RNA–Protein interactions for RNA: ENST00000536066.1

FOXM1-206, Transcript of forkhead box M1, humanhuman

TSL 1 (best)

Gene FOXM1, Length 2,518 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXM1-206ENST00000536066 KRTAP10-5P60370 271 aa3.59□□□□□ -1.83
FOXM1-206ENST00000536066 FSIP2Q5CZC0 6907 aa3.52□□□□□ -1.85
FOXM1-206ENST00000536066 USH2AO75445 5202 aa3.51□□□□□ -1.85
FOXM1-206ENST00000536066 KRTAP8-1Q8IUC2 63 aa3.51□□□□□ -1.85
FOXM1-206ENST00000536066 KRTAP10-12P60413 245 aa3.48□□□□□ -1.85
FOXM1-206ENST00000536066 MT3P25713 68 aa3.47□□□□□ -1.85
FOXM1-206ENST00000536066 KRTAP10-7P60409 375 aaPredicted RBP3.45□□□□□ -1.86
FOXM1-206ENST00000536066 KRTAP12-3P60328 96 aa3.42□□□□□ -1.86
FOXM1-206ENST00000536066 SSPOA2VEC9 5147 aa3.41□□□□□ -1.86
FOXM1-206ENST00000536066 KRTAP5-3Q6L8H2 238 aa3.36□□□□□ -1.87
FOXM1-206ENST00000536066 KRTAP2-2Q9BYT5 123 aa3.34□□□□□ -1.88
FOXM1-206ENST00000536066 KMT2DO14686 5537 aa3.31□□□□□ -1.88
FOXM1-206ENST00000536066 KRTAP19-5Q3LI72 72 aa3.29□□□□□ -1.88
FOXM1-206ENST00000536066 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
FOXM1-206ENST00000536066 FCGBPQ9Y6R7 5405 aaPredicted RBP3.26□□□□□ -1.89
FOXM1-206ENST00000536066 KRTAP19-6Q3LI70 58 aa3.25□□□□□ -1.89
FOXM1-206ENST00000536066 LCE3CQ5T5A8 94 aa3.25□□□□□ -1.89
FOXM1-206ENST00000536066 CRCT1Q9UGL9 99 aa3.24□□□□□ -1.89
FOXM1-206ENST00000536066 KRTAP19-7Q3SYF9 63 aa3.21□□□□□ -1.9
FOXM1-206ENST00000536066 KRTAP2-3P0C7H8 128 aa3.2□□□□□ -1.9
FOXM1-206ENST00000536066 KRTAP2-4Q9BYR9 128 aa3.2□□□□□ -1.9
FOXM1-206ENST00000536066 KRTAP2-1Q9BYU5 128 aa3.2□□□□□ -1.9
FOXM1-206ENST00000536066 KRTAP9-6A8MVA2 160 aa3.17□□□□□ -1.9
FOXM1-206ENST00000536066 MACF1Q9UPN3 7388 aaKnown RBP3.14□□□□□ -1.91
FOXM1-206ENST00000536066 MT1EP04732 61 aa3.14□□□□□ -1.91
FOXM1-206ENST00000536066 MT1LQ93083 61 aa3.11□□□□□ -1.91
FOXM1-206ENST00000536066 SYNE2Q8WXH0 6885 aaKnown RBP3.07□□□□□ -1.92
FOXM1-206ENST00000536066 LCE1EQ5T753 118 aa2.97□□□□□ -1.93
FOXM1-206ENST00000536066 MUC12Q9UKN1 5478 aa2.97□□□□□ -1.93
FOXM1-206ENST00000536066 KRTAP6-3Q3LI67 103 aa2.96□□□□□ -1.93
FOXM1-206ENST00000536066 KRTAP19-3Q7Z4W3 81 aa2.96□□□□□ -1.94
FOXM1-206ENST00000536066 MT1GP13640 62 aa2.94□□□□□ -1.94
FOXM1-206ENST00000536066 KRTAP12-4P60329 112 aa2.94□□□□□ -1.94
FOXM1-206ENST00000536066 MT1MQ8N339 61 aa2.93□□□□□ -1.94
FOXM1-206ENST00000536066 MDN1Q9NU22 5596 aa2.92□□□□□ -1.94
FOXM1-206ENST00000536066 SPRR2FQ96RM1 72 aa2.91□□□□□ -1.94
FOXM1-206ENST00000536066 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
FOXM1-206ENST00000536066 KRTAP5-9P26371 169 aa2.88□□□□□ -1.95
