RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 KRTAP8-1Q8IUC2 63 aa4.7□□□□□ -1.66
DDB1-209ENST00000537877 KRTAP4-11Q9BYQ6 195 aa4.64□□□□□ -1.67
DDB1-209ENST00000537877 KRTAP15-1Q3LI76 137 aa4.62□□□□□ -1.67
DDB1-209ENST00000537877 KRTAP19-5Q3LI72 72 aa4.61□□□□□ -1.67
DDB1-209ENST00000537877 KRTAP12-3P60328 96 aa4.6□□□□□ -1.67
DDB1-209ENST00000537877 KRTAP19-7Q3SYF9 63 aa4.58□□□□□ -1.68
DDB1-209ENST00000537877 KMT2DO14686 5537 aa4.58□□□□□ -1.68
DDB1-209ENST00000537877 KRTAP4-2Q9BYR5 136 aa4.55□□□□□ -1.68
DDB1-209ENST00000537877 MT1EP04732 61 aa4.52□□□□□ -1.69
DDB1-209ENST00000537877 KRTAP5-9P26371 169 aa4.52□□□□□ -1.69
DDB1-209ENST00000537877 SPRR2FQ96RM1 72 aa4.51□□□□□ -1.69
DDB1-209ENST00000537877 MACF1Q9UPN3 7388 aaKnown RBP4.5□□□□□ -1.69
DDB1-209ENST00000537877 KRTAP6-3Q3LI67 103 aa4.49□□□□□ -1.69
DDB1-209ENST00000537877 NDUFAF8A1L188 74 aa4.44□□□□□ -1.7
DDB1-209ENST00000537877 MT1LQ93083 61 aa4.41□□□□□ -1.7
DDB1-209ENST00000537877 KRTAP19-3Q7Z4W3 81 aa4.38□□□□□ -1.71
DDB1-209ENST00000537877 MT1GP13640 62 aa4.33□□□□□ -1.72
DDB1-209ENST00000537877 LCE1AQ5T7P2 110 aa4.33□□□□□ -1.72
DDB1-209ENST00000537877 SPRR2EP22531 72 aa4.31□□□□□ -1.72
DDB1-209ENST00000537877 SPRR2BP35325 72 aa4.31□□□□□ -1.72
DDB1-209ENST00000537877 SPRR2AP35326 72 aa4.31□□□□□ -1.72
DDB1-209ENST00000537877 SYNE2Q8WXH0 6885 aaKnown RBP4.3□□□□□ -1.72
DDB1-209ENST00000537877 MUC12Q9UKN1 5478 aa4.29□□□□□ -1.72
DDB1-209ENST00000537877 LCE3CQ5T5A8 94 aa4.28□□□□□ -1.72
DDB1-209ENST00000537877 MT1MQ8N339 61 aa4.27□□□□□ -1.73
DDB1-209ENST00000537877 SPRR5A0A1B0GTR4 108 aa4.2□□□□□ -1.74
DDB1-209ENST00000537877 MDN1Q9NU22 5596 aa4.18□□□□□ -1.74
DDB1-209ENST00000537877 SPRR2DP22532 72 aa4.15□□□□□ -1.74
DDB1-209ENST00000537877 KRTAP4-3Q9BYR4 195 aa4.12□□□□□ -1.75
DDB1-209ENST00000537877 LUZP6Q538Z0 58 aa4.09□□□□□ -1.75
DDB1-209ENST00000537877 A0A0A0MQY5 61 aa4.05□□□□□ -1.76
DDB1-209ENST00000537877 KRTAP9-6A8MVA2 160 aa4.02□□□□□ -1.77
DDB1-209ENST00000537877 NEBP20929 6669 aa4.02□□□□□ -1.77
DDB1-209ENST00000537877 GPR98Q8WXG9 6306 aa3.96□□□□□ -1.78
DDB1-209ENST00000537877 KRTAP2-3P0C7H8 128 aa3.94□□□□□ -1.78
DDB1-209ENST00000537877 KRTAP2-4Q9BYR9 128 aa3.94□□□□□ -1.78
DDB1-209ENST00000537877 KRTAP20-1Q3LI63 56 aa3.89□□□□□ -1.79
DDB1-209ENST00000537877 DSTQ03001 7570 aaKnown RBP3.88□□□□□ -1.79
DDB1-209ENST00000537877 KRTAP5-3Q6L8H2 238 aa3.86□□□□□ -1.79
DDB1-209ENST00000537877 KRTAP5-5Q701N2 237 aaPredicted RBP3.86□□□□□ -1.79
DDB1-209ENST00000537877 KRTAP2-2Q9BYT5 123 aa3.85□□□□□ -1.79
