RNA–Protein interactions for RNA: ENST00000537856.7

TCF4-206, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-206ENST00000537856 KRTAP5-3Q6L8H2 238 aa4.63□□□□□ -1.67
TCF4-206ENST00000537856 KRTAP6-3Q3LI67 103 aa4.62□□□□□ -1.67
TCF4-206ENST00000537856 SPRR5A0A1B0GTR4 108 aa4.56□□□□□ -1.68
TCF4-206ENST00000537856 MACF1Q9UPN3 7388 aaKnown RBP4.55□□□□□ -1.68
TCF4-206ENST00000537856 INE1O15225 51 aa4.48□□□□□ -1.69
TCF4-206ENST00000537856 SYNE2Q8WXH0 6885 aaKnown RBP4.47□□□□□ -1.69
TCF4-206ENST00000537856 MT1XP80297 61 aa4.4□□□□□ -1.7
TCF4-206ENST00000537856 KRTAP5-9P26371 169 aa4.39□□□□□ -1.71
TCF4-206ENST00000537856 KRTAP8-1Q8IUC2 63 aa4.33□□□□□ -1.72
TCF4-206ENST00000537856 TNP1P09430 55 aa4.29□□□□□ -1.72
TCF4-206ENST00000537856 SPRR2FQ96RM1 72 aa4.29□□□□□ -1.72
TCF4-206ENST00000537856 NEBP20929 6669 aa4.26□□□□□ -1.73
TCF4-206ENST00000537856 KRTAP20-1Q3LI63 56 aa4.25□□□□□ -1.73
TCF4-206ENST00000537856 KRTAP10-12P60413 245 aa4.23□□□□□ -1.73
TCF4-206ENST00000537856 SPRR2EP22531 72 aa4.22□□□□□ -1.73
TCF4-206ENST00000537856 SPRR2BP35325 72 aa4.22□□□□□ -1.73
TCF4-206ENST00000537856 SPRR2AP35326 72 aa4.22□□□□□ -1.73
TCF4-206ENST00000537856 KRTAP10-7P60409 375 aaPredicted RBP4.19□□□□□ -1.74
TCF4-206ENST00000537856 KRTAP2-3P0C7H8 128 aa4.18□□□□□ -1.74
TCF4-206ENST00000537856 KRTAP2-4Q9BYR9 128 aa4.18□□□□□ -1.74
TCF4-206ENST00000537856 MUC12Q9UKN1 5478 aa4.17□□□□□ -1.74
TCF4-206ENST00000537856 KMT2DO14686 5537 aa4.15□□□□□ -1.75
TCF4-206ENST00000537856 LCE1AQ5T7P2 110 aa4.13□□□□□ -1.75
TCF4-206ENST00000537856 SPRR2DP22532 72 aa4.09□□□□□ -1.75
TCF4-206ENST00000537856 MDN1Q9NU22 5596 aa4.06□□□□□ -1.76
TCF4-206ENST00000537856 KRTAP2-2Q9BYT5 123 aa4.05□□□□□ -1.76
TCF4-206ENST00000537856 KRTAP2-1Q9BYU5 128 aa4.05□□□□□ -1.76
TCF4-206ENST00000537856 LCE3AQ5TA76 89 aa3.93□□□□□ -1.78
TCF4-206ENST00000537856 MT1EP04732 61 aa3.93□□□□□ -1.78
TCF4-206ENST00000537856 KRTAP19-7Q3SYF9 63 aa3.93□□□□□ -1.78
TCF4-206ENST00000537856 KRTAP19-3Q7Z4W3 81 aa3.92□□□□□ -1.78
TCF4-206ENST00000537856 MT1GP13640 62 aa3.87□□□□□ -1.79
TCF4-206ENST00000537856 KRTAP19-5Q3LI72 72 aa3.87□□□□□ -1.79
TCF4-206ENST00000537856 MT1LQ93083 61 aa3.76□□□□□ -1.81
TCF4-206ENST00000537856 KRTAP12-3P60328 96 aa3.75□□□□□ -1.81
TCF4-206ENST00000537856 MT1MQ8N339 61 aa3.73□□□□□ -1.81
TCF4-206ENST00000537856 DSTQ03001 7570 aaKnown RBP3.59□□□□□ -1.84
TCF4-206ENST00000537856 LCE3CQ5T5A8 94 aa3.58□□□□□ -1.84
TCF4-206ENST00000537856 KRTAP4-3Q9BYR4 195 aa3.54□□□□□ -1.84
TCF4-206ENST00000537856 MT4P47944 62 aa3.52□□□□□ -1.85
