RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 LCE3AQ5TA76 89 aa5.83□□□□□ -1.48
DDB1-216ENST00000539739 MUC12Q9UKN1 5478 aa5.74□□□□□ -1.49
DDB1-216ENST00000539739 KRTAP19-5Q3LI72 72 aa5.74□□□□□ -1.49
DDB1-216ENST00000539739 KRTAP19-7Q3SYF9 63 aa5.74□□□□□ -1.49
DDB1-216ENST00000539739 MT1EP04732 61 aa5.68□□□□□ -1.5
DDB1-216ENST00000539739 SPRR2EP22531 72 aa5.67□□□□□ -1.5
DDB1-216ENST00000539739 SPRR2BP35325 72 aa5.67□□□□□ -1.5
DDB1-216ENST00000539739 SPRR2AP35326 72 aa5.67□□□□□ -1.5
DDB1-216ENST00000539739 MDN1Q9NU22 5596 aa5.67□□□□□ -1.5
DDB1-216ENST00000539739 LCE1AQ5T7P2 110 aa5.64□□□□□ -1.51
DDB1-216ENST00000539739 KRTAP12-3P60328 96 aa5.63□□□□□ -1.51
DDB1-216ENST00000539739 NEBP20929 6669 aa5.57□□□□□ -1.52
DDB1-216ENST00000539739 KRTAP19-3Q7Z4W3 81 aa5.55□□□□□ -1.52
DDB1-216ENST00000539739 MT1LQ93083 61 aa5.51□□□□□ -1.53
DDB1-216ENST00000539739 LCE5AQ5TCM9 118 aa5.49□□□□□ -1.53
DDB1-216ENST00000539739 MT1GP13640 62 aa5.48□□□□□ -1.53
DDB1-216ENST00000539739 SPRR2DP22532 72 aa5.48□□□□□ -1.53
DDB1-216ENST00000539739 LOC100996750A0A140TA64 210 aa5.37□□□□□ -1.55
DDB1-216ENST00000539739 MT1MQ8N339 61 aa5.37□□□□□ -1.55
DDB1-216ENST00000539739 KRTAP4-6Q9BYQ5 205 aa5.37□□□□□ -1.55
DDB1-216ENST00000539739 KRTAP19-4Q3LI73 84 aa5.37□□□□□ -1.55
DDB1-216ENST00000539739 KRTAP20-1Q3LI63 56 aa5.36□□□□□ -1.55
DDB1-216ENST00000539739 KRTAP2-3P0C7H8 128 aa5.35□□□□□ -1.55
DDB1-216ENST00000539739 KRTAP2-4Q9BYR9 128 aa5.35□□□□□ -1.55
DDB1-216ENST00000539739 LCE3BQ5TA77 95 aa5.29□□□□□ -1.56
DDB1-216ENST00000539739 KRTAP4-7Q9BYR0 210 aa5.24□□□□□ -1.57
DDB1-216ENST00000539739 DSTQ03001 7570 aaKnown RBP5.23□□□□□ -1.57
DDB1-216ENST00000539739 LCE3CQ5T5A8 94 aa5.23□□□□□ -1.57
DDB1-216ENST00000539739 KRTAP2-2Q9BYT5 123 aa5.22□□□□□ -1.57
DDB1-216ENST00000539739 KRTAP2-1Q9BYU5 128 aa5.22□□□□□ -1.57
DDB1-216ENST00000539739 KRTAP4-3Q9BYR4 195 aa5.21□□□□□ -1.58
DDB1-216ENST00000539739 KRTAP4-12Q9BQ66 201 aa5.03□□□□□ -1.6
DDB1-216ENST00000539739 LCE4AQ5TA78 99 aa4.9□□□□□ -1.63
DDB1-216ENST00000539739 KRTAP9-6A8MVA2 160 aa4.88□□□□□ -1.63
DDB1-216ENST00000539739 KRTAP5-5Q701N2 237 aaPredicted RBP4.86□□□□□ -1.63
DDB1-216ENST00000539739 KRTAP5-4Q6L8H1 288 aa4.84□□□□□ -1.63
DDB1-216ENST00000539739 KRTAP9-9Q9BYP9 154 aa4.79□□□□□ -1.64
DDB1-216ENST00000539739 KRTAP9-4Q9BYQ2 154 aa4.79□□□□□ -1.64
DDB1-216ENST00000539739 KRTAP4-9Q9BYQ8 210 aa4.79□□□□□ -1.64
DDB1-216ENST00000539739 MT4P47944 62 aa4.75□□□□□ -1.65
