RNA–Protein interactions for RNA: ENST00000539953.1

SCNN1A-214, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 2

Gene SCNN1A, Length 401 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-214ENST00000539953 TMEM258P61165 79 aa4.27□□□□□ -1.73
SCNN1A-214ENST00000539953 LCE3AQ5TA76 89 aa4.27□□□□□ -1.73
SCNN1A-214ENST00000539953 C10orf95Q9H7T3 257 aa4.27□□□□□ -1.73
SCNN1A-214ENST00000539953 ATP5EP56381 51 aaPredicted RBP4.25□□□□□ -1.73
SCNN1A-214ENST00000539953 KRTAP5-7Q6L8G8 165 aa4.21□□□□□ -1.74
SCNN1A-214ENST00000539953 KRTAP4-7Q9BYR0 210 aa4.2□□□□□ -1.74
SCNN1A-214ENST00000539953 KRTAP5-3Q6L8H2 238 aa4.19□□□□□ -1.74
SCNN1A-214ENST00000539953 A8MU10 97 aa4.17□□□□□ -1.74
SCNN1A-214ENST00000539953 TNP1P09430 55 aa4.15□□□□□ -1.75
SCNN1A-214ENST00000539953 SMIM26A0A096LP01 95 aa4.14□□□□□ -1.75
SCNN1A-214ENST00000539953 KRTAP20-2Q3LI61 65 aa4.14□□□□□ -1.75
SCNN1A-214ENST00000539953 KRTAP5-5Q701N2 237 aaPredicted RBP4.12□□□□□ -1.75
SCNN1A-214ENST00000539953 A0A1B0GU69 56 aa4.11□□□□□ -1.75
SCNN1A-214ENST00000539953 RPS28P62857 69 aaKnown RBP4.1□□□□□ -1.75
SCNN1A-214ENST00000539953 KRTAP12-3P60328 96 aa4.09□□□□□ -1.75
SCNN1A-214ENST00000539953 SPRR5A0A1B0GTR4 108 aa4.08□□□□□ -1.76
SCNN1A-214ENST00000539953 PRR15LQ9BU68 103 aa4.03□□□□□ -1.76
SCNN1A-214ENST00000539953 KRTAP12-4P60329 112 aa4□□□□□ -1.77
SCNN1A-214ENST00000539953 LINC01558Q9Y6Z2 57 aa4□□□□□ -1.77
SCNN1A-214ENST00000539953 LOC100996750A0A140TA64 210 aa3.99□□□□□ -1.77
SCNN1A-214ENST00000539953 Q1T7F1 81 aa3.98□□□□□ -1.77
SCNN1A-214ENST00000539953 V9GYY9 64 aa3.95□□□□□ -1.78
SCNN1A-214ENST00000539953 SYNE1Q8NF91 8797 aaKnown RBP3.95□□□□□ -1.78
SCNN1A-214ENST00000539953 UQCR11O14957 56 aa3.86□□□□□ -1.79
SCNN1A-214ENST00000539953 PSPHP1O15172 72 aa3.85□□□□□ -1.79
SCNN1A-214ENST00000539953 KRTAP4-11Q9BYQ6 195 aa3.83□□□□□ -1.8
SCNN1A-214ENST00000539953 KRTAP25-1Q3LHN0 102 aa3.81□□□□□ -1.8
SCNN1A-214ENST00000539953 KRTAP19-4Q3LI73 84 aa3.81□□□□□ -1.8
SCNN1A-214ENST00000539953 KRTAP5-2Q701N4 177 aa3.81□□□□□ -1.8
SCNN1A-214ENST00000539953 K7ERS5 55 aa3.77□□□□□ -1.81
SCNN1A-214ENST00000539953 MIR22HGQ0VDD5 57 aa3.75□□□□□ -1.81
SCNN1A-214ENST00000539953 LCE3CQ5T5A8 94 aa3.75□□□□□ -1.81
SCNN1A-214ENST00000539953 KRTAP6-1Q3LI64 71 aa3.74□□□□□ -1.81
SCNN1A-214ENST00000539953 A6NED7 52 aa3.73□□□□□ -1.81
SCNN1A-214ENST00000539953 KRTAP5-8O75690 187 aa3.73□□□□□ -1.81
SCNN1A-214ENST00000539953 MT1AP04731 61 aa3.73□□□□□ -1.81
SCNN1A-214ENST00000539953 KRTAP15-1Q3LI76 137 aa3.73□□□□□ -1.81
SCNN1A-214ENST00000539953 CDC42SE1Q9NRR8 79 aa3.7□□□□□ -1.82
SCNN1A-214ENST00000539953 MUC5ACP98088 5654 aa3.68□□□□□ -1.82