DDB1-209ENST00000537877 KRTAP2-1Q9BYU5 128 aa3.85□□□□□ -1.79
DDB1-209ENST00000537877 MT1AP04731 61 aa3.77□□□□□ -1.81
DDB1-209ENST00000537877 MT3P25713 68 aa3.77□□□□□ -1.81
DDB1-209ENST00000537877 INE1O15225 51 aa3.75□□□□□ -1.81
DDB1-209ENST00000537877 KRTAP5-4Q6L8H1 288 aa3.75□□□□□ -1.81
DDB1-209ENST00000537877 KRTAP6-1Q3LI64 71 aa3.7□□□□□ -1.82
DDB1-209ENST00000537877 KRTAP12-4P60329 112 aa3.63□□□□□ -1.83
DDB1-209ENST00000537877 MT4P47944 62 aa3.58□□□□□ -1.84
DDB1-209ENST00000537877 SYNE1Q8NF91 8797 aaKnown RBP3.54□□□□□ -1.84
DDB1-209ENST00000537877 KRTAP20-2Q3LI61 65 aa3.51□□□□□ -1.85
DDB1-209ENST00000537877 KRTAP6-2Q3LI66 62 aa3.42□□□□□ -1.86
DDB1-209ENST00000537877 HMCN1Q96RW7 5635 aa3.42□□□□□ -1.86
DDB1-209ENST00000537877 KRTAP5-2Q701N4 177 aa3.38□□□□□ -1.87
DDB1-209ENST00000537877 AHNAK2Q8IVF2 5795 aa3.3□□□□□ -1.88
DDB1-209ENST00000537877 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
DDB1-209ENST00000537877 LCE3DQ9BYE3 92 aa3.21□□□□□ -1.9
DDB1-209ENST00000537877 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
DDB1-209ENST00000537877 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
DDB1-209ENST00000537877 AHNAKQ09666 5890 aaKnown RBP3.06□□□□□ -1.92
DDB1-209ENST00000537877 KRTAP5-11Q6L8G4 156 aa3.06□□□□□ -1.92
DDB1-209ENST00000537877 KRTAP5-10Q6L8G5 202 aa3.02□□□□□ -1.93
DDB1-209ENST00000537877 OBSCNQ5VST9 7968 aa3.01□□□□□ -1.93
DDB1-209ENST00000537877 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.98□□□□□ -1.93
DDB1-209ENST00000537877 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
DDB1-209ENST00000537877 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
DDB1-209ENST00000537877 KRTAP5-1Q6L8H4 278 aa2.92□□□□□ -1.94
DDB1-209ENST00000537877 KRTAP5-7Q6L8G8 165 aa2.9□□□□□ -1.94
DDB1-209ENST00000537877 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
DDB1-209ENST00000537877 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
DDB1-209ENST00000537877 MUC5ACP98088 5654 aa2.76□□□□□ -1.97
DDB1-209ENST00000537877 PRM1P04553 51 aa2.63□□□□□ -1.99
DDB1-209ENST00000537877 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
DDB1-209ENST00000537877 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
DDB1-209ENST00000537877 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
DDB1-209ENST00000537877 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.12
DDB1-209ENST00000537877 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
DDB1-209ENST00000537877 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 94 ms