RNA–Protein interactions for RNA: ENST00000539814.5

LDHA-217, Transcript of lactate dehydrogenase A, humanhuman

TSL 4

Gene LDHA, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-217ENST00000539814 PP632Q6XCG6 107 aa3.56□□□□□ -1.84
LDHA-217ENST00000539814 SSPOA2VEC9 5147 aa3.52□□□□□ -1.85
LDHA-217ENST00000539814 A0A0D9SG42 100 aa3.52□□□□□ -1.85
LDHA-217ENST00000539814 M0QZ58 72 aa3.49□□□□□ -1.85
LDHA-217ENST00000539814 CRCT1Q9UGL9 99 aa3.49□□□□□ -1.85
LDHA-217ENST00000539814 SPRR2GQ9BYE4 73 aa3.48□□□□□ -1.85
LDHA-217ENST00000539814 KRTAP9-6A8MVA2 160 aa3.46□□□□□ -1.86
LDHA-217ENST00000539814 MT1BP07438 61 aa3.45□□□□□ -1.86
LDHA-217ENST00000539814 KRTAP12-1P59990 96 aa3.45□□□□□ -1.86
LDHA-217ENST00000539814 KRTAP12-2P59991 146 aa3.44□□□□□ -1.86
LDHA-217ENST00000539814 KRTAP13-4Q3LI77 160 aa3.44□□□□□ -1.86
LDHA-217ENST00000539814 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
LDHA-217ENST00000539814 KRTAP19-8Q3LI54 63 aa3.43□□□□□ -1.86
LDHA-217ENST00000539814 FCGBPQ9Y6R7 5405 aaPredicted RBP3.38□□□□□ -1.87
LDHA-217ENST00000539814 KRTAP19-6Q3LI70 58 aa3.37□□□□□ -1.87
LDHA-217ENST00000539814 SPRR5A0A1B0GTR4 108 aa3.34□□□□□ -1.87
LDHA-217ENST00000539814 MACF1Q9UPN3 7388 aaKnown RBP3.3□□□□□ -1.88
LDHA-217ENST00000539814 SYNE2Q8WXH0 6885 aaKnown RBP3.28□□□□□ -1.88
LDHA-217ENST00000539814 MT1XP80297 61 aa3.28□□□□□ -1.88
LDHA-217ENST00000539814 KRTAP5-1Q6L8H4 278 aa3.27□□□□□ -1.89
LDHA-217ENST00000539814 KMT2DO14686 5537 aa3.15□□□□□ -1.9
LDHA-217ENST00000539814 TNP1P09430 55 aa3.11□□□□□ -1.91
LDHA-217ENST00000539814 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
LDHA-217ENST00000539814 KRTAP5-4Q6L8H1 288 aa3.1□□□□□ -1.91
LDHA-217ENST00000539814 NEBP20929 6669 aa3.07□□□□□ -1.92
LDHA-217ENST00000539814 KRTAP6-3Q3LI67 103 aa3.06□□□□□ -1.92
LDHA-217ENST00000539814 KRTAP8-1Q8IUC2 63 aa3.05□□□□□ -1.92
LDHA-217ENST00000539814 LCE3DQ9BYE3 92 aa3.03□□□□□ -1.92
LDHA-217ENST00000539814 MUC12Q9UKN1 5478 aa3.02□□□□□ -1.93
LDHA-217ENST00000539814 SPRR2FQ96RM1 72 aa3.01□□□□□ -1.93
LDHA-217ENST00000539814 KRTAP5-9P26371 169 aa3□□□□□ -1.93
LDHA-217ENST00000539814 LCE3AQ5TA76 89 aa2.96□□□□□ -1.94
LDHA-217ENST00000539814 MDN1Q9NU22 5596 aa2.94□□□□□ -1.94
LDHA-217ENST00000539814 KRTAP19-7Q3SYF9 63 aa2.93□□□□□ -1.94
LDHA-217ENST00000539814 SPRR2EP22531 72 aa2.92□□□□□ -1.94
LDHA-217ENST00000539814 SPRR2BP35325 72 aa2.92□□□□□ -1.94
LDHA-217ENST00000539814 SPRR2AP35326 72 aa2.92□□□□□ -1.94
LDHA-217ENST00000539814 KRTAP19-5Q3LI72 72 aa2.92□□□□□ -1.94
