RNA–Protein interactions for RNA: ENST00000540418.5

MDM1-210, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best)

Gene MDM1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-210ENST00000540418 KRTAP2-4Q9BYR9 128 aa5.41□□□□□ -1.54
MDM1-210ENST00000540418 LCE5AQ5TCM9 118 aa5.39□□□□□ -1.55
MDM1-210ENST00000540418 KRTAP23-1A1A580 65 aa5.36□□□□□ -1.55
MDM1-210ENST00000540418 KRTAP12-3P60328 96 aa5.36□□□□□ -1.55
MDM1-210ENST00000540418 MT1GP13640 62 aa5.33□□□□□ -1.56
MDM1-210ENST00000540418 MT1LQ93083 61 aa5.33□□□□□ -1.56
MDM1-210ENST00000540418 BRK1Q8WUW1 75 aa5.32□□□□□ -1.56
MDM1-210ENST00000540418 PP632Q6XCG6 107 aa5.28□□□□□ -1.56
MDM1-210ENST00000540418 LCE3BQ5TA77 95 aa5.27□□□□□ -1.57
MDM1-210ENST00000540418 LOC100996750A0A140TA64 210 aa5.26□□□□□ -1.57
MDM1-210ENST00000540418 KRTAP4-6Q9BYQ5 205 aa5.26□□□□□ -1.57
MDM1-210ENST00000540418 KRTAP2-2Q9BYT5 123 aa5.26□□□□□ -1.57
MDM1-210ENST00000540418 KRTAP2-1Q9BYU5 128 aa5.26□□□□□ -1.57
MDM1-210ENST00000540418 MT1MQ8N339 61 aa5.23□□□□□ -1.57
MDM1-210ENST00000540418 DSTQ03001 7570 aaKnown RBP5.12□□□□□ -1.59
MDM1-210ENST00000540418 KRTAP15-1Q3LI76 137 aa5.12□□□□□ -1.59
MDM1-210ENST00000540418 KRTAP19-4Q3LI73 84 aa5.1□□□□□ -1.59
MDM1-210ENST00000540418 KRTAP4-3Q9BYR4 195 aa5.09□□□□□ -1.59
MDM1-210ENST00000540418 KRTAP4-7Q9BYR0 210 aa5.08□□□□□ -1.6
MDM1-210ENST00000540418 PMAIP1Q13794 54 aa5.03□□□□□ -1.6
MDM1-210ENST00000540418 LCE3CQ5T5A8 94 aa4.97□□□□□ -1.61
MDM1-210ENST00000540418 PRO0628Q9UI54 55 aa4.92□□□□□ -1.62
MDM1-210ENST00000540418 LCE4AQ5TA78 99 aa4.84□□□□□ -1.63
MDM1-210ENST00000540418 KRTAP4-9Q9BYQ8 210 aa4.82□□□□□ -1.64
MDM1-210ENST00000540418 KRTAP5-4Q6L8H1 288 aa4.81□□□□□ -1.64
MDM1-210ENST00000540418 KRTAP5-5Q701N2 237 aaPredicted RBP4.77□□□□□ -1.65
MDM1-210ENST00000540418 LCE1DQ5T752 114 aa4.75□□□□□ -1.65
MDM1-210ENST00000540418 PRAC1Q96KF2 57 aa4.75□□□□□ -1.65
MDM1-210ENST00000540418 MT4P47944 62 aa4.74□□□□□ -1.65
MDM1-210ENST00000540418 KRTAP9-6A8MVA2 160 aa4.67□□□□□ -1.66
MDM1-210ENST00000540418 KTN1-AS1Q86SY8 53 aa4.63□□□□□ -1.67
MDM1-210ENST00000540418 HMCN1Q96RW7 5635 aa4.59□□□□□ -1.67
MDM1-210ENST00000540418 KRTAP12-4P60329 112 aa4.58□□□□□ -1.68
MDM1-210ENST00000540418 SPRR5A0A1B0GTR4 108 aa4.54□□□□□ -1.68
MDM1-210ENST00000540418 MT1AP04731 61 aa4.54□□□□□ -1.68
MDM1-210ENST00000540418 KRTAP20-2Q3LI61 65 aa4.51□□□□□ -1.69
MDM1-210ENST00000540418 SVIPQ8NHG7 77 aa4.51□□□□□ -1.69
MDM1-210ENST00000540418 KRTAP6-1Q3LI64 71 aa4.49□□□□□ -1.69
MDM1-210ENST00000540418 SYNE1Q8NF91 8797 aaKnown RBP4.46□□□□□ -1.7
MDM1-210ENST00000540418 H3BS24 57 aa4.4□□□□□ -1.7
