RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 MT1GP13640 62 aa8.02□□□□□ -1.13
SCARB1-206ENST00000539320 KRTAP4-9Q9BYQ8 210 aa8□□□□□ -1.13
SCARB1-206ENST00000539320 PP632Q6XCG6 107 aa7.98□□□□□ -1.13
SCARB1-206ENST00000539320 CDC42SE1Q9NRR8 79 aa7.97□□□□□ -1.13
SCARB1-206ENST00000539320 MT1MQ8N339 61 aa7.91□□□□□ -1.14
SCARB1-206ENST00000539320 MT1LQ93083 61 aa7.91□□□□□ -1.14
SCARB1-206ENST00000539320 K7ERS5 55 aa7.88□□□□□ -1.15
SCARB1-206ENST00000539320 LCE3AQ5TA76 89 aa7.87□□□□□ -1.15
SCARB1-206ENST00000539320 TNP1P09430 55 aa7.86□□□□□ -1.15
SCARB1-206ENST00000539320 BRK1Q8WUW1 75 aa7.86□□□□□ -1.15
SCARB1-206ENST00000539320 C10orf95Q9H7T3 257 aa7.85□□□□□ -1.15
SCARB1-206ENST00000539320 LCE1DQ5T752 114 aa7.82□□□□□ -1.16
SCARB1-206ENST00000539320 LCE4AQ5TA78 99 aa7.79□□□□□ -1.16
SCARB1-206ENST00000539320 HMCN1Q96RW7 5635 aa7.74□□□□□ -1.17
SCARB1-206ENST00000539320 MT4P47944 62 aa7.71□□□□□ -1.18
SCARB1-206ENST00000539320 KRTAP4-3Q9BYR4 195 aa7.71□□□□□ -1.18
SCARB1-206ENST00000539320 KRTAP5-4Q6L8H1 288 aa7.61□□□□□ -1.19
SCARB1-206ENST00000539320 AHNAK2Q8IVF2 5795 aa7.56□□□□□ -1.2
SCARB1-206ENST00000539320 KRTAP12-3P60328 96 aa7.56□□□□□ -1.2
SCARB1-206ENST00000539320 ROMO1P60602 79 aa7.51□□□□□ -1.21
SCARB1-206ENST00000539320 KRTAP4-7Q9BYR0 210 aa7.48□□□□□ -1.21
SCARB1-206ENST00000539320 KRTAP4-6Q9BYQ5 205 aa7.46□□□□□ -1.22
SCARB1-206ENST00000539320 PRO0628Q9UI54 55 aa7.42□□□□□ -1.22
SCARB1-206ENST00000539320 KRTAP25-1Q3LHN0 102 aa7.4□□□□□ -1.22
SCARB1-206ENST00000539320 PMAIP1Q13794 54 aa7.39□□□□□ -1.23
SCARB1-206ENST00000539320 KRTAP5-10Q6L8G5 202 aa7.33□□□□□ -1.24
SCARB1-206ENST00000539320 KRTAP5-5Q701N2 237 aaPredicted RBP7.26□□□□□ -1.25
SCARB1-206ENST00000539320 KRTAP20-2Q3LI61 65 aa7.2□□□□□ -1.26
SCARB1-206ENST00000539320 SPRR5A0A1B0GTR4 108 aa7.14□□□□□ -1.27
SCARB1-206ENST00000539320 KRTAP5-3Q6L8H2 238 aa7.14□□□□□ -1.27
SCARB1-206ENST00000539320 LOC100996750A0A140TA64 210 aa7.1□□□□□ -1.27
SCARB1-206ENST00000539320 KRTAP12-4P60329 112 aa7.1□□□□□ -1.27
SCARB1-206ENST00000539320 KRTAP19-4Q3LI73 84 aa7.1□□□□□ -1.27
SCARB1-206ENST00000539320 KRTAP23-1A1A580 65 aa7.08□□□□□ -1.28
SCARB1-206ENST00000539320 SYNE1Q8NF91 8797 aaKnown RBP7.07□□□□□ -1.28
SCARB1-206ENST00000539320 KRTAP5-7Q6L8G8 165 aa7.07□□□□□ -1.28
SCARB1-206ENST00000539320 PRAC1Q96KF2 57 aa7.03□□□□□ -1.28
SCARB1-206ENST00000539320 KRTAP15-1Q3LI76 137 aa7.01□□□□□ -1.29
SCARB1-206ENST00000539320 KTN1-AS1Q86SY8 53 aa6.95□□□□□ -1.3
