RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 MT1LQ93083 61 aa7.96□□□□□ -1.14
HOMER3-204ENST00000539827 A0A0A0MQY5 61 aa7.93□□□□□ -1.14
HOMER3-204ENST00000539827 KRTAP4-7Q9BYR0 210 aa7.84□□□□□ -1.15
HOMER3-204ENST00000539827 SPRR2FQ96RM1 72 aa7.8□□□□□ -1.16
HOMER3-204ENST00000539827 KRTAP19-4Q3LI73 84 aa7.76□□□□□ -1.17
HOMER3-204ENST00000539827 MUC12Q9UKN1 5478 aa7.75□□□□□ -1.17
HOMER3-204ENST00000539827 KRTAP6-3Q3LI67 103 aa7.75□□□□□ -1.17
HOMER3-204ENST00000539827 KRTAP19-3Q7Z4W3 81 aa7.71□□□□□ -1.18
HOMER3-204ENST00000539827 MDN1Q9NU22 5596 aa7.66□□□□□ -1.18
HOMER3-204ENST00000539827 MT1GP13640 62 aa7.63□□□□□ -1.19
HOMER3-204ENST00000539827 KRTAP9-6A8MVA2 160 aa7.61□□□□□ -1.19
HOMER3-204ENST00000539827 KRTAP5-9P26371 169 aa7.6□□□□□ -1.19
HOMER3-204ENST00000539827 MT1MQ8N339 61 aa7.6□□□□□ -1.19
HOMER3-204ENST00000539827 KRTAP4-3Q9BYR4 195 aa7.57□□□□□ -1.2
HOMER3-204ENST00000539827 LCE5AQ5TCM9 118 aa7.53□□□□□ -1.2
HOMER3-204ENST00000539827 NEBP20929 6669 aa7.47□□□□□ -1.21
HOMER3-204ENST00000539827 LCE1AQ5T7P2 110 aa7.4□□□□□ -1.22
HOMER3-204ENST00000539827 SPRR2EP22531 72 aa7.37□□□□□ -1.23
HOMER3-204ENST00000539827 SPRR2BP35325 72 aa7.37□□□□□ -1.23
HOMER3-204ENST00000539827 SPRR2AP35326 72 aa7.37□□□□□ -1.23
HOMER3-204ENST00000539827 LOC100996750A0A140TA64 210 aa7.35□□□□□ -1.23
HOMER3-204ENST00000539827 INE1O15225 51 aa7.28□□□□□ -1.24
HOMER3-204ENST00000539827 DSTQ03001 7570 aaKnown RBP7.12□□□□□ -1.27
HOMER3-204ENST00000539827 SPRR2DP22532 72 aa7.09□□□□□ -1.27
HOMER3-204ENST00000539827 KRTAP2-3P0C7H8 128 aa7.08□□□□□ -1.28
HOMER3-204ENST00000539827 KRTAP2-4Q9BYR9 128 aa7.08□□□□□ -1.28
HOMER3-204ENST00000539827 KRTAP2-1Q9BYU5 128 aa7.08□□□□□ -1.28
HOMER3-204ENST00000539827 KRTAP20-1Q3LI63 56 aa6.99□□□□□ -1.29
HOMER3-204ENST00000539827 LCE3BQ5TA77 95 aa6.86□□□□□ -1.31
HOMER3-204ENST00000539827 KRTAP5-5Q701N2 237 aaPredicted RBP6.79□□□□□ -1.32
HOMER3-204ENST00000539827 MT1AP04731 61 aa6.73□□□□□ -1.33
HOMER3-204ENST00000539827 KRTAP6-1Q3LI64 71 aa6.73□□□□□ -1.33
HOMER3-204ENST00000539827 KRTAP2-2Q9BYT5 123 aa6.71□□□□□ -1.33
HOMER3-204ENST00000539827 SYNE1Q8NF91 8797 aaKnown RBP6.51□□□□□ -1.37
HOMER3-204ENST00000539827 KRTAP9-4Q9BYQ2 154 aa6.39□□□□□ -1.39
HOMER3-204ENST00000539827 KRTAP4-6Q9BYQ5 205 aa6.39□□□□□ -1.39
HOMER3-204ENST00000539827 KRTAP4-9Q9BYQ8 210 aa6.38□□□□□ -1.39
HOMER3-204ENST00000539827 KRTAP5-4Q6L8H1 288 aa6.37□□□□□ -1.39
HOMER3-204ENST00000539827 MT4P47944 62 aa6.27□□□□□ -1.41
