RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 SPRR2GQ9BYE4 73 aa1.92□□□□□ -2.1
SNHG1-208ENST00000538266 C10orf95Q9H7T3 257 aa1.92□□□□□ -2.1
SNHG1-208ENST00000538266 KRTAP5-9P26371 169 aa1.91□□□□□ -2.1
SNHG1-208ENST00000538266 FLGP20930 4061 aaPredicted RBP1.91□□□□□ -2.1
SNHG1-208ENST00000538266 FAT4Q6V0I7 4981 aa1.91□□□□□ -2.1
SNHG1-208ENST00000538266 CRCT1Q9UGL9 99 aa1.9□□□□□ -2.11
SNHG1-208ENST00000538266 KRTAP19-8Q3LI54 63 aa1.88□□□□□ -2.11
SNHG1-208ENST00000538266 LCE3DQ9BYE3 92 aa1.88□□□□□ -2.11
SNHG1-208ENST00000538266 OBSCNQ5VST9 7968 aa1.88□□□□□ -2.11
SNHG1-208ENST00000538266 CAMK2N1Q7Z7J9 78 aa1.87□□□□□ -2.11
SNHG1-208ENST00000538266 PLAC4Q8WY50 150 aa1.87□□□□□ -2.11
SNHG1-208ENST00000538266 MT1BP07438 61 aa1.86□□□□□ -2.11
SNHG1-208ENST00000538266 KRTAP19-6Q3LI70 58 aa1.84□□□□□ -2.11
SNHG1-208ENST00000538266 KRTAP5-5Q701N2 237 aaPredicted RBP1.84□□□□□ -2.11
SNHG1-208ENST00000538266 KRTAP4-3Q9BYR4 195 aa1.84□□□□□ -2.11
SNHG1-208ENST00000538266 PRO2289Q9P1D8 64 aa1.84□□□□□ -2.11
SNHG1-208ENST00000538266 PP632Q6XCG6 107 aa1.83□□□□□ -2.12
SNHG1-208ENST00000538266 SPRR5A0A1B0GTR4 108 aa1.8□□□□□ -2.12
SNHG1-208ENST00000538266 MT1XP80297 61 aa1.78□□□□□ -2.12
SNHG1-208ENST00000538266 LUZP6Q538Z0 58 aa1.77□□□□□ -2.13
SNHG1-208ENST00000538266 LCE1CQ5T751 118 aa1.75□□□□□ -2.13
SNHG1-208ENST00000538266 LCE1BQ5T7P3 118 aa1.75□□□□□ -2.13
SNHG1-208ENST00000538266 FSIP2Q5CZC0 6907 aa1.73□□□□□ -2.13
SNHG1-208ENST00000538266 TNP1P09430 55 aa1.72□□□□□ -2.13
SNHG1-208ENST00000538266 KRTAP8-1Q8IUC2 63 aa1.69□□□□□ -2.14
SNHG1-208ENST00000538266 USH2AO75445 5202 aa1.67□□□□□ -2.14
SNHG1-208ENST00000538266 KRTAP6-3Q3LI67 103 aa1.67□□□□□ -2.14
SNHG1-208ENST00000538266 SPRR2FQ96RM1 72 aa1.65□□□□□ -2.15
SNHG1-208ENST00000538266 SSPOA2VEC9 5147 aa1.64□□□□□ -2.15
SNHG1-208ENST00000538266 FCGBPQ9Y6R7 5405 aaPredicted RBP1.64□□□□□ -2.15
SNHG1-208ENST00000538266 KRTAP5-2Q701N4 177 aa1.61□□□□□ -2.15
SNHG1-208ENST00000538266 SPRR2EP22531 72 aa1.6□□□□□ -2.15
SNHG1-208ENST00000538266 SPRR2BP35325 72 aa1.6□□□□□ -2.15
SNHG1-208ENST00000538266 SPRR2AP35326 72 aa1.6□□□□□ -2.15
SNHG1-208ENST00000538266 KRTAP19-5Q3LI72 72 aa1.59□□□□□ -2.15
SNHG1-208ENST00000538266 INE1O15225 51 aa1.57□□□□□ -2.16
SNHG1-208ENST00000538266 MT1EP04732 61 aa1.57□□□□□ -2.16
SNHG1-208ENST00000538266 KRTAP19-7Q3SYF9 63 aa1.57□□□□□ -2.16
SNHG1-208ENST00000538266 KRTAP12-3P60328 96 aa1.56□□□□□ -2.16