SCARB1-206ENST00000539320 LCE3CQ5T5A8 94 aa6.93□□□□□ -1.3
SCARB1-206ENST00000539320 H3BS24 57 aa6.86□□□□□ -1.31
SCARB1-206ENST00000539320 MT1AP04731 61 aa6.74□□□□□ -1.33
SCARB1-206ENST00000539320 KRTAP6-1Q3LI64 71 aa6.68□□□□□ -1.34
SCARB1-206ENST00000539320 KRTAP5-2Q701N4 177 aa6.66□□□□□ -1.34
SCARB1-206ENST00000539320 SVIPQ8NHG7 77 aa6.65□□□□□ -1.34
SCARB1-206ENST00000539320 KRTAP4-11Q9BYQ6 195 aa6.6□□□□□ -1.35
SCARB1-206ENST00000539320 KRTAP9-6A8MVA2 160 aa6.55□□□□□ -1.36
SCARB1-206ENST00000539320 KRTAP9-4Q9BYQ2 154 aa6.48□□□□□ -1.37
SCARB1-206ENST00000539320 KRTAP6-2Q3LI66 62 aa6.41□□□□□ -1.38
SCARB1-206ENST00000539320 KRTAP5-8O75690 187 aa6.37□□□□□ -1.39
SCARB1-206ENST00000539320 AHNAKQ09666 5890 aaKnown RBP6.27□□□□□ -1.41
SCARB1-206ENST00000539320 MUC5BQ9HC84 5762 aaPredicted RBP6.23□□□□□ -1.41
SCARB1-206ENST00000539320 OBSCNQ5VST9 7968 aa6.23□□□□□ -1.41
SCARB1-206ENST00000539320 MUC5ACP98088 5654 aa6.19□□□□□ -1.42
SCARB1-206ENST00000539320 MT3P25713 68 aa6.15□□□□□ -1.42
SCARB1-206ENST00000539320 KRTAP9-9Q9BYP9 154 aa6.08□□□□□ -1.44
SCARB1-206ENST00000539320 KRTAP5-1Q6L8H4 278 aa5.98□□□□□ -1.45
SCARB1-206ENST00000539320 KRTAP4-12Q9BQ66 201 aa5.82□□□□□ -1.48
SCARB1-206ENST00000539320 LUZP6Q538Z0 58 aa5.73□□□□□ -1.49
SCARB1-206ENST00000539320 LCE1EQ5T753 118 aa5.67□□□□□ -1.5
SCARB1-206ENST00000539320 KRTAP4-2Q9BYR5 136 aa5.39□□□□□ -1.55
SCARB1-206ENST00000539320 LCE1BQ5T7P3 118 aa5.37□□□□□ -1.55
SCARB1-206ENST00000539320 NDUFAF8A1L188 74 aa5.36□□□□□ -1.55
SCARB1-206ENST00000539320 LCE1CQ5T751 118 aa5.26□□□□□ -1.57
SCARB1-206ENST00000539320 LCE3DQ9BYE3 92 aa4.96□□□□□ -1.62
SCARB1-206ENST00000539320 A0A0A0MQY5 61 aa4.84□□□□□ -1.63
SCARB1-206ENST00000539320 KRTAP5-11Q6L8G4 156 aa4.81□□□□□ -1.64
SCARB1-206ENST00000539320 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.78□□□□□ -1.64
SCARB1-206ENST00000539320 LCE1FQ5T754 118 aa4.69□□□□□ -1.66
SCARB1-206ENST00000539320 LCE3EQ5T5B0 92 aa4.65□□□□□ -1.67
SCARB1-206ENST00000539320 KRTAP21-2Q3LI59 83 aa4.4□□□□□ -1.71
SCARB1-206ENST00000539320 INE1O15225 51 aa4.34□□□□□ -1.71
SCARB1-206ENST00000539320 PHGR1C9JFL3 82 aa4.28□□□□□ -1.72
SCARB1-206ENST00000539320 KRTAP4-4Q9BYR3 166 aa4.05□□□□□ -1.76
SCARB1-206ENST00000539320 PRM1P04553 51 aa3.92□□□□□ -1.78
SCARB1-206ENST00000539320 MUC19Q7Z5P9 8384 aa3.87□□□□□ -1.79
SCARB1-206ENST00000539320 KRTAP21-1Q3LI58 79 aa3.26□□□□□ -1.89
SCARB1-206ENST00000539320 MUC16Q8WXI7 14507 aa2.77□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms