RNA–Protein interactions for RNA: ENST00000539479.5

MDM2-225, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-225ENST00000539479 SPINT4Q6UDR6 99 aa2.64□□□□□ -1.99
MDM2-225ENST00000539479 PRO0628Q9UI54 55 aa2.64□□□□□ -1.99
MDM2-225ENST00000539479 KRTAP10-12P60413 245 aa2.63□□□□□ -1.99
MDM2-225ENST00000539479 C10orf95Q9H7T3 257 aa2.62□□□□□ -1.99
MDM2-225ENST00000539479 SSPOA2VEC9 5147 aa2.58□□□□□ -2
MDM2-225ENST00000539479 KRTAP19-6Q3LI70 58 aa2.56□□□□□ -2
MDM2-225ENST00000539479 PLAC4Q8WY50 150 aa2.56□□□□□ -2
MDM2-225ENST00000539479 PMAIP1Q13794 54 aa2.55□□□□□ -2
MDM2-225ENST00000539479 CAMK2N1Q7Z7J9 78 aa2.53□□□□□ -2
MDM2-225ENST00000539479 ROMO1P60602 79 aa2.52□□□□□ -2.01
MDM2-225ENST00000539479 K7ERS5 55 aa2.51□□□□□ -2.01
MDM2-225ENST00000539479 FCGBPQ9Y6R7 5405 aaPredicted RBP2.49□□□□□ -2.01
MDM2-225ENST00000539479 LCE1FQ5T754 118 aa2.45□□□□□ -2.02
MDM2-225ENST00000539479 KTN1-AS1Q86SY8 53 aa2.45□□□□□ -2.02
MDM2-225ENST00000539479 CRCT1Q9UGL9 99 aa2.45□□□□□ -2.02
MDM2-225ENST00000539479 FSIP2Q5CZC0 6907 aa2.45□□□□□ -2.02
MDM2-225ENST00000539479 LCE3AQ5TA76 89 aa2.44□□□□□ -2.02
MDM2-225ENST00000539479 KRTAP25-1Q3LHN0 102 aa2.43□□□□□ -2.02
MDM2-225ENST00000539479 PRO2289Q9P1D8 64 aa2.43□□□□□ -2.02
MDM2-225ENST00000539479 TNP1P09430 55 aa2.42□□□□□ -2.02
MDM2-225ENST00000539479 KMT2DO14686 5537 aa2.4□□□□□ -2.03
MDM2-225ENST00000539479 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
MDM2-225ENST00000539479 KRTAP19-7Q3SYF9 63 aa2.37□□□□□ -2.03
MDM2-225ENST00000539479 LCE3CQ5T5A8 94 aa2.37□□□□□ -2.03
MDM2-225ENST00000539479 KRTAP8-1Q8IUC2 63 aa2.37□□□□□ -2.03
MDM2-225ENST00000539479 KRTAP19-5Q3LI72 72 aa2.35□□□□□ -2.03
MDM2-225ENST00000539479 MT1EP04732 61 aa2.3□□□□□ -2.04
MDM2-225ENST00000539479 KRTAP12-3P60328 96 aa2.3□□□□□ -2.04
MDM2-225ENST00000539479 PP632Q6XCG6 107 aa2.29□□□□□ -2.04
MDM2-225ENST00000539479 MACF1Q9UPN3 7388 aaKnown RBP2.28□□□□□ -2.04
MDM2-225ENST00000539479 MT1LQ93083 61 aa2.25□□□□□ -2.05
MDM2-225ENST00000539479 MUC12Q9UKN1 5478 aa2.23□□□□□ -2.05
MDM2-225ENST00000539479 SPRR2FQ96RM1 72 aa2.22□□□□□ -2.05
MDM2-225ENST00000539479 KRTAP6-3Q3LI67 103 aa2.21□□□□□ -2.06
MDM2-225ENST00000539479 KRTAP19-3Q7Z4W3 81 aa2.19□□□□□ -2.06
MDM2-225ENST00000539479 SYNE2Q8WXH0 6885 aaKnown RBP2.18□□□□□ -2.06
MDM2-225ENST00000539479 SPRR5A0A1B0GTR4 108 aa2.16□□□□□ -2.06
MDM2-225ENST00000539479 KRTAP5-5Q701N2 237 aaPredicted RBP2.16□□□□□ -2.06
MDM2-225ENST00000539479 MT1MQ8N339 61 aa2.16□□□□□ -2.06
