RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 LOC100996750A0A140TA64 210 aa6.88□□□□□ -1.31
EFCAB11-202ENST00000538485 KRTAP4-6Q9BYQ5 205 aa6.88□□□□□ -1.31
EFCAB11-202ENST00000538485 KRTAP19-3Q7Z4W3 81 aa6.86□□□□□ -1.31
EFCAB11-202ENST00000538485 KRTAP9-7A8MTY7 169 aa6.82□□□□□ -1.32
EFCAB11-202ENST00000538485 LCE1AQ5T7P2 110 aa6.79□□□□□ -1.32
EFCAB11-202ENST00000538485 MT1GP13640 62 aa6.78□□□□□ -1.32
EFCAB11-202ENST00000538485 LCE3CQ5T5A8 94 aa6.78□□□□□ -1.32
EFCAB11-202ENST00000538485 LCE5AQ5TCM9 118 aa6.77□□□□□ -1.33
EFCAB11-202ENST00000538485 KRTAP4-7Q9BYR0 210 aa6.76□□□□□ -1.33
EFCAB11-202ENST00000538485 KRTAP19-4Q3LI73 84 aa6.75□□□□□ -1.33
EFCAB11-202ENST00000538485 SPRR2EP22531 72 aa6.73□□□□□ -1.33
EFCAB11-202ENST00000538485 SPRR2BP35325 72 aa6.73□□□□□ -1.33
EFCAB11-202ENST00000538485 SPRR2AP35326 72 aa6.73□□□□□ -1.33
EFCAB11-202ENST00000538485 MT1MQ8N339 61 aa6.7□□□□□ -1.34
EFCAB11-202ENST00000538485 SPRR5A0A1B0GTR4 108 aa6.64□□□□□ -1.35
EFCAB11-202ENST00000538485 DSTQ03001 7570 aaKnown RBP6.62□□□□□ -1.35
EFCAB11-202ENST00000538485 KRTAP4-3Q9BYR4 195 aa6.6□□□□□ -1.35
EFCAB11-202ENST00000538485 NEBP20929 6669 aa6.58□□□□□ -1.36
EFCAB11-202ENST00000538485 SPRR2DP22532 72 aa6.49□□□□□ -1.37
EFCAB11-202ENST00000538485 KRTAP9-6A8MVA2 160 aa6.45□□□□□ -1.38
EFCAB11-202ENST00000538485 LUZP6Q538Z0 58 aa6.31□□□□□ -1.4
EFCAB11-202ENST00000538485 LCE3BQ5TA77 95 aa6.24□□□□□ -1.41
EFCAB11-202ENST00000538485 NDUFAF8A1L188 74 aa6.1□□□□□ -1.43
EFCAB11-202ENST00000538485 KRTAP2-3P0C7H8 128 aa6.09□□□□□ -1.43
EFCAB11-202ENST00000538485 KRTAP2-4Q9BYR9 128 aa6.09□□□□□ -1.43
EFCAB11-202ENST00000538485 KRTAP5-5Q701N2 237 aaPredicted RBP6.07□□□□□ -1.44
EFCAB11-202ENST00000538485 KRTAP20-1Q3LI63 56 aa6.02□□□□□ -1.45
EFCAB11-202ENST00000538485 KRTAP2-2Q9BYT5 123 aa5.96□□□□□ -1.45
EFCAB11-202ENST00000538485 KRTAP2-1Q9BYU5 128 aa5.96□□□□□ -1.45
EFCAB11-202ENST00000538485 H3BS24 57 aa5.91□□□□□ -1.46
EFCAB11-202ENST00000538485 MT1AP04731 61 aa5.88□□□□□ -1.47
EFCAB11-202ENST00000538485 KRTAP6-1Q3LI64 71 aa5.87□□□□□ -1.47
EFCAB11-202ENST00000538485 KRTAP5-4Q6L8H1 288 aa5.85□□□□□ -1.47
EFCAB11-202ENST00000538485 SYNE1Q8NF91 8797 aaKnown RBP5.85□□□□□ -1.47
EFCAB11-202ENST00000538485 LCE4AQ5TA78 99 aa5.73□□□□□ -1.49
EFCAB11-202ENST00000538485 MT4P47944 62 aa5.66□□□□□ -1.5
EFCAB11-202ENST00000538485 KRTAP4-9Q9BYQ8 210 aa5.65□□□□□ -1.5
EFCAB11-202ENST00000538485 KRTAP12-4P60329 112 aa5.64□□□□□ -1.51
EFCAB11-202ENST00000538485 KRTAP9-4Q9BYQ2 154 aa5.62□□□□□ -1.51
EFCAB11-202ENST00000538485 HMCN1Q96RW7 5635 aa5.59□□□□□ -1.52
EFCAB11-202ENST00000538485 LCE1DQ5T752 114 aa5.58□□□□□ -1.52
EFCAB11-202ENST00000538485 KRTAP9-9Q9BYP9 154 aa5.54□□□□□ -1.52
EFCAB11-202ENST00000538485 KRTAP20-2Q3LI61 65 aa5.47□□□□□ -1.53
EFCAB11-202ENST00000538485 KRTAP6-2Q3LI66 62 aa5.43□□□□□ -1.54
EFCAB11-202ENST00000538485 KRTAP4-12Q9BQ66 201 aa5.42□□□□□ -1.54
EFCAB11-202ENST00000538485 KRTAP5-3Q6L8H2 238 aa5.37□□□□□ -1.55
EFCAB11-202ENST00000538485 MT3P25713 68 aa5.34□□□□□ -1.55
EFCAB11-202ENST00000538485 KRTAP4-2Q9BYR5 136 aa5.28□□□□□ -1.56
EFCAB11-202ENST00000538485 KRTAP5-2Q701N4 177 aa5.28□□□□□ -1.56
EFCAB11-202ENST00000538485 A0A0A0MQY5 61 aa5.26□□□□□ -1.57
EFCAB11-202ENST00000538485 OBSCNQ5VST9 7968 aa5.24□□□□□ -1.57
EFCAB11-202ENST00000538485 LCE3DQ9BYE3 92 aa5.07□□□□□ -1.6
EFCAB11-202ENST00000538485 INE1O15225 51 aa4.97□□□□□ -1.61
EFCAB11-202ENST00000538485 AHNAK2Q8IVF2 5795 aa4.93□□□□□ -1.62
EFCAB11-202ENST00000538485 LCE3EQ5T5B0 92 aa4.9□□□□□ -1.62
EFCAB11-202ENST00000538485 KRTAP4-11Q9BYQ6 195 aa4.88□□□□□ -1.63
EFCAB11-202ENST00000538485 KRTAP5-10Q6L8G5 202 aa4.7□□□□□ -1.66
EFCAB11-202ENST00000538485 LCE1EQ5T753 118 aa4.67□□□□□ -1.66
EFCAB11-202ENST00000538485 KRTAP5-8O75690 187 aa4.61□□□□□ -1.67
EFCAB11-202ENST00000538485 KRTAP5-1Q6L8H4 278 aa4.6□□□□□ -1.67
EFCAB11-202ENST00000538485 GPR98Q8WXG9 6306 aa4.56□□□□□ -1.68
EFCAB11-202ENST00000538485 MUC5ACP98088 5654 aa4.44□□□□□ -1.7
EFCAB11-202ENST00000538485 KRTAP5-7Q6L8G8 165 aa4.42□□□□□ -1.7
EFCAB11-202ENST00000538485 LCE1BQ5T7P3 118 aa4.4□□□□□ -1.71
EFCAB11-202ENST00000538485 LCE1CQ5T751 118 aa4.36□□□□□ -1.71
EFCAB11-202ENST00000538485 PRM1P04553 51 aa4.23□□□□□ -1.73
EFCAB11-202ENST00000538485 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.07□□□□□ -1.76
EFCAB11-202ENST00000538485 MUC5BQ9HC84 5762 aaPredicted RBP4.05□□□□□ -1.76
EFCAB11-202ENST00000538485 KRTAP5-11Q6L8G4 156 aa3.86□□□□□ -1.79
EFCAB11-202ENST00000538485 KRTAP21-2Q3LI59 83 aa3.85□□□□□ -1.79
EFCAB11-202ENST00000538485 AHNAKQ09666 5890 aaKnown RBP3.72□□□□□ -1.81
EFCAB11-202ENST00000538485 LCE1FQ5T754 118 aa3.5□□□□□ -1.85
EFCAB11-202ENST00000538485 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
EFCAB11-202ENST00000538485 PHGR1C9JFL3 82 aa3.32□□□□□ -1.88
EFCAB11-202ENST00000538485 MUC19Q7Z5P9 8384 aa3.12□□□□□ -1.91
EFCAB11-202ENST00000538485 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
EFCAB11-202ENST00000538485 MUC16Q8WXI7 14507 aa2.11□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 174.7 ms