RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
SRGAP1-202ENST00000537556 KRTAP4-12Q9BQ66 201 aa3□□□□□ -1.93
SRGAP1-202ENST00000537556 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
SRGAP1-202ENST00000537556 KRTAP19-5Q3LI72 72 aa2.97□□□□□ -1.93
SRGAP1-202ENST00000537556 MT1BP07438 61 aa2.93□□□□□ -1.94
SRGAP1-202ENST00000537556 CRCT1Q9UGL9 99 aa2.93□□□□□ -1.94
SRGAP1-202ENST00000537556 MT1FP04733 61 aa2.91□□□□□ -1.94
SRGAP1-202ENST00000537556 KRTAP12-4P60329 112 aa2.91□□□□□ -1.94
SRGAP1-202ENST00000537556 KRTAP19-4Q3LI73 84 aa2.91□□□□□ -1.94
SRGAP1-202ENST00000537556 MT2AP02795 61 aa2.9□□□□□ -1.94
SRGAP1-202ENST00000537556 KRTAP9-3Q9BYQ3 159 aa2.78□□□□□ -1.96
SRGAP1-202ENST00000537556 KRTAP4-11Q9BYQ6 195 aa2.77□□□□□ -1.97
SRGAP1-202ENST00000537556 FSIP2Q5CZC0 6907 aa2.76□□□□□ -1.97
SRGAP1-202ENST00000537556 USH2AO75445 5202 aa2.73□□□□□ -1.97
SRGAP1-202ENST00000537556 KRTAP19-6Q3LI70 58 aa2.72□□□□□ -1.97
SRGAP1-202ENST00000537556 KRTAP2-2Q9BYT5 123 aa2.71□□□□□ -1.98
SRGAP1-202ENST00000537556 KRTAP19-7Q3SYF9 63 aa2.7□□□□□ -1.98
SRGAP1-202ENST00000537556 SSPOA2VEC9 5147 aa2.7□□□□□ -1.98
SRGAP1-202ENST00000537556 KRTAP9-7A8MTY7 169 aa2.69□□□□□ -1.98
SRGAP1-202ENST00000537556 MT1LQ93083 61 aa2.67□□□□□ -1.98
SRGAP1-202ENST00000537556 KRTAP6-3Q3LI67 103 aa2.67□□□□□ -1.98
SRGAP1-202ENST00000537556 FCGBPQ9Y6R7 5405 aaPredicted RBP2.66□□□□□ -1.98
SRGAP1-202ENST00000537556 KMT2DO14686 5537 aa2.64□□□□□ -1.99
SRGAP1-202ENST00000537556 MT1EP04732 61 aa2.64□□□□□ -1.99
SRGAP1-202ENST00000537556 PRM1P04553 51 aa2.61□□□□□ -1.99
SRGAP1-202ENST00000537556 LCE1AQ5T7P2 110 aa2.61□□□□□ -1.99
SRGAP1-202ENST00000537556 MACF1Q9UPN3 7388 aaKnown RBP2.56□□□□□ -2
SRGAP1-202ENST00000537556 MT1AP04731 61 aa2.55□□□□□ -2
SRGAP1-202ENST00000537556 MT1GP13640 62 aa2.54□□□□□ -2
SRGAP1-202ENST00000537556 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
SRGAP1-202ENST00000537556 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
SRGAP1-202ENST00000537556 GPR98Q8WXG9 6306 aa2.52□□□□□ -2.01
SRGAP1-202ENST00000537556 SYNE1Q8NF91 8797 aaKnown RBP2.51□□□□□ -2.01
SRGAP1-202ENST00000537556 KRTAP5-5Q701N2 237 aaPredicted RBP2.51□□□□□ -2.01
SRGAP1-202ENST00000537556 SYNE2Q8WXH0 6885 aaKnown RBP2.5□□□□□ -2.01
SRGAP1-202ENST00000537556 KRTAP5-9P26371 169 aa2.49□□□□□ -2.01
SRGAP1-202ENST00000537556 KRTAP4-3Q9BYR4 195 aa2.45□□□□□ -2.02
SRGAP1-202ENST00000537556 NEBP20929 6669 aa2.44□□□□□ -2.02
SRGAP1-202ENST00000537556 LCE1EQ5T753 118 aa2.43□□□□□ -2.02
SRGAP1-202ENST00000537556 MT1MQ8N339 61 aa2.4□□□□□ -2.03