HOMER3-204ENST00000539827 KRTAP12-4P60329 112 aa6.25□□□□□ -1.41
HOMER3-204ENST00000539827 LCE1DQ5T752 114 aa6.2□□□□□ -1.42
HOMER3-204ENST00000539827 LCE4AQ5TA78 99 aa6.19□□□□□ -1.42
HOMER3-204ENST00000539827 HMCN1Q96RW7 5635 aa6.17□□□□□ -1.42
HOMER3-204ENST00000539827 KRTAP6-2Q3LI66 62 aa6.17□□□□□ -1.42
HOMER3-204ENST00000539827 MT3P25713 68 aa6.08□□□□□ -1.44
HOMER3-204ENST00000539827 LCE3DQ9BYE3 92 aa6.02□□□□□ -1.45
HOMER3-204ENST00000539827 KRTAP20-2Q3LI61 65 aa5.99□□□□□ -1.45
HOMER3-204ENST00000539827 KRTAP4-12Q9BQ66 201 aa5.97□□□□□ -1.45
HOMER3-204ENST00000539827 LCE3EQ5T5B0 92 aa5.87□□□□□ -1.47
HOMER3-204ENST00000539827 KRTAP5-2Q701N4 177 aa5.82□□□□□ -1.48
HOMER3-204ENST00000539827 KRTAP5-3Q6L8H2 238 aa5.75□□□□□ -1.49
HOMER3-204ENST00000539827 AHNAK2Q8IVF2 5795 aa5.69□□□□□ -1.5
HOMER3-204ENST00000539827 KRTAP9-9Q9BYP9 154 aa5.68□□□□□ -1.5
HOMER3-204ENST00000539827 GPR98Q8WXG9 6306 aa5.65□□□□□ -1.51
HOMER3-204ENST00000539827 OBSCNQ5VST9 7968 aa5.61□□□□□ -1.51
HOMER3-204ENST00000539827 KRTAP5-10Q6L8G5 202 aa5.45□□□□□ -1.54
HOMER3-204ENST00000539827 PRM1P04553 51 aa5.37□□□□□ -1.55
HOMER3-204ENST00000539827 KRTAP4-11Q9BYQ6 195 aa5.25□□□□□ -1.57
HOMER3-204ENST00000539827 LCE1EQ5T753 118 aa5.17□□□□□ -1.58
HOMER3-204ENST00000539827 KRTAP5-7Q6L8G8 165 aa5.09□□□□□ -1.59
HOMER3-204ENST00000539827 KRTAP5-8O75690 187 aa5.07□□□□□ -1.6
HOMER3-204ENST00000539827 KRTAP4-2Q9BYR5 136 aa5.04□□□□□ -1.6
HOMER3-204ENST00000539827 KRTAP5-1Q6L8H4 278 aa5.02□□□□□ -1.61
HOMER3-204ENST00000539827 LCE1BQ5T7P3 118 aa5.01□□□□□ -1.61
HOMER3-204ENST00000539827 MUC5ACP98088 5654 aa4.96□□□□□ -1.61
HOMER3-204ENST00000539827 LCE1CQ5T751 118 aa4.84□□□□□ -1.63
HOMER3-204ENST00000539827 MUC5BQ9HC84 5762 aaPredicted RBP4.68□□□□□ -1.66
HOMER3-204ENST00000539827 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.53□□□□□ -1.68
HOMER3-204ENST00000539827 AHNAKQ09666 5890 aaKnown RBP4.49□□□□□ -1.69
HOMER3-204ENST00000539827 KRTAP21-2Q3LI59 83 aa4.38□□□□□ -1.71
HOMER3-204ENST00000539827 LCE1FQ5T754 118 aa4.24□□□□□ -1.73
HOMER3-204ENST00000539827 KRTAP5-11Q6L8G4 156 aa4.24□□□□□ -1.73
HOMER3-204ENST00000539827 KRTAP4-4Q9BYR3 166 aa3.99□□□□□ -1.77
HOMER3-204ENST00000539827 PHGR1C9JFL3 82 aa3.66□□□□□ -1.82
HOMER3-204ENST00000539827 KRTAP21-1Q3LI58 79 aa3.4□□□□□ -1.87
HOMER3-204ENST00000539827 MUC19Q7Z5P9 8384 aa3.37□□□□□ -1.87
HOMER3-204ENST00000539827 MUC16Q8WXI7 14507 aa2.44□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 130.8 ms