RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 KRTAP25-1Q3LHN0 102 aa8.04□□□□□ -1.12
TRIM65-202ENST00000540128 LCE5AQ5TCM9 118 aa8.04□□□□□ -1.12
TRIM65-202ENST00000540128 CDC42SE1Q9NRR8 79 aa7.95□□□□□ -1.14
TRIM65-202ENST00000540128 MT1GP13640 62 aa7.92□□□□□ -1.14
TRIM65-202ENST00000540128 LCE3BQ5TA77 95 aa7.91□□□□□ -1.14
TRIM65-202ENST00000540128 MT1LQ93083 61 aa7.89□□□□□ -1.15
TRIM65-202ENST00000540128 KRTAP12-3P60328 96 aa7.84□□□□□ -1.15
TRIM65-202ENST00000540128 KRTAP23-1A1A580 65 aa7.82□□□□□ -1.16
TRIM65-202ENST00000540128 PP632Q6XCG6 107 aa7.82□□□□□ -1.16
TRIM65-202ENST00000540128 ROMO1P60602 79 aa7.76□□□□□ -1.17
TRIM65-202ENST00000540128 MT1MQ8N339 61 aa7.76□□□□□ -1.17
TRIM65-202ENST00000540128 DSTQ03001 7570 aaKnown RBP7.6□□□□□ -1.19
TRIM65-202ENST00000540128 KRTAP4-3Q9BYR4 195 aa7.54□□□□□ -1.2
TRIM65-202ENST00000540128 GPR98Q8WXG9 6306 aa7.53□□□□□ -1.2
TRIM65-202ENST00000540128 KRTAP19-4Q3LI73 84 aa7.52□□□□□ -1.21
TRIM65-202ENST00000540128 KRTAP4-7Q9BYR0 210 aa7.5□□□□□ -1.21
TRIM65-202ENST00000540128 KRTAP15-1Q3LI76 137 aa7.47□□□□□ -1.21
TRIM65-202ENST00000540128 BRK1Q8WUW1 75 aa7.41□□□□□ -1.22
TRIM65-202ENST00000540128 LCE4AQ5TA78 99 aa7.28□□□□□ -1.24
TRIM65-202ENST00000540128 LCE3CQ5T5A8 94 aa7.27□□□□□ -1.25
TRIM65-202ENST00000540128 KRTAP4-9Q9BYQ8 210 aa7.25□□□□□ -1.25
TRIM65-202ENST00000540128 KRTAP5-4Q6L8H1 288 aa7.24□□□□□ -1.25
TRIM65-202ENST00000540128 LCE1DQ5T752 114 aa7.14□□□□□ -1.27
TRIM65-202ENST00000540128 KRTAP5-5Q701N2 237 aaPredicted RBP7.12□□□□□ -1.27
TRIM65-202ENST00000540128 LOC100996750A0A140TA64 210 aa7.07□□□□□ -1.28
TRIM65-202ENST00000540128 MT4P47944 62 aa7.07□□□□□ -1.28
TRIM65-202ENST00000540128 HMCN1Q96RW7 5635 aa7.04□□□□□ -1.28
TRIM65-202ENST00000540128 PMAIP1Q13794 54 aa7.02□□□□□ -1.29
TRIM65-202ENST00000540128 KRTAP4-6Q9BYQ5 205 aa6.96□□□□□ -1.3
TRIM65-202ENST00000540128 AHNAK2Q8IVF2 5795 aa6.92□□□□□ -1.3
TRIM65-202ENST00000540128 KRTAP5-10Q6L8G5 202 aa6.86□□□□□ -1.31
TRIM65-202ENST00000540128 KRTAP9-6A8MVA2 160 aa6.85□□□□□ -1.31
TRIM65-202ENST00000540128 SPRR5A0A1B0GTR4 108 aa6.82□□□□□ -1.32
TRIM65-202ENST00000540128 KRTAP12-4P60329 112 aa6.82□□□□□ -1.32
TRIM65-202ENST00000540128 PRO0628Q9UI54 55 aa6.81□□□□□ -1.32
TRIM65-202ENST00000540128 KRTAP20-2Q3LI61 65 aa6.77□□□□□ -1.33
TRIM65-202ENST00000540128 MT1AP04731 61 aa6.73□□□□□ -1.33
TRIM65-202ENST00000540128 SYNE1Q8NF91 8797 aaKnown RBP6.7□□□□□ -1.34
TRIM65-202ENST00000540128 PRAC1Q96KF2 57 aa6.67□□□□□ -1.34