SRGAP1-202ENST00000537556 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.38□□□□□ -2.03
SRGAP1-202ENST00000537556 KRTAP20-1Q3LI63 56 aa2.37□□□□□ -2.03
SRGAP1-202ENST00000537556 LCE5AQ5TCM9 118 aa2.37□□□□□ -2.03
SRGAP1-202ENST00000537556 KRTAP6-2Q3LI66 62 aa2.37□□□□□ -2.03
SRGAP1-202ENST00000537556 MUC12Q9UKN1 5478 aa2.35□□□□□ -2.03
SRGAP1-202ENST00000537556 KRTAP19-3Q7Z4W3 81 aa2.34□□□□□ -2.03
SRGAP1-202ENST00000537556 SPRR2FQ96RM1 72 aa2.31□□□□□ -2.04
SRGAP1-202ENST00000537556 MDN1Q9NU22 5596 aa2.3□□□□□ -2.04
SRGAP1-202ENST00000537556 SPRR2EP22531 72 aa2.29□□□□□ -2.04
SRGAP1-202ENST00000537556 SPRR2BP35325 72 aa2.29□□□□□ -2.04
SRGAP1-202ENST00000537556 SPRR2AP35326 72 aa2.29□□□□□ -2.04
SRGAP1-202ENST00000537556 OBSCNQ5VST9 7968 aa2.26□□□□□ -2.05
SRGAP1-202ENST00000537556 KRTAP6-1Q3LI64 71 aa2.26□□□□□ -2.05
SRGAP1-202ENST00000537556 DSTQ03001 7570 aaKnown RBP2.22□□□□□ -2.05
SRGAP1-202ENST00000537556 SPRR2DP22532 72 aa2.22□□□□□ -2.05
SRGAP1-202ENST00000537556 LCE4AQ5TA78 99 aa2.13□□□□□ -2.07
SRGAP1-202ENST00000537556 LCE1FQ5T754 118 aa2.12□□□□□ -2.07
SRGAP1-202ENST00000537556 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
SRGAP1-202ENST00000537556 KRTAP5-4Q6L8H1 288 aa2.04□□□□□ -2.08
SRGAP1-202ENST00000537556 MT3P25713 68 aa2.02□□□□□ -2.09
SRGAP1-202ENST00000537556 KRTAP5-7Q6L8G8 165 aa1.96□□□□□ -2.1
SRGAP1-202ENST00000537556 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
SRGAP1-202ENST00000537556 MT4P47944 62 aa1.89□□□□□ -2.11
SRGAP1-202ENST00000537556 KRTAP5-10Q6L8G5 202 aa1.88□□□□□ -2.11
SRGAP1-202ENST00000537556 AHNAK2Q8IVF2 5795 aa1.87□□□□□ -2.11
SRGAP1-202ENST00000537556 KRTAP5-2Q701N4 177 aa1.86□□□□□ -2.11
SRGAP1-202ENST00000537556 KRTAP5-8O75690 187 aa1.84□□□□□ -2.11
SRGAP1-202ENST00000537556 KRTAP20-2Q3LI61 65 aa1.84□□□□□ -2.11
SRGAP1-202ENST00000537556 KRTAP5-11Q6L8G4 156 aa1.78□□□□□ -2.12
SRGAP1-202ENST00000537556 KRTAP5-1Q6L8H4 278 aa1.77□□□□□ -2.13
SRGAP1-202ENST00000537556 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
SRGAP1-202ENST00000537556 MUC5ACP98088 5654 aa1.72□□□□□ -2.13
SRGAP1-202ENST00000537556 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
SRGAP1-202ENST00000537556 LCE1CQ5T751 118 aa1.65□□□□□ -2.15
SRGAP1-202ENST00000537556 LCE1BQ5T7P3 118 aa1.65□□□□□ -2.15
SRGAP1-202ENST00000537556 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
SRGAP1-202ENST00000537556 PHGR1C9JFL3 82 aa1.09□□□□□ -2.24
SRGAP1-202ENST00000537556 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 186.9 ms