RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 SPRR2DP22532 72 aa3.24□□□□□ -1.89
DDB1-217ENST00000540166 MT1XP80297 61 aa3.22□□□□□ -1.89
DDB1-217ENST00000540166 KRTAP10-7P60409 375 aaPredicted RBP3.2□□□□□ -1.9
DDB1-217ENST00000540166 LCE3CQ5T5A8 94 aa3.19□□□□□ -1.9
DDB1-217ENST00000540166 KRTAP2-3P0C7H8 128 aa3.17□□□□□ -1.9
DDB1-217ENST00000540166 KRTAP2-4Q9BYR9 128 aa3.17□□□□□ -1.9
DDB1-217ENST00000540166 KRTAP19-5Q3LI72 72 aa3.13□□□□□ -1.91
DDB1-217ENST00000540166 KRTAP4-8A0A0G2JLE6 195 aa3.12□□□□□ -1.91
DDB1-217ENST00000540166 KRTAP4-8Q9BYQ9 185 aa3.12□□□□□ -1.91
DDB1-217ENST00000540166 KMT2DO14686 5537 aa3.11□□□□□ -1.91
DDB1-217ENST00000540166 NEBP20929 6669 aa3.08□□□□□ -1.92
DDB1-217ENST00000540166 KRTAP2-2Q9BYT5 123 aa3.07□□□□□ -1.92
DDB1-217ENST00000540166 KRTAP2-1Q9BYU5 128 aa3.07□□□□□ -1.92
DDB1-217ENST00000540166 LCE3BQ5TA77 95 aa3.06□□□□□ -1.92
DDB1-217ENST00000540166 KRTAP5-9P26371 169 aa3.04□□□□□ -1.92
DDB1-217ENST00000540166 LCE1AQ5T7P2 110 aa3□□□□□ -1.93
DDB1-217ENST00000540166 KRTAP4-7Q9BYR0 210 aa2.95□□□□□ -1.94
DDB1-217ENST00000540166 KRTAP12-4P60329 112 aa2.95□□□□□ -1.94
DDB1-217ENST00000540166 MDN1Q9NU22 5596 aa2.94□□□□□ -1.94
DDB1-217ENST00000540166 MUC12Q9UKN1 5478 aa2.93□□□□□ -1.94
DDB1-217ENST00000540166 KRTAP19-3Q7Z4W3 81 aa2.92□□□□□ -1.94
DDB1-217ENST00000540166 KRTAP9-6A8MVA2 160 aa2.92□□□□□ -1.94
DDB1-217ENST00000540166 MT1GP13640 62 aa2.92□□□□□ -1.94
DDB1-217ENST00000540166 KRTAP19-4Q3LI73 84 aa2.87□□□□□ -1.95
DDB1-217ENST00000540166 MT1EP04732 61 aa2.86□□□□□ -1.95
DDB1-217ENST00000540166 MT4P47944 62 aa2.85□□□□□ -1.95
DDB1-217ENST00000540166 DSTQ03001 7570 aaKnown RBP2.85□□□□□ -1.95
DDB1-217ENST00000540166 KRTAP19-7Q3SYF9 63 aa2.84□□□□□ -1.95
DDB1-217ENST00000540166 KRTAP4-9Q9BYQ8 210 aa2.83□□□□□ -1.96
DDB1-217ENST00000540166 MT1LQ93083 61 aa2.82□□□□□ -1.96
DDB1-217ENST00000540166 GPR98Q8WXG9 6306 aa2.76□□□□□ -1.97
DDB1-217ENST00000540166 LCE5AQ5TCM9 118 aa2.76□□□□□ -1.97
DDB1-217ENST00000540166 MT1MQ8N339 61 aa2.76□□□□□ -1.97
DDB1-217ENST00000540166 LOC100996750A0A140TA64 210 aa2.74□□□□□ -1.97
DDB1-217ENST00000540166 LCE4AQ5TA78 99 aa2.74□□□□□ -1.97
DDB1-217ENST00000540166 KRTAP4-3Q9BYR4 195 aa2.72□□□□□ -1.97
DDB1-217ENST00000540166 SYNE1Q8NF91 8797 aaKnown RBP2.71□□□□□ -1.98
DDB1-217ENST00000540166 LCE1DQ5T752 114 aa2.66□□□□□ -1.98
DDB1-217ENST00000540166 PRM1P04553 51 aa2.63□□□□□ -1.99
DDB1-217ENST00000540166 LCE3DQ9BYE3 92 aa2.62□□□□□ -1.99