TRIM65-202ENST00000540128 KRTAP5-7Q6L8G8 165 aa6.66□□□□□ -1.34
TRIM65-202ENST00000540128 KRTAP6-1Q3LI64 71 aa6.65□□□□□ -1.34
TRIM65-202ENST00000540128 KRTAP5-3Q6L8H2 238 aa6.59□□□□□ -1.35
TRIM65-202ENST00000540128 KRTAP9-4Q9BYQ2 154 aa6.48□□□□□ -1.37
TRIM65-202ENST00000540128 KTN1-AS1Q86SY8 53 aa6.42□□□□□ -1.38
TRIM65-202ENST00000540128 KRTAP5-2Q701N4 177 aa6.41□□□□□ -1.38
TRIM65-202ENST00000540128 KRTAP6-2Q3LI66 62 aa6.27□□□□□ -1.41
TRIM65-202ENST00000540128 MT3P25713 68 aa6.14□□□□□ -1.43
TRIM65-202ENST00000540128 KRTAP4-11Q9BYQ6 195 aa6.1□□□□□ -1.43
TRIM65-202ENST00000540128 SVIPQ8NHG7 77 aa6.03□□□□□ -1.44
TRIM65-202ENST00000540128 KRTAP5-8O75690 187 aa5.89□□□□□ -1.47
TRIM65-202ENST00000540128 AHNAKQ09666 5890 aaKnown RBP5.81□□□□□ -1.48
TRIM65-202ENST00000540128 MUC5ACP98088 5654 aa5.79□□□□□ -1.48
TRIM65-202ENST00000540128 MUC5BQ9HC84 5762 aaPredicted RBP5.78□□□□□ -1.48
TRIM65-202ENST00000540128 OBSCNQ5VST9 7968 aa5.72□□□□□ -1.49
TRIM65-202ENST00000540128 KRTAP5-1Q6L8H4 278 aa5.67□□□□□ -1.5
TRIM65-202ENST00000540128 LCE1EQ5T753 118 aa5.59□□□□□ -1.51
TRIM65-202ENST00000540128 LUZP6Q538Z0 58 aa5.58□□□□□ -1.52
TRIM65-202ENST00000540128 KRTAP9-9Q9BYP9 154 aa5.54□□□□□ -1.52
TRIM65-202ENST00000540128 LCE3DQ9BYE3 92 aa5.3□□□□□ -1.56
TRIM65-202ENST00000540128 KRTAP4-2Q9BYR5 136 aa5.22□□□□□ -1.57
TRIM65-202ENST00000540128 LCE1CQ5T751 118 aa5.17□□□□□ -1.58
TRIM65-202ENST00000540128 LCE1BQ5T7P3 118 aa5.17□□□□□ -1.58
TRIM65-202ENST00000540128 LCE3EQ5T5B0 92 aa5.06□□□□□ -1.6
TRIM65-202ENST00000540128 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.78□□□□□ -1.64
TRIM65-202ENST00000540128 NDUFAF8A1L188 74 aa4.77□□□□□ -1.65
TRIM65-202ENST00000540128 KRTAP5-11Q6L8G4 156 aa4.64□□□□□ -1.67
TRIM65-202ENST00000540128 KRTAP4-12Q9BQ66 201 aa4.54□□□□□ -1.68
TRIM65-202ENST00000540128 LCE1FQ5T754 118 aa4.45□□□□□ -1.7
TRIM65-202ENST00000540128 KRTAP21-2Q3LI59 83 aa4.4□□□□□ -1.71
TRIM65-202ENST00000540128 PHGR1C9JFL3 82 aa4□□□□□ -1.77
TRIM65-202ENST00000540128 PRM1P04553 51 aa3.96□□□□□ -1.78
TRIM65-202ENST00000540128 INE1O15225 51 aa3.94□□□□□ -1.78
TRIM65-202ENST00000540128 A0A0A0MQY5 61 aa3.93□□□□□ -1.78
TRIM65-202ENST00000540128 KRTAP4-4Q9BYR3 166 aa3.91□□□□□ -1.78
TRIM65-202ENST00000540128 MUC19Q7Z5P9 8384 aa3.53□□□□□ -1.85
TRIM65-202ENST00000540128 KRTAP21-1Q3LI58 79 aa3.04□□□□□ -1.92
TRIM65-202ENST00000540128 H3BS24 57 aa2.98□□□□□ -1.93
TRIM65-202ENST00000540128 MUC16Q8WXI7 14507 aa2.59□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms