RNA–Protein interactions for RNA: ENST00000535993.1

CCND1-202, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-202ENST00000535993 KRTAP4-9Q9BYQ8 210 aa4.48□□□□□ -1.69
CCND1-202ENST00000535993 C10orf95Q9H7T3 257 aa4.45□□□□□ -1.7
CCND1-202ENST00000535993 CDC42SE1Q9NRR8 79 aa4.45□□□□□ -1.7
CCND1-202ENST00000535993 TNP1P09430 55 aa4.43□□□□□ -1.7
CCND1-202ENST00000535993 MT1GP13640 62 aa4.43□□□□□ -1.7
CCND1-202ENST00000535993 KRTAP19-5Q3LI72 72 aa4.42□□□□□ -1.7
CCND1-202ENST00000535993 PP632Q6XCG6 107 aa4.42□□□□□ -1.7
CCND1-202ENST00000535993 LCE1DQ5T752 114 aa4.36□□□□□ -1.71
CCND1-202ENST00000535993 LCE4AQ5TA78 99 aa4.35□□□□□ -1.71
CCND1-202ENST00000535993 MT1MQ8N339 61 aa4.34□□□□□ -1.71
CCND1-202ENST00000535993 LCE3AQ5TA76 89 aa4.33□□□□□ -1.72
CCND1-202ENST00000535993 KRTAP25-1Q3LHN0 102 aa4.32□□□□□ -1.72
CCND1-202ENST00000535993 MT1LQ93083 61 aa4.32□□□□□ -1.72
CCND1-202ENST00000535993 HMCN1Q96RW7 5635 aa4.31□□□□□ -1.72
CCND1-202ENST00000535993 MT4P47944 62 aa4.31□□□□□ -1.72
CCND1-202ENST00000535993 BRK1Q8WUW1 75 aa4.29□□□□□ -1.72
CCND1-202ENST00000535993 ROMO1P60602 79 aa4.26□□□□□ -1.73
CCND1-202ENST00000535993 KRTAP5-4Q6L8H1 288 aa4.22□□□□□ -1.73
CCND1-202ENST00000535993 KRTAP4-3Q9BYR4 195 aa4.21□□□□□ -1.74
CCND1-202ENST00000535993 AHNAK2Q8IVF2 5795 aa4.2□□□□□ -1.74
CCND1-202ENST00000535993 KRTAP12-3P60328 96 aa4.17□□□□□ -1.74
CCND1-202ENST00000535993 KRTAP4-6Q9BYQ5 205 aa4.15□□□□□ -1.75
CCND1-202ENST00000535993 KRTAP23-1A1A580 65 aa4.14□□□□□ -1.75
CCND1-202ENST00000535993 KRTAP5-10Q6L8G5 202 aa4.13□□□□□ -1.75
CCND1-202ENST00000535993 KRTAP4-7Q9BYR0 210 aa4.07□□□□□ -1.76
CCND1-202ENST00000535993 KRTAP19-4Q3LI73 84 aa4.03□□□□□ -1.76
CCND1-202ENST00000535993 PMAIP1Q13794 54 aa4.01□□□□□ -1.77
CCND1-202ENST00000535993 KRTAP5-7Q6L8G8 165 aa4□□□□□ -1.77
CCND1-202ENST00000535993 KRTAP5-3Q6L8H2 238 aa4□□□□□ -1.77
CCND1-202ENST00000535993 KRTAP20-2Q3LI61 65 aa3.99□□□□□ -1.77
CCND1-202ENST00000535993 KRTAP5-5Q701N2 237 aaPredicted RBP3.99□□□□□ -1.77
CCND1-202ENST00000535993 SPRR5A0A1B0GTR4 108 aa3.98□□□□□ -1.77
CCND1-202ENST00000535993 PRO0628Q9UI54 55 aa3.97□□□□□ -1.77
CCND1-202ENST00000535993 KRTAP12-4P60329 112 aa3.96□□□□□ -1.78
CCND1-202ENST00000535993 KRTAP15-1Q3LI76 137 aa3.94□□□□□ -1.78
CCND1-202ENST00000535993 LOC100996750A0A140TA64 210 aa3.87□□□□□ -1.79
CCND1-202ENST00000535993 LCE3CQ5T5A8 94 aa3.86□□□□□ -1.79
CCND1-202ENST00000535993 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
CCND1-202ENST00000535993 PRAC1Q96KF2 57 aa3.8□□□□□ -1.8
CCND1-202ENST00000535993 KTN1-AS1Q86SY8 53 aa3.76□□□□□ -1.81
CCND1-202ENST00000535993 KRTAP4-11Q9BYQ6 195 aa3.69□□□□□ -1.82
CCND1-202ENST00000535993 MT1AP04731 61 aa3.68□□□□□ -1.82
CCND1-202ENST00000535993 KRTAP9-6A8MVA2 160 aa3.67□□□□□ -1.82
CCND1-202ENST00000535993 KRTAP5-2Q701N4 177 aa3.67□□□□□ -1.82
CCND1-202ENST00000535993 KRTAP6-1Q3LI64 71 aa3.65□□□□□ -1.83
CCND1-202ENST00000535993 SVIPQ8NHG7 77 aa3.62□□□□□ -1.83
CCND1-202ENST00000535993 KRTAP9-4Q9BYQ2 154 aa3.58□□□□□ -1.84
CCND1-202ENST00000535993 KRTAP5-8O75690 187 aa3.55□□□□□ -1.84
CCND1-202ENST00000535993 KRTAP6-2Q3LI66 62 aa3.53□□□□□ -1.84
CCND1-202ENST00000535993 AHNAKQ09666 5890 aaKnown RBP3.52□□□□□ -1.85
CCND1-202ENST00000535993 MUC5BQ9HC84 5762 aaPredicted RBP3.51□□□□□ -1.85
CCND1-202ENST00000535993 MUC5ACP98088 5654 aa3.46□□□□□ -1.86
CCND1-202ENST00000535993 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
CCND1-202ENST00000535993 KRTAP9-9Q9BYP9 154 aa3.43□□□□□ -1.86
CCND1-202ENST00000535993 MT3P25713 68 aa3.39□□□□□ -1.87
CCND1-202ENST00000535993 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
CCND1-202ENST00000535993 LUZP6Q538Z0 58 aa3.21□□□□□ -1.9
CCND1-202ENST00000535993 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
CCND1-202ENST00000535993 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
CCND1-202ENST00000535993 KRTAP4-2Q9BYR5 136 aa2.96□□□□□ -1.94
CCND1-202ENST00000535993 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
CCND1-202ENST00000535993 NDUFAF8A1L188 74 aa2.83□□□□□ -1.96
CCND1-202ENST00000535993 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
CCND1-202ENST00000535993 KRTAP4-12Q9BQ66 201 aa2.74□□□□□ -1.97
CCND1-202ENST00000535993 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
CCND1-202ENST00000535993 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
CCND1-202ENST00000535993 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.99
CCND1-202ENST00000535993 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
CCND1-202ENST00000535993 A0A0A0MQY5 61 aa2.43□□□□□ -2.02
CCND1-202ENST00000535993 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
CCND1-202ENST00000535993 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
CCND1-202ENST00000535993 INE1O15225 51 aa2.34□□□□□ -2.03
CCND1-202ENST00000535993 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
CCND1-202ENST00000535993 PRM1P04553 51 aa2.2□□□□□ -2.06
CCND1-202ENST00000535993 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.06
CCND1-202ENST00000535993 H3BS24 57 aa2.02□□□□□ -2.09
CCND1-202ENST00000535993 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
CCND1-202ENST00000535993 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 58.2 ms