SNHG1-208ENST00000538266 SPRR2DP22532 72 aa1.55□□□□□ -2.16
SNHG1-208ENST00000538266 KRTAP19-3Q7Z4W3 81 aa1.54□□□□□ -2.16
SNHG1-208ENST00000538266 MACF1Q9UPN3 7388 aaKnown RBP1.54□□□□□ -2.16
SNHG1-208ENST00000538266 KRTAP20-1Q3LI63 56 aa1.52□□□□□ -2.17
SNHG1-208ENST00000538266 MT1LQ93083 61 aa1.52□□□□□ -2.17
SNHG1-208ENST00000538266 MT1GP13640 62 aa1.51□□□□□ -2.17
SNHG1-208ENST00000538266 KRTAP2-3P0C7H8 128 aa1.5□□□□□ -2.17
SNHG1-208ENST00000538266 KRTAP2-4Q9BYR9 128 aa1.5□□□□□ -2.17
SNHG1-208ENST00000538266 SYNE2Q8WXH0 6885 aaKnown RBP1.49□□□□□ -2.17
SNHG1-208ENST00000538266 MT1MQ8N339 61 aa1.48□□□□□ -2.17
SNHG1-208ENST00000538266 KMT2DO14686 5537 aa1.46□□□□□ -2.18
SNHG1-208ENST00000538266 KRTAP2-1Q9BYU5 128 aa1.46□□□□□ -2.18
SNHG1-208ENST00000538266 KRTAP5-7Q6L8G8 165 aa1.45□□□□□ -2.18
SNHG1-208ENST00000538266 NEBP20929 6669 aa1.39□□□□□ -2.19
SNHG1-208ENST00000538266 MUC19Q7Z5P9 8384 aa1.39□□□□□ -2.19
SNHG1-208ENST00000538266 KRTAP12-4P60329 112 aa1.38□□□□□ -2.19
SNHG1-208ENST00000538266 MUC12Q9UKN1 5478 aa1.38□□□□□ -2.19
SNHG1-208ENST00000538266 MDN1Q9NU22 5596 aa1.34□□□□□ -2.19
SNHG1-208ENST00000538266 MT4P47944 62 aa1.34□□□□□ -2.19
SNHG1-208ENST00000538266 KRTAP5-8O75690 187 aa1.3□□□□□ -2.2
SNHG1-208ENST00000538266 MT1AP04731 61 aa1.3□□□□□ -2.2
SNHG1-208ENST00000538266 KRTAP6-1Q3LI64 71 aa1.27□□□□□ -2.21
SNHG1-208ENST00000538266 DSTQ03001 7570 aaKnown RBP1.26□□□□□ -2.21
SNHG1-208ENST00000538266 KRTAP20-2Q3LI61 65 aa1.26□□□□□ -2.21
SNHG1-208ENST00000538266 KRTAP21-2Q3LI59 83 aa1.23□□□□□ -2.21
SNHG1-208ENST00000538266 KRTAP6-2Q3LI66 62 aa1.21□□□□□ -2.22
SNHG1-208ENST00000538266 KRTAP5-10Q6L8G5 202 aa1.17□□□□□ -2.22
SNHG1-208ENST00000538266 HMCN1Q96RW7 5635 aa1.11□□□□□ -2.23
SNHG1-208ENST00000538266 PRM1P04553 51 aa1.08□□□□□ -2.24
SNHG1-208ENST00000538266 SYNE1Q8NF91 8797 aaKnown RBP1.08□□□□□ -2.24
SNHG1-208ENST00000538266 GPR98Q8WXG9 6306 aa1□□□□□ -2.25
SNHG1-208ENST00000538266 AHNAK2Q8IVF2 5795 aa1□□□□□ -2.25
SNHG1-208ENST00000538266 MUC5ACP98088 5654 aa0.86□□□□□ -2.27
SNHG1-208ENST00000538266 MUC5BQ9HC84 5762 aaPredicted RBP0.77□□□□□ -2.29
SNHG1-208ENST00000538266 AHNAKQ09666 5890 aaKnown RBP0.76□□□□□ -2.29
SNHG1-208ENST00000538266 PHGR1C9JFL3 82 aa0.76□□□□□ -2.29
SNHG1-208ENST00000538266 KRTAP21-1Q3LI58 79 aa0.69□□□□□ -2.3
SNHG1-208ENST00000538266 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 13.8 ms