TCF4-206ENST00000537856 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
TCF4-206ENST00000537856 KRTAP12-4P60329 112 aa3.43□□□□□ -1.86
TCF4-206ENST00000537856 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.43□□□□□ -1.86
TCF4-206ENST00000537856 KRTAP9-6A8MVA2 160 aa3.42□□□□□ -1.86
TCF4-206ENST00000537856 KRTAP5-5Q701N2 237 aaPredicted RBP3.39□□□□□ -1.87
TCF4-206ENST00000537856 HMCN1Q96RW7 5635 aa3.37□□□□□ -1.87
TCF4-206ENST00000537856 GPR98Q8WXG9 6306 aa3.36□□□□□ -1.87
TCF4-206ENST00000537856 KRTAP20-2Q3LI61 65 aa3.32□□□□□ -1.88
TCF4-206ENST00000537856 KRTAP5-11Q6L8G4 156 aa3.3□□□□□ -1.88
TCF4-206ENST00000537856 KRTAP5-10Q6L8G5 202 aa3.25□□□□□ -1.89
TCF4-206ENST00000537856 MT1AP04731 61 aa3.24□□□□□ -1.89
TCF4-206ENST00000537856 AHNAK2Q8IVF2 5795 aa3.23□□□□□ -1.89
TCF4-206ENST00000537856 MT3P25713 68 aa3.21□□□□□ -1.89
TCF4-206ENST00000537856 KRTAP5-7Q6L8G8 165 aa3.16□□□□□ -1.9
TCF4-206ENST00000537856 KRTAP6-1Q3LI64 71 aa3.14□□□□□ -1.91
TCF4-206ENST00000537856 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
TCF4-206ENST00000537856 SYNE1Q8NF91 8797 aaKnown RBP3.1□□□□□ -1.91
TCF4-206ENST00000537856 KRTAP5-2Q701N4 177 aa3.09□□□□□ -1.91
TCF4-206ENST00000537856 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
TCF4-206ENST00000537856 KRTAP6-2Q3LI66 62 aa3.01□□□□□ -1.93
TCF4-206ENST00000537856 KRTAP5-1Q6L8H4 278 aa2.96□□□□□ -1.94
TCF4-206ENST00000537856 PRM1P04553 51 aa2.9□□□□□ -1.95
TCF4-206ENST00000537856 KRTAP5-8O75690 187 aa2.89□□□□□ -1.95
TCF4-206ENST00000537856 LCE3EQ5T5B0 92 aa2.86□□□□□ -1.95
TCF4-206ENST00000537856 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
TCF4-206ENST00000537856 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
TCF4-206ENST00000537856 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
TCF4-206ENST00000537856 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
TCF4-206ENST00000537856 OBSCNQ5VST9 7968 aa2.64□□□□□ -1.99
TCF4-206ENST00000537856 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
TCF4-206ENST00000537856 LCE1CQ5T751 118 aa2.53□□□□□ -2
TCF4-206ENST00000537856 LCE1BQ5T7P3 118 aa2.53□□□□□ -2
TCF4-206ENST00000537856 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
TCF4-206ENST00000537856 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
TCF4-206ENST00000537856 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
TCF4-206ENST00000537856 MUC19Q7Z5P9 8384 aa1.62□□□□□ -2.15
TCF4-206ENST00000537856 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 35.6 ms