SCNN1A-214ENST00000539953 AHNAKQ09666 5890 aaKnown RBP3.68□□□□□ -1.82
SCNN1A-214ENST00000539953 KRTAP23-1A1A580 65 aa3.67□□□□□ -1.82
SCNN1A-214ENST00000539953 MUC5BQ9HC84 5762 aaPredicted RBP3.66□□□□□ -1.82
SCNN1A-214ENST00000539953 KRTAP9-4Q9BYQ2 154 aa3.64□□□□□ -1.83
SCNN1A-214ENST00000539953 KRTAP6-2Q3LI66 62 aa3.61□□□□□ -1.83
SCNN1A-214ENST00000539953 KRTAP9-6A8MVA2 160 aa3.6□□□□□ -1.83
SCNN1A-214ENST00000539953 BRK1Q8WUW1 75 aa3.59□□□□□ -1.83
SCNN1A-214ENST00000539953 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
SCNN1A-214ENST00000539953 KRTAP9-9Q9BYP9 154 aa3.52□□□□□ -1.85
SCNN1A-214ENST00000539953 KRTAP4-12Q9BQ66 201 aa3.51□□□□□ -1.85
SCNN1A-214ENST00000539953 PRO0628Q9UI54 55 aa3.49□□□□□ -1.85
SCNN1A-214ENST00000539953 KRTAP5-1Q6L8H4 278 aa3.46□□□□□ -1.86
SCNN1A-214ENST00000539953 ROMO1P60602 79 aa3.44□□□□□ -1.86
SCNN1A-214ENST00000539953 MT3P25713 68 aa3.4□□□□□ -1.87
SCNN1A-214ENST00000539953 PMAIP1Q13794 54 aa3.4□□□□□ -1.87
SCNN1A-214ENST00000539953 KTN1-AS1Q86SY8 53 aa3.25□□□□□ -1.89
SCNN1A-214ENST00000539953 H3BS24 57 aa3.2□□□□□ -1.9
SCNN1A-214ENST00000539953 LCE1EQ5T753 118 aa3.2□□□□□ -1.9
SCNN1A-214ENST00000539953 PRAC1Q96KF2 57 aa3.2□□□□□ -1.9
SCNN1A-214ENST00000539953 KRTAP4-2Q9BYR5 136 aa3.08□□□□□ -1.92
SCNN1A-214ENST00000539953 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
SCNN1A-214ENST00000539953 SVIPQ8NHG7 77 aa2.98□□□□□ -1.93
SCNN1A-214ENST00000539953 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
SCNN1A-214ENST00000539953 KRTAP5-11Q6L8G4 156 aa2.72□□□□□ -1.97
SCNN1A-214ENST00000539953 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
SCNN1A-214ENST00000539953 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
SCNN1A-214ENST00000539953 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
SCNN1A-214ENST00000539953 LUZP6Q538Z0 58 aa2.59□□□□□ -1.99
SCNN1A-214ENST00000539953 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
SCNN1A-214ENST00000539953 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
SCNN1A-214ENST00000539953 NDUFAF8A1L188 74 aa2.46□□□□□ -2.02
SCNN1A-214ENST00000539953 LCE3EQ5T5B0 92 aa2.43□□□□□ -2.02
SCNN1A-214ENST00000539953 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
SCNN1A-214ENST00000539953 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
SCNN1A-214ENST00000539953 A0A0A0MQY5 61 aa2.11□□□□□ -2.07
SCNN1A-214ENST00000539953 INE1O15225 51 aa2.06□□□□□ -2.08
SCNN1A-214ENST00000539953 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
SCNN1A-214ENST00000539953 PRM1P04553 51 aa1.77□□□□□ -2.13
SCNN1A-214ENST00000539953 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 32.6 ms