DDB1-217ENST00000540166 LCE3EQ5T5B0 92 aa2.61□□□□□ -1.99
DDB1-217ENST00000540166 OBSCNQ5VST9 7968 aa2.58□□□□□ -2
DDB1-217ENST00000540166 KRTAP4-6Q9BYQ5 205 aa2.52□□□□□ -2.01
DDB1-217ENST00000540166 MT1AP04731 61 aa2.46□□□□□ -2.02
DDB1-217ENST00000540166 KRTAP9-4Q9BYQ2 154 aa2.45□□□□□ -2.02
DDB1-217ENST00000540166 KRTAP20-2Q3LI61 65 aa2.42□□□□□ -2.02
DDB1-217ENST00000540166 KRTAP6-1Q3LI64 71 aa2.41□□□□□ -2.02
DDB1-217ENST00000540166 HMCN1Q96RW7 5635 aa2.4□□□□□ -2.03
DDB1-217ENST00000540166 LCE1FQ5T754 118 aa2.4□□□□□ -2.03
DDB1-217ENST00000540166 KRTAP5-3Q6L8H2 238 aa2.39□□□□□ -2.03
DDB1-217ENST00000540166 KRTAP5-4Q6L8H1 288 aa2.39□□□□□ -2.03
DDB1-217ENST00000540166 KRTAP6-2Q3LI66 62 aa2.38□□□□□ -2.03
DDB1-217ENST00000540166 MT3P25713 68 aa2.36□□□□□ -2.03
DDB1-217ENST00000540166 KRTAP5-5Q701N2 237 aaPredicted RBP2.33□□□□□ -2.04
DDB1-217ENST00000540166 KRTAP9-9Q9BYP9 154 aa2.32□□□□□ -2.04
DDB1-217ENST00000540166 AHNAK2Q8IVF2 5795 aa2.31□□□□□ -2.04
DDB1-217ENST00000540166 LCE1EQ5T753 118 aa2.27□□□□□ -2.05
DDB1-217ENST00000540166 KRTAP5-10Q6L8G5 202 aa2.27□□□□□ -2.05
DDB1-217ENST00000540166 KRTAP4-11Q9BYQ6 195 aa2.27□□□□□ -2.05
DDB1-217ENST00000540166 KRTAP5-7Q6L8G8 165 aa2.22□□□□□ -2.05
DDB1-217ENST00000540166 LCE1BQ5T7P3 118 aa2.18□□□□□ -2.06
DDB1-217ENST00000540166 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
DDB1-217ENST00000540166 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
DDB1-217ENST00000540166 AHNAKQ09666 5890 aaKnown RBP2.05□□□□□ -2.08
DDB1-217ENST00000540166 KRTAP5-2Q701N4 177 aa2.04□□□□□ -2.08
DDB1-217ENST00000540166 MUC5ACP98088 5654 aa2□□□□□ -2.09
DDB1-217ENST00000540166 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
DDB1-217ENST00000540166 KRTAP5-1Q6L8H4 278 aa1.85□□□□□ -2.11
DDB1-217ENST00000540166 KRTAP4-12Q9BQ66 201 aa1.83□□□□□ -2.12
DDB1-217ENST00000540166 KRTAP4-2Q9BYR5 136 aa1.83□□□□□ -2.12
DDB1-217ENST00000540166 LCE1CQ5T751 118 aa1.83□□□□□ -2.12
DDB1-217ENST00000540166 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
DDB1-217ENST00000540166 KRTAP5-11Q6L8G4 156 aa1.57□□□□□ -2.16
DDB1-217ENST00000540166 KRTAP4-4Q9BYR3 166 aa1.57□□□□□ -2.16
DDB1-217ENST00000540166 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
DDB1-217ENST00000540166 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.47□□□□□ -2.17
DDB1-217ENST00000540166 KRTAP21-2Q3LI59 83 aa1.46□□□□□ -2.18
DDB1-217ENST00000540166 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 76.8 ms