RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 ROMO1P60602 79 aa6.15□□□□□ -1.42
ATL3-202ENST00000535789 LCE3BQ5TA77 95 aa6.15□□□□□ -1.42
ATL3-202ENST00000535789 MT1EP04732 61 aa6.13□□□□□ -1.43
ATL3-202ENST00000535789 TNP1P09430 55 aa6.11□□□□□ -1.43
ATL3-202ENST00000535789 KRTAP25-1Q3LHN0 102 aa6.07□□□□□ -1.44
ATL3-202ENST00000535789 LCE5AQ5TCM9 118 aa6.07□□□□□ -1.44
ATL3-202ENST00000535789 PMAIP1Q13794 54 aa6.06□□□□□ -1.44
ATL3-202ENST00000535789 KRTAP19-3Q7Z4W3 81 aa6.04□□□□□ -1.44
ATL3-202ENST00000535789 KRTAP19-5Q3LI72 72 aa6.01□□□□□ -1.45
ATL3-202ENST00000535789 DSTQ03001 7570 aaKnown RBP5.99□□□□□ -1.45
ATL3-202ENST00000535789 LCE3AQ5TA76 89 aa5.94□□□□□ -1.46
ATL3-202ENST00000535789 KRTAP23-1A1A580 65 aa5.87□□□□□ -1.47
ATL3-202ENST00000535789 MT1GP13640 62 aa5.86□□□□□ -1.47
ATL3-202ENST00000535789 MT1LQ93083 61 aa5.86□□□□□ -1.47
ATL3-202ENST00000535789 MT1MQ8N339 61 aa5.83□□□□□ -1.48
ATL3-202ENST00000535789 PP632Q6XCG6 107 aa5.78□□□□□ -1.48
ATL3-202ENST00000535789 KTN1-AS1Q86SY8 53 aa5.76□□□□□ -1.49
ATL3-202ENST00000535789 KRTAP4-9Q9BYQ8 210 aa5.75□□□□□ -1.49
ATL3-202ENST00000535789 PRAC1Q96KF2 57 aa5.74□□□□□ -1.49
ATL3-202ENST00000535789 KRTAP4-3Q9BYR4 195 aa5.74□□□□□ -1.49
ATL3-202ENST00000535789 KRTAP12-3P60328 96 aa5.69□□□□□ -1.5
ATL3-202ENST00000535789 H3BS24 57 aa5.66□□□□□ -1.5
ATL3-202ENST00000535789 KRTAP4-12Q9BQ