RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 KRTAP25-1Q3LHN0 102 aa4.99□□□□□ -1.61
CCDC130-202ENST00000540216 MT1EP04732 61 aa4.98□□□□□ -1.61
CCDC130-202ENST00000540216 C10orf95Q9H7T3 257 aa4.98□□□□□ -1.61
CCDC130-202ENST00000540216 GPR98Q8WXG9 6306 aa4.98□□□□□ -1.61
CCDC130-202ENST00000540216 KRTAP2-2Q9BYT5 123 aa4.97□□□□□ -1.61
CCDC130-202ENST00000540216 KRTAP2-1Q9BYU5 128 aa4.97□□□□□ -1.61
CCDC130-202ENST00000540216 LCE3BQ5TA77 95 aa4.93□□□□□ -1.62
CCDC130-202ENST00000540216 KRTAP19-5Q3LI72 72 aa4.92□□□□□ -1.62
CCDC130-202ENST00000540216 LCE5AQ5TCM9 118 aa4.92□□□□□ -1.62
CCDC130-202ENST00000540216 KRTAP19-3Q7Z4W3 81 aa4.92□□□□□ -1.62
CCDC130-202ENST00000540216 LCE3AQ5TA76 89 aa4.88□□□□□ -1.63
CCDC130-202ENST00000540216 ROMO1P60602 79 aa4.87□□□□□ -1.63
CCDC130-202ENST00000540216 MT1GP13640 62 aa4.83□□□□□ -1.64
CCDC130-202ENST00000540216 H3BS24 57 aa4.82□□□□□ -1.64
CCDC130-202ENST00000540216 PP632Q6XCG6 107 aa4.81□□□□□ -1.64
CCDC130-202ENST00000540216 MT1LQ93083 61 aa4.78□□□□□ -1.64
CCDC130-202ENST00000540216 MT1MQ8N339 61 aa4.73□□□□□ -1.65
CCDC130-202ENST00000540216 KRTAP12-3P60328 96 aa4.72□□□□□ -1.65
CCDC130-202ENST00000540216 DSTQ03001 7570 aaKnown RBP4.72□□□□□ -1.65
CCDC130-202ENST00000540216 KRTAP23-1A1A580 65 aa4.63□□□□□ -1.67
CCDC130-202ENST00000540216 KRTAP4-3Q9BYR4 195 aa4.56□□□□□ -1.68
CCDC130-202ENST00000540216 KRTAP19-4Q3LI73 84 aa4.53□□□□□ -1.68
CCDC130-202ENST00000540216 KRTAP15-1Q3LI76 137 aa4.52□□□□□ -1.69
CCDC130-202ENST00000540216 LCE4AQ5TA78 99 aa4.52□□□□□ -1.69
CCDC130-202ENST00000540216 KRTAP4-9Q9BYQ8 210 aa4.51□□□□□ -1.69
CCDC130-202ENST00000540216 KRTAP4-7Q9BYR0 210 aa4.51□□□□□ -1.69
CCDC130-202ENST00000540216 HMCN1Q96RW7 5635 aa4.51□□□□□ -1.69
CCDC130-202ENST00000540216 AHNAK2Q8IVF2 5795 aa4.49□□□□□ -1.69
CCDC130-202ENST00000540216 LCE1DQ5T752 114 aa4.45□□□□□ -1.7
CCDC130-202ENST00000540216 KRTAP5-4Q6L8H1 288 aa4.45□□□□□ -1.7
CCDC130-202ENST00000540216 NDUFAF8A1L188 74 aa4.4□□□□□ -1.71
CCDC130-202ENST00000540216 MT4P47944 62 aa4.4□□□□□ -1.71
CCDC130-202ENST00000540216 LCE3CQ5T5A8 94 aa4.35□□□□□ -1.71
CCDC130-202ENST00000540216 KRTAP5-5Q701N2 237 aaPredicted RBP4.33□□□□□ -1.72
CCDC130-202ENST00000540216 LUZP6Q538Z0 58 aa4.31□□□□□ -1.72
CCDC130-202ENST00000540216 KRTAP4-6Q9BYQ5 205 aa4.29□□□□□ -1.72
CCDC130-202ENST00000540216 LOC100996750A0A140TA64 210 aa4.26□□□□□ -1.73
CCDC130-202ENST00000540216 KRTAP5-10Q6L8G5 202 aa4.26□□□□□ -1.73
CCDC130-202ENST00000540216 A0A0A0MQY5 61 aa4.22□□□□□ -1.73
CCDC130-202ENST00000540216 SPRR5A0A1B0GTR4 108 aa4.21□□□□□ -1.74
CCDC130-202ENST00000540216 KRTAP12-4P60329 112 aa4.21□□□□□ -1.74