MDM1-210ENST00000540418 KRTAP5-3Q6L8H2 238 aa4.37□□□□□ -1.71
MDM1-210ENST00000540418 KRTAP9-4Q9BYQ2 154 aa4.37□□□□□ -1.71
MDM1-210ENST00000540418 AHNAK2Q8IVF2 5795 aa4.29□□□□□ -1.72
MDM1-210ENST00000540418 GPR98Q8WXG9 6306 aa4.28□□□□□ -1.72
MDM1-210ENST00000540418 KRTAP5-2Q701N4 177 aa4.27□□□□□ -1.73
MDM1-210ENST00000540418 KRTAP5-10Q6L8G5 202 aa4.25□□□□□ -1.73
MDM1-210ENST00000540418 KRTAP6-2Q3LI66 62 aa4.24□□□□□ -1.73
MDM1-210ENST00000540418 MT3P25713 68 aa4.15□□□□□ -1.75
MDM1-210ENST00000540418 KRTAP4-11Q9BYQ6 195 aa4.05□□□□□ -1.76
MDM1-210ENST00000540418 KRTAP5-7Q6L8G8 165 aa4.04□□□□□ -1.76
MDM1-210ENST00000540418 KRTAP9-9Q9BYP9 154 aa4.03□□□□□ -1.76
MDM1-210ENST00000540418 LUZP6Q538Z0 58 aa3.98□□□□□ -1.77
MDM1-210ENST00000540418 KRTAP4-2Q9BYR5 136 aa3.95□□□□□ -1.78
MDM1-210ENST00000540418 KRTAP4-12Q9BQ66 201 aa3.92□□□□□ -1.78
MDM1-210ENST00000540418 KRTAP5-8O75690 187 aa3.9□□□□□ -1.78
MDM1-210ENST00000540418 OBSCNQ5VST9 7968 aa3.87□□□□□ -1.79
MDM1-210ENST00000540418 KRTAP5-1Q6L8H4 278 aa3.77□□□□□ -1.81
MDM1-210ENST00000540418 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
MDM1-210ENST00000540418 A0A0A0MQY5 61 aa3.74□□□□□ -1.81
MDM1-210ENST00000540418 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.83
MDM1-210ENST00000540418 MUC5ACP98088 5654 aa3.58□□□□□ -1.84
MDM1-210ENST00000540418 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
MDM1-210ENST00000540418 LCE3EQ5T5B0 92 aa3.48□□□□□ -1.85
MDM1-210ENST00000540418 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
MDM1-210ENST00000540418 LCE1CQ5T751 118 aa3.47□□□□□ -1.85
MDM1-210ENST00000540418 MUC5BQ9HC84 5762 aaPredicted RBP3.47□□□□□ -1.85
MDM1-210ENST00000540418 AHNAKQ09666 5890 aaKnown RBP3.4□□□□□ -1.86
MDM1-210ENST00000540418 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
MDM1-210ENST00000540418 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
MDM1-210ENST00000540418 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
MDM1-210ENST00000540418 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
MDM1-210ENST00000540418 INE1O15225 51 aa2.87□□□□□ -1.95
MDM1-210ENST00000540418 PRM1P04553 51 aa2.78□□□□□ -1.96
MDM1-210ENST00000540418 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
MDM1-210ENST00000540418 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
MDM1-210ENST00000540418 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
MDM1-210ENST00000540418 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
MDM1-210ENST00000540418 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 121 ms