□ -1.99
NUP85-203ENST00000540768 PRM1P04553 51 aa2.54□□□□□ -2
NUP85-203ENST00000540768 OBSCNQ5VST9 7968 aa2.53□□□□□ -2
NUP85-203ENST00000540768 KRTAP5-2Q701N4 177 aa2.47□□□□□ -2.01
NUP85-203ENST00000540768 MUC5ACP98088 5654 aa2.44□□□□□ -2.02
NUP85-203ENST00000540768 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
NUP85-203ENST00000540768 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
NUP85-203ENST00000540768 AHNAKQ09666 5890 aaKnown RBP2.39□□□□□ -2.03
NUP85-203ENST00000540768 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
NUP85-203ENST00000540768 LCE1EQ5T753 118 aa2.19□□□□□ -2.06
NUP85-203ENST00000540768 LCE1FQ5T754 118 aa2.15□□□□□ -2.06
NUP85-203ENST00000540768 LCE1BQ5T7P3 118 aa2.09□□□□□ -2.08
NUP85-203ENST00000540768 LCE1CQ5T751 118 aa2.05□□□□□ -2.08
NUP85-203ENST00000540768 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.95□□□□□ -2.1
NUP85-203ENST00000540768 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
NUP85-203ENST00000540768 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
NUP85-203ENST00000540768 KRTAP4-4Q9BYR3 166 aa1.7□□□□□ -2.14
NUP85-203ENST00000540768 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
NUP85-203ENST00000540768 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
NUP85-203ENST00000540768 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
NUP85-203ENST00000540768 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 55.3 ms