DDB1-216ENST00000539739 LCE1DQ5T752 114 aa4.73□□□□□ -1.65
DDB1-216ENST00000539739 MT1AP04731 61 aa4.7□□□□□ -1.66
DDB1-216ENST00000539739 KRTAP12-4P60329 112 aa4.68□□□□□ -1.66
DDB1-216ENST00000539739 SYNE1Q8NF91 8797 aaKnown RBP4.65□□□□□ -1.66
DDB1-216ENST00000539739 KRTAP6-1Q3LI64 71 aa4.63□□□□□ -1.67
DDB1-216ENST00000539739 HMCN1Q96RW7 5635 aa4.61□□□□□ -1.67
DDB1-216ENST00000539739 KRTAP20-2Q3LI61 65 aa4.55□□□□□ -1.68
DDB1-216ENST00000539739 KRTAP5-3Q6L8H2 238 aa4.39□□□□□ -1.71
DDB1-216ENST00000539739 KRTAP6-2Q3LI66 62 aa4.35□□□□□ -1.71
DDB1-216ENST00000539739 KRTAP5-2Q701N4 177 aa4.32□□□□□ -1.72
DDB1-216ENST00000539739 MT3P25713 68 aa4.3□□□□□ -1.72
DDB1-216ENST00000539739 KRTAP4-11Q9BYQ6 195 aa4.3□□□□□ -1.72
DDB1-216ENST00000539739 AHNAK2Q8IVF2 5795 aa4.25□□□□□ -1.73
DDB1-216ENST00000539739 KRTAP4-2Q9BYR5 136 aa4.23□□□□□ -1.73
DDB1-216ENST00000539739 GPR98Q8WXG9 6306 aa4.15□□□□□ -1.74
DDB1-216ENST00000539739 KRTAP5-10Q6L8G5 202 aa4.15□□□□□ -1.74
DDB1-216ENST00000539739 OBSCNQ5VST9 7968 aa4□□□□□ -1.77
DDB1-216ENST00000539739 KRTAP5-7Q6L8G8 165 aa3.93□□□□□ -1.78
DDB1-216ENST00000539739 PRM1P04553 51 aa3.92□□□□□ -1.78
DDB1-216ENST00000539739 KRTAP5-8O75690 187 aa3.89□□□□□ -1.79
DDB1-216ENST00000539739 LCE3DQ9BYE3 92 aa3.88□□□□□ -1.79
DDB1-216ENST00000539739 LCE3EQ5T5B0 92 aa3.87□□□□□ -1.79
DDB1-216ENST00000539739 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
DDB1-216ENST00000539739 KRTAP5-1Q6L8H4 278 aa3.79□□□□□ -1.8
DDB1-216ENST00000539739 MUC5ACP98088 5654 aa3.66□□□□□ -1.82
DDB1-216ENST00000539739 LCE1BQ5T7P3 118 aa3.58□□□□□ -1.84
DDB1-216ENST00000539739 LCE1CQ5T751 118 aa3.55□□□□□ -1.84
DDB1-216ENST00000539739 MUC5BQ9HC84 5762 aaPredicted RBP3.46□□□□□ -1.86
DDB1-216ENST00000539739 AHNAKQ09666 5890 aaKnown RBP3.35□□□□□ -1.87
DDB1-216ENST00000539739 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
DDB1-216ENST00000539739 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.27□□□□□ -1.89
DDB1-216ENST00000539739 KRTAP5-11Q6L8G4 156 aa3.16□□□□□ -1.9
DDB1-216ENST00000539739 KRTAP21-2Q3LI59 83 aa3.04□□□□□ -1.92
DDB1-216ENST00000539739 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
DDB1-216ENST00000539739 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
DDB1-216ENST00000539739 PHGR1C9JFL3 82 aa2.71□□□□□ -1.97
DDB1-216ENST00000539739 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
DDB1-216ENST00000539739 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 98.5 ms