FOXM1-206ENST00000536066 KRTAP4-3Q9BYR4 195 aa2.88□□□□□ -1.95
FOXM1-206ENST00000536066 DSTQ03001 7570 aaKnown RBP2.79□□□□□ -1.96
FOXM1-206ENST00000536066 HMCN1Q96RW7 5635 aa2.78□□□□□ -1.96
FOXM1-206ENST00000536066 SPRR2EP22531 72 aa2.78□□□□□ -1.96
FOXM1-206ENST00000536066 SPRR2BP35325 72 aa2.78□□□□□ -1.96
FOXM1-206ENST00000536066 SPRR2AP35326 72 aa2.78□□□□□ -1.96
FOXM1-206ENST00000536066 NEBP20929 6669 aa2.73□□□□□ -1.97
FOXM1-206ENST00000536066 KRTAP5-11Q6L8G4 156 aa2.72□□□□□ -1.97
FOXM1-206ENST00000536066 SPRR2DP22532 72 aa2.67□□□□□ -1.98
FOXM1-206ENST00000536066 PRM1P04553 51 aa2.66□□□□□ -1.98
FOXM1-206ENST00000536066 KRTAP5-5Q701N2 237 aaPredicted RBP2.64□□□□□ -1.99
FOXM1-206ENST00000536066 MT1AP04731 61 aa2.64□□□□□ -1.99
FOXM1-206ENST00000536066 KRTAP6-1Q3LI64 71 aa2.61□□□□□ -1.99
FOXM1-206ENST00000536066 GPR98Q8WXG9 6306 aa2.6□□□□□ -1.99
FOXM1-206ENST00000536066 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
FOXM1-206ENST00000536066 SYNE1Q8NF91 8797 aaKnown RBP2.56□□□□□ -2
FOXM1-206ENST00000536066 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.56□□□□□ -2
FOXM1-206ENST00000536066 KRTAP20-1Q3LI63 56 aa2.52□□□□□ -2.01
FOXM1-206ENST00000536066 KRTAP6-2Q3LI66 62 aa2.44□□□□□ -2.02
FOXM1-206ENST00000536066 KRTAP5-4Q6L8H1 288 aa2.41□□□□□ -2.02
FOXM1-206ENST00000536066 OBSCNQ5VST9 7968 aa2.4□□□□□ -2.02
FOXM1-206ENST00000536066 MT4P47944 62 aa2.35□□□□□ -2.03
FOXM1-206ENST00000536066 MUC5BQ9HC84 5762 aaPredicted RBP2.32□□□□□ -2.04
FOXM1-206ENST00000536066 KRTAP5-1Q6L8H4 278 aa2.25□□□□□ -2.05
FOXM1-206ENST00000536066 KRTAP20-2Q3LI61 65 aa2.24□□□□□ -2.05
FOXM1-206ENST00000536066 KRTAP5-2Q701N4 177 aa2.23□□□□□ -2.05
FOXM1-206ENST00000536066 AHNAKQ09666 5890 aaKnown RBP2.17□□□□□ -2.06
FOXM1-206ENST00000536066 KRTAP4-4Q9BYR3 166 aa2.09□□□□□ -2.07
FOXM1-206ENST00000536066 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
FOXM1-206ENST00000536066 AHNAK2Q8IVF2 5795 aa2.08□□□□□ -2.08
FOXM1-206ENST00000536066 MUC5ACP98088 5654 aa1.98□□□□□ -2.09
FOXM1-206ENST00000536066 KRTAP5-10Q6L8G5 202 aa1.97□□□□□ -2.09
FOXM1-206ENST00000536066 LCE1CQ5T751 118 aa1.94□□□□□ -2.1
FOXM1-206ENST00000536066 LCE1BQ5T7P3 118 aa1.94□□□□□ -2.1
FOXM1-206ENST00000536066 KRTAP5-8O75690 187 aa1.9□□□□□ -2.11
FOXM1-206ENST00000536066 KRTAP5-7Q6L8G8 165 aa1.82□□□□□ -2.12
FOXM1-206ENST00000536066 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
FOXM1-206ENST00000536066 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
FOXM1-206ENST00000536066 PHGR1C9JFL3 82 aa1.4□□□□□ -2.18
FOXM1-206ENST00000536066 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 150.3 ms