MDM2-225ENST00000539479 LCE3EQ5T5B0 92 aa2.15□□□□□ -2.07
MDM2-225ENST00000539479 MDN1Q9NU22 5596 aa2.15□□□□□ -2.07
MDM2-225ENST00000539479 MT1GP13640 62 aa2.13□□□□□ -2.07
MDM2-225ENST00000539479 SPRR2EP22531 72 aa2.12□□□□□ -2.07
MDM2-225ENST00000539479 SPRR2BP35325 72 aa2.12□□□□□ -2.07
MDM2-225ENST00000539479 SPRR2AP35326 72 aa2.12□□□□□ -2.07
MDM2-225ENST00000539479 LCE1CQ5T751 118 aa2.12□□□□□ -2.07
MDM2-225ENST00000539479 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
MDM2-225ENST00000539479 LUZP6Q538Z0 58 aa2.06□□□□□ -2.08
MDM2-225ENST00000539479 NEBP20929 6669 aa2.04□□□□□ -2.08
MDM2-225ENST00000539479 SPRR2DP22532 72 aa2.03□□□□□ -2.08
MDM2-225ENST00000539479 DSTQ03001 7570 aaKnown RBP1.99□□□□□ -2.09
MDM2-225ENST00000539479 KRTAP6-1Q3LI64 71 aa1.92□□□□□ -2.1
MDM2-225ENST00000539479 KRTAP2-3P0C7H8 128 aa1.91□□□□□ -2.1
MDM2-225ENST00000539479 KRTAP2-4Q9BYR9 128 aa1.91□□□□□ -2.1
MDM2-225ENST00000539479 KRTAP2-1Q9BYU5 128 aa1.91□□□□□ -2.1
MDM2-225ENST00000539479 MT1AP04731 61 aa1.89□□□□□ -2.11
MDM2-225ENST00000539479 KRTAP20-1Q3LI63 56 aa1.88□□□□□ -2.11
MDM2-225ENST00000539479 HMCN1Q96RW7 5635 aa1.83□□□□□ -2.12
MDM2-225ENST00000539479 SYNE1Q8NF91 8797 aaKnown RBP1.82□□□□□ -2.12
MDM2-225ENST00000539479 MT4P47944 62 aa1.78□□□□□ -2.12
MDM2-225ENST00000539479 KRTAP20-2Q3LI61 65 aa1.77□□□□□ -2.13
MDM2-225ENST00000539479 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
MDM2-225ENST00000539479 LCE3DQ9BYE3 92 aa1.75□□□□□ -2.13
MDM2-225ENST00000539479 KRTAP6-2Q3LI66 62 aa1.74□□□□□ -2.13
MDM2-225ENST00000539479 KRTAP12-4P60329 112 aa1.73□□□□□ -2.13
MDM2-225ENST00000539479 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
MDM2-225ENST00000539479 AHNAK2Q8IVF2 5795 aa1.59□□□□□ -2.16
MDM2-225ENST00000539479 KRTAP5-10Q6L8G5 202 aa1.53□□□□□ -2.16
MDM2-225ENST00000539479 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
MDM2-225ENST00000539479 INE1O15225 51 aa1.5□□□□□ -2.17
MDM2-225ENST00000539479 MUC5ACP98088 5654 aa1.41□□□□□ -2.18
MDM2-225ENST00000539479 GPR98Q8WXG9 6306 aa1.36□□□□□ -2.19
MDM2-225ENST00000539479 PRM1P04553 51 aa1.35□□□□□ -2.19
MDM2-225ENST00000539479 MUC5BQ9HC84 5762 aaPredicted RBP1.26□□□□□ -2.21
MDM2-225ENST00000539479 AHNAKQ09666 5890 aaKnown RBP1.16□□□□□ -2.22
MDM2-225ENST00000539479 PHGR1C9JFL3 82 aa1.06□□□□□ -2.24
MDM2-225ENST00000539479 KRTAP21-1Q3LI58 79 aa0.84□□□□□ -2.27
MDM2-225ENST00000539479 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms