RNA–Protein interactions for RNA: ENST00000539369.1

LDHC-206, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-206ENST00000539369 RPL37P61927 97 aaKnown RBP2.41□□□□□ -2.02
LDHC-206ENST00000539369 MIR22HGQ0VDD5 57 aa2.41□□□□□ -2.02
LDHC-206ENST00000539369 KRTAP19-6Q3LI70 58 aa2.4□□□□□ -2.03
LDHC-206ENST00000539369 PP632Q6XCG6 107 aa2.39□□□□□ -2.03
LDHC-206ENST00000539369 KRTAP10-10P60014 251 aa2.37□□□□□ -2.03
LDHC-206ENST00000539369 KRTAP20-1Q3LI63 56 aa2.37□□□□□ -2.03
LDHC-206ENST00000539369 Q5W150 140 aa2.37□□□□□ -2.03
LDHC-206ENST00000539369 MUC12Q9UKN1 5478 aa2.36□□□□□ -2.03
LDHC-206ENST00000539369 CSAG1Q6PB30 78 aa2.32□□□□□ -2.04
LDHC-206ENST00000539369 ADM2Q7Z4H4 148 aa2.32□□□□□ -2.04
LDHC-206ENST00000539369 K7ERS5 55 aa2.31□□□□□ -2.04
LDHC-206ENST00000539369 KMT2DO14686 5537 aa2.3□□□□□ -2.04
LDHC-206ENST00000539369 MDN1Q9NU22 5596 aa2.3□□□□□ -2.04
LDHC-206ENST00000539369 A8MUU9 505 aa2.29□□□□□ -2.04
LDHC-206ENST00000539369 KRTAP25-1Q3LHN0 102 aa2.29□□□□□ -2.04
LDHC-206ENST00000539369 C20orf166-AS1Q96NR2 134 aa2.29□□□□□ -2.04
LDHC-206ENST00000539369 A0A1B0GU33 70 aa2.26□□□□□ -2.05
LDHC-206ENST00000539369 ROMO1P60602 79 aa2.26□□□□□ -2.05
LDHC-206ENST00000539369 CAMK2N1Q7Z7J9 78 aa2.26□□□□□ -2.05
LDHC-206ENST00000539369 H0YAA0 97 aa2.24□□□□□ -2.05
LDHC-206ENST00000539369 H1FX-AS1Q4G0G2 97 aa2.24□□□□□ -2.05
LDHC-206ENST00000539369 KRTAP2-3P0C7H8 128 aa2.23□□□□□ -2.05
LDHC-206ENST00000539369 KRTAP2-4Q9BYR9 128 aa2.23□□□□□ -2.05
LDHC-206ENST00000539369 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
LDHC-206ENST00000539369 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
LDHC-206ENST00000539369 SPINT4Q6UDR6 99 aa2.16□□□□□ -2.06
LDHC-206ENST00000539369 MT1BP07438 61 aa2.15□□□□□ -2.07
LDHC-206ENST00000539369 KRTAP2-1Q9BYU5 128 aa2.15□□□□□ -2.07
LDHC-206ENST00000539369 P0C880 135 aa2.13□□□□□ -2.07
LDHC-206ENST00000539369 SPRR2EP22531 72 aa2.13□□□□□ -2.07
LDHC-206ENST00000539369 SPRR2BP35325 72 aa2.13□□□□□ -2.07
LDHC-206ENST00000539369 SPRR2AP35326 72 aa2.13□□□□□ -2.07
LDHC-206ENST00000539369 CRIPTQ9P021 101 aa2.13□□□□□ -2.07
LDHC-206ENST00000539369 SPRR2FQ96RM1 72 aa2.11□□□□□ -2.07
LDHC-206ENST00000539369 S4R3F8 94 aa2.1□□□□□ -2.07
LDHC-206ENST00000539369 KRTAP19-8Q3LI54 63 aa2.09□□□□□ -2.07
LDHC-206ENST00000539369 M0QZ58 72 aa2.07□□□□□ -2.08
LDHC-206ENST00000539369 A0A0D9SG42 100 aa2.06□□□□□ -2.08
LDHC-206ENST00000539369 SPRR2DP22532 72 aa2.06□□□□□ -2.08
LDHC-206ENST00000539369 KRTAP13-4Q3LI77 160 aa2.05□□□□□ -2.08
LDHC-206ENST00000539369 SPRR2GQ9BYE4 73 aa2.05□□□□□ -2.08
LDHC-206ENST00000539369 KRTAP12-1P59990 96 aa2.02□□□□□ -2.09
LDHC-206ENST00000539369 C10orf95Q9H7T3 257 aa2.02□□□□□ -2.09
LDHC-206ENST00000539369 KRTAP8-1Q8IUC2 63 aa2.01□□□□□ -2.09
LDHC-206ENST00000539369 SPRR5A0A1B0GTR4 108 aa2□□□□□ -2.09
LDHC-206ENST00000539369 DSTQ03001 7570 aaKnown RBP2□□□□□ -2.09
LDHC-206ENST00000539369 LUZP6Q538Z0 58 aa1.97□□□□□ -2.09
LDHC-206ENST00000539369 PLAC4Q8WY50 150 aa1.96□□□□□ -2.1
LDHC-206ENST00000539369 MT1XP80297 61 aa1.95□□□□□ -2.1
LDHC-206ENST00000539369 R4GN34 69 aa1.95□□□□□ -2.1
LDHC-206ENST00000539369 HMCN1Q96RW7 5635 aa1.92□□□□□ -2.1
LDHC-206ENST00000539369 PRO2289Q9P1D8 64 aa1.91□□□□□ -2.1
LDHC-206ENST00000539369 KRTAP5-10Q6L8G5 202 aa1.89□□□□□ -2.11
LDHC-206ENST00000539369 AHNAK2Q8IVF2 5795 aa1.89□□□□□ -2.11
LDHC-206ENST00000539369 TNP1P09430 55 aa1.84□□□□□ -2.11
LDHC-206ENST00000539369 MT4P47944 62 aa1.83□□□□□ -2.12
LDHC-206ENST00000539369 INE1O15225 51 aa1.82□□□□□ -2.12
LDHC-206ENST00000539369 KRTAP19-3Q7Z4W3 81 aa1.76□□□□□ -2.13
LDHC-206ENST00000539369 KRTAP19-7Q3SYF9 63 aa1.75□□□□□ -2.13
LDHC-206ENST00000539369 MT1EP04732 61 aa1.74□□□□□ -2.13
LDHC-206ENST00000539369 MT1GP13640 62 aa1.68□□□□□ -2.14
LDHC-206ENST00000539369 KRTAP12-4P60329 112 aa1.68□□□□□ -2.14
LDHC-206ENST00000539369 MT1MQ8N339 61 aa1.67□□□□□ -2.14
LDHC-206ENST00000539369 KRTAP20-2Q3LI61 65 aa1.66□□□□□ -2.14
LDHC-206ENST00000539369 AHNAKQ09666 5890 aaKnown RBP1.66□□□□□ -2.14
LDHC-206ENST00000539369 MUC5BQ9HC84 5762 aaPredicted RBP1.64□□□□□ -2.15
LDHC-206ENST00000539369 KRTAP19-5Q3LI72 72 aa1.63□□□□□ -2.15
LDHC-206ENST00000539369 MUC5ACP98088 5654 aa1.62□□□□□ -2.15
LDHC-206ENST00000539369 KRTAP12-3P60328 96 aa1.62□□□□□ -2.15
LDHC-206ENST00000539369 MT1LQ93083 61 aa1.62□□□□□ -2.15
LDHC-206ENST00000539369 SYNE1Q8NF91 8797 aaKnown RBP1.53□□□□□ -2.16
LDHC-206ENST00000539369 KRTAP6-1Q3LI64 71 aa1.39□□□□□ -2.19
LDHC-206ENST00000539369 KRTAP6-2Q3LI66 62 aa1.37□□□□□ -2.19
LDHC-206ENST00000539369 MT1AP04731 61 aa1.36□□□□□ -2.19
LDHC-206ENST00000539369 PRM1P04553 51 aa1.15□□□□□ -2.23
LDHC-206ENST00000539369 PHGR1C9JFL3 82 aa1.1□□□□□ -2.23
LDHC-206ENST00000539369 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
LDHC-206ENST00000539369 KRTAP21-1Q3LI58 79 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 56.4 ms