LDHA-217ENST00000539814 MT1EP04732 61 aa2.89□□□□□ -1.95
LDHA-217ENST00000539814 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
LDHA-217ENST00000539814 SPRR2DP22532 72 aa2.82□□□□□ -1.96
LDHA-217ENST00000539814 KRTAP4-3Q9BYR4 195 aa2.82□□□□□ -1.96
LDHA-217ENST00000539814 KRTAP12-3P60328 96 aa2.81□□□□□ -1.96
LDHA-217ENST00000539814 KRTAP19-3Q7Z4W3 81 aa2.8□□□□□ -1.96
LDHA-217ENST00000539814 MT1LQ93083 61 aa2.79□□□□□ -1.96
LDHA-217ENST00000539814 KRTAP20-1Q3LI63 56 aa2.78□□□□□ -1.96
LDHA-217ENST00000539814 MT1MQ8N339 61 aa2.74□□□□□ -1.97
LDHA-217ENST00000539814 KRTAP2-3P0C7H8 128 aa2.73□□□□□ -1.97
LDHA-217ENST00000539814 MT1GP13640 62 aa2.73□□□□□ -1.97
LDHA-217ENST00000539814 KRTAP5-5Q701N2 237 aaPredicted RBP2.73□□□□□ -1.97
LDHA-217ENST00000539814 KRTAP2-4Q9BYR9 128 aa2.73□□□□□ -1.97
LDHA-217ENST00000539814 DSTQ03001 7570 aaKnown RBP2.67□□□□□ -1.98
LDHA-217ENST00000539814 KRTAP2-1Q9BYU5 128 aa2.65□□□□□ -1.99
LDHA-217ENST00000539814 LCE1CQ5T751 118 aa2.56□□□□□ -2
LDHA-217ENST00000539814 LCE1BQ5T7P3 118 aa2.56□□□□□ -2
LDHA-217ENST00000539814 GPR98Q8WXG9 6306 aa2.54□□□□□ -2
LDHA-217ENST00000539814 KRTAP5-2Q701N4 177 aa2.53□□□□□ -2
LDHA-217ENST00000539814 MT4P47944 62 aa2.48□□□□□ -2.01
LDHA-217ENST00000539814 SYNE1Q8NF91 8797 aaKnown RBP2.44□□□□□ -2.02
LDHA-217ENST00000539814 HMCN1Q96RW7 5635 aa2.42□□□□□ -2.02
LDHA-217ENST00000539814 KRTAP6-1Q3LI64 71 aa2.37□□□□□ -2.03
LDHA-217ENST00000539814 MT1AP04731 61 aa2.36□□□□□ -2.03
LDHA-217ENST00000539814 KRTAP20-2Q3LI61 65 aa2.33□□□□□ -2.04
LDHA-217ENST00000539814 KRTAP12-4P60329 112 aa2.32□□□□□ -2.04
LDHA-217ENST00000539814 AHNAK2Q8IVF2 5795 aa2.29□□□□□ -2.04
LDHA-217ENST00000539814 KRTAP6-2Q3LI66 62 aa2.22□□□□□ -2.05
LDHA-217ENST00000539814 KRTAP5-10Q6L8G5 202 aa2.16□□□□□ -2.06
LDHA-217ENST00000539814 KRTAP5-7Q6L8G8 165 aa2.13□□□□□ -2.07
LDHA-217ENST00000539814 PRM1P04553 51 aa2.09□□□□□ -2.07
LDHA-217ENST00000539814 KRTAP5-8O75690 187 aa2.07□□□□□ -2.08
LDHA-217ENST00000539814 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
LDHA-217ENST00000539814 MUC5ACP98088 5654 aa1.92□□□□□ -2.1
LDHA-217ENST00000539814 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
LDHA-217ENST00000539814 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
LDHA-217ENST00000539814 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
LDHA-217ENST00000539814 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
LDHA-217ENST00000539814 PHGR1C9JFL3 82 aa1.37□□□□□ -2.19
LDHA-217ENST00000539814 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 36.8 ms