CCDC130-202ENST00000540216 KRTAP20-2Q3LI61 65 aa4.18□□□□□ -1.74
CCDC130-202ENST00000540216 KRTAP5-7Q6L8G8 165 aa4.11□□□□□ -1.75
CCDC130-202ENST00000540216 MT1AP04731 61 aa4.08□□□□□ -1.76
CCDC130-202ENST00000540216 KRTAP9-6A8MVA2 160 aa4.07□□□□□ -1.76
CCDC130-202ENST00000540216 KRTAP5-3Q6L8H2 238 aa4.05□□□□□ -1.76
CCDC130-202ENST00000540216 KRTAP6-1Q3LI64 71 aa4.02□□□□□ -1.77
CCDC130-202ENST00000540216 SYNE1Q8NF91 8797 aaKnown RBP3.98□□□□□ -1.77
CCDC130-202ENST00000540216 KRTAP5-2Q701N4 177 aa3.93□□□□□ -1.78
CCDC130-202ENST00000540216 KRTAP9-4Q9BYQ2 154 aa3.92□□□□□ -1.78
CCDC130-202ENST00000540216 INE1O15225 51 aa3.87□□□□□ -1.79
CCDC130-202ENST00000540216 AHNAKQ09666 5890 aaKnown RBP3.84□□□□□ -1.79
CCDC130-202ENST00000540216 KRTAP6-2Q3LI66 62 aa3.82□□□□□ -1.8
CCDC130-202ENST00000540216 KRTAP4-11Q9BYQ6 195 aa3.79□□□□□ -1.8
CCDC130-202ENST00000540216 MUC5BQ9HC84 5762 aaPredicted RBP3.76□□□□□ -1.81
CCDC130-202ENST00000540216 MUC5ACP98088 5654 aa3.74□□□□□ -1.81
CCDC130-202ENST00000540216 MT3P25713 68 aa3.73□□□□□ -1.81
CCDC130-202ENST00000540216 KRTAP5-8O75690 187 aa3.65□□□□□ -1.83
CCDC130-202ENST00000540216 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
CCDC130-202ENST00000540216 KRTAP5-1Q6L8H4 278 aa3.48□□□□□ -1.85
CCDC130-202ENST00000540216 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.86
CCDC130-202ENST00000540216 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
CCDC130-202ENST00000540216 KRTAP4-2Q9BYR5 136 aa3.18□□□□□ -1.9
CCDC130-202ENST00000540216 LCE1CQ5T751 118 aa3.17□□□□□ -1.9
CCDC130-202ENST00000540216 LCE1BQ5T7P3 118 aa3.17□□□□□ -1.9
CCDC130-202ENST00000540216 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
CCDC130-202ENST00000540216 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
CCDC130-202ENST00000540216 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
CCDC130-202ENST00000540216 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
CCDC130-202ENST00000540216 KRTAP4-12Q9BQ66 201 aa2.79□□□□□ -1.96
CCDC130-202ENST00000540216 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
CCDC130-202ENST00000540216 KRTAP21-2Q3LI59 83 aa2.65□□□□□ -1.99
CCDC130-202ENST00000540216 PRM1P04553 51 aa2.5□□□□□ -2.01
CCDC130-202ENST00000540216 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
CCDC130-202ENST00000540216 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
CCDC130-202ENST00000540216 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
CCDC130-202ENST00000540216 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
CCDC130-202ENST00000540216 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 9.6 ms