RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 PMAIP1Q13794 54 aa6.71□□□□□ -1.34
CCDC61-201ENST00000536603 KRTAP4-9Q9BYQ8 210 aa6.71□□□□□ -1.34
CCDC61-201ENST00000536603 TNP1P09430 55 aa6.7□□□□□ -1.34
CCDC61-201ENST00000536603 MT1EP04732 61 aa6.66□□□□□ -1.34
CCDC61-201ENST00000536603 ROMO1P60602 79 aa6.63□□□□□ -1.35
CCDC61-201ENST00000536603 KRTAP19-5Q3LI72 72 aa6.63□□□□□ -1.35
CCDC61-201ENST00000536603 KRTAP25-1Q3LHN0 102 aa6.59□□□□□ -1.35
CCDC61-201ENST00000536603 LCE3AQ5TA76 89 aa6.59□□□□□ -1.35
CCDC61-201ENST00000536603 LCE5AQ5TCM9 118 aa6.57□□□□□ -1.36
CCDC61-201ENST00000536603 KRTAP19-3Q7Z4W3 81 aa6.55□□□□□ -1.36
CCDC61-201ENST00000536603 LCE1DQ5T752 114 aa6.48□□□□□ -1.37
CCDC61-201ENST00000536603 MT1GP13640 62 aa6.43□□□□□ -1.38
CCDC61-201ENST00000536603 KTN1-AS1Q86SY8 53 aa6.41□□□□□ -1.38
CCDC61-201ENST00000536603 MT4P47944 62 aa6.4□□□□□ -1.38
CCDC61-201ENST00000536603 MT1LQ93083 61 aa6.4□□□□□ -1.38
CCDC61-201ENST00000536603 PP632Q6XCG6 107 aa6.37□□□□□ -1.39
CCDC61-201ENST00000536603 KRTAP23-1A1A580 65 aa6.36□□□□□ -1.39
CCDC61-201ENST00000536603 LCE4AQ5TA78 99 aa6.36□□□□□ -1.39
CCDC61-201ENST00000536603 KRTAP12-3P60328 96 aa6.33□□□□□ -1.4
CCDC61-201ENST00000536603 MT1MQ8N339 61 aa6.32□□□□□ -1.4
CCDC61-201ENST00000536603 HMCN1Q96RW7 5635 aa6.29□□□□□ -1.4
CCDC61-201ENST00000536603 AHNAK2Q8IVF2 5795 aa6.21□□□□□ -1.41
CCDC61-201ENST00000536603 PRAC1Q96KF2 57 aa6.19□□□□□ -1.42
CCDC61-201ENST00000536603 KRTAP4-3Q9BYR4 195 aa6.19□□□□□ -1.42
CCDC61-201ENST00000536603 KRTAP5-10Q6L8G5 202 aa6.18□□□□□ -1.42
CCDC61-201ENST00000536603 KRTAP4-6Q9BYQ5 205 aa6.12□□□□□ -1.43
CCDC61-201ENST00000536603 KRTAP4-7Q9BYR0 210 aa6.12□□□□□ -1.43
CCDC61-201ENST00000536603 KRTAP5-4Q6L8H1 288 aa6.11□□□□□ -1.43
CCDC61-201ENST00000536603 SVIPQ8NHG7 77 aa6.1□□□□□ -1.43
CCDC61-201ENST00000536603 KRTAP15-1Q3LI76 137 aa6.06□□□□□ -1.44
CCDC61-201ENST00000536603 KRTAP5-7Q6L8G8 165 aa6□□□□□ -1.45
CCDC61-201ENST00000536603 KRTAP5-3Q6L8H2 238 aa5.97□□□□□ -1.45
CCDC61-201ENST00000536603 KRTAP19-4Q3LI73 84 aa5.95□□□□□ -1.46
CCDC61-201ENST00000536603 LCE3CQ5T5A8 94 aa5.86□□□□□ -1.47
CCDC61-201ENST00000536603 SPRR5A0A1B0GTR4 108 aa5.85□□□□□ -1.47
CCDC61-201ENST00000536603 KRTAP20-2Q3LI61 65 aa5.83□□□□□ -1.48
CCDC61-201ENST00000536603 LOC100996750A0A140TA64 210 aa5.79□□□□□ -1.48
CCDC61-201ENST00000536603 KRTAP5-5Q701N2 237 aaPredicted RBP5.76□□□□□ -1.49
CCDC61-201ENST00000536603 KRTAP12-4P60329 112 aa5.73□□□□□ -1.49
CCDC61-201ENST00000536603 KRTAP9-6A8MVA2 160 aa5.61□□□□□ -1.51
CCDC61-201ENST00000536603 SYNE1Q8NF91 8797 aaKnown RBP5.57□□□□□ -1.52
CCDC61-201ENST00000536603 MT1AP04731 61 aa5.44□□□□□ -1.54
CCDC61-201ENST00000536603 KRTAP4-11Q9BYQ6 195 aa5.43□□□□□ -1.54
CCDC61-201ENST00000536603 KRTAP6-1Q3LI64 71 aa5.41□□□□□ -1.54
CCDC61-201ENST00000536603 LUZP6Q538Z0 58 aa5.31□□□□□ -1.56
CCDC61-201ENST00000536603 KRTAP5-2Q701N4 177 aa5.27□□□□□ -1.57
CCDC61-201ENST00000536603 KRTAP9-4Q9BYQ2 154 aa5.25□□□□□ -1.57
CCDC61-201ENST00000536603 KRTAP5-8O75690 187 aa5.24□□□□□ -1.57
CCDC61-201ENST00000536603 AHNAKQ09666 5890 aaKnown RBP5.22□□□□□ -1.57
CCDC61-201ENST00000536603 MUC5ACP98088 5654 aa5.19□□□□□ -1.58
CCDC61-201ENST00000536603 KRTAP6-2Q3LI66 62 aa5.13□□□□□ -1.59
CCDC61-201ENST00000536603 MUC5BQ9HC84 5762 aaPredicted RBP5.13□□□□□ -1.59
CCDC61-201ENST00000536603 KRTAP9-9Q9BYP9 154 aa5.1□□□□□ -1.59
CCDC61-201ENST00000536603 OBSCNQ5VST9 7968 aa5.07□□□□□ -1.6
CCDC61-201ENST00000536603 MT3P25713 68 aa4.97□□□□□ -1.61
CCDC61-201ENST00000536603 NDUFAF8A1L188 74 aa4.9□□□□□ -1.63
CCDC61-201ENST00000536603 KRTAP5-1Q6L8H4 278 aa4.81□□□□□ -1.64
CCDC61-201ENST00000536603 LCE1EQ5T753 118 aa4.5□□□□□ -1.69
CCDC61-201ENST00000536603 A0A0A0MQY5 61 aa4.43□□□□□ -1.7
CCDC61-201ENST00000536603 LCE1BQ5T7P3 118 aa4.33□□□□□ -1.72
CCDC61-201ENST00000536603 LCE3DQ9BYE3 92 aa4.31□□□□□ -1.72
CCDC61-201ENST00000536603 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
CCDC61-201ENST00000536603 LCE1CQ5T751 118 aa4.18□□□□□ -1.74
CCDC61-201ENST00000536603 INE1O15225 51 aa4.16□□□□□ -1.74
CCDC61-201ENST00000536603 LCE3EQ5T5B0 92 aa4.14□□□□□ -1.75
CCDC61-201ENST00000536603 KRTAP4-12Q9BQ66 201 aa4.08□□□□□ -1.76
CCDC61-201ENST00000536603 H3BS24 57 aa4.03□□□□□ -1.76
CCDC61-201ENST00000536603 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.82□□□□□ -1.8
CCDC61-201ENST00000536603 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
CCDC61-201ENST00000536603 KRTAP5-11Q6L8G4 156 aa3.79□□□□□ -1.8
CCDC61-201ENST00000536603 PHGR1C9JFL3 82 aa3.68□□□□□ -1.82
CCDC61-201ENST00000536603 KRTAP21-2Q3LI59 83 aa3.56□□□□□ -1.84
CCDC61-201ENST00000536603 PRM1P04553 51 aa3.45□□□□□ -1.86
CCDC61-201ENST00000536603 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
CCDC61-201ENST00000536603 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
CCDC61-201ENST00000536603 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.96
CCDC61-201ENST00000536603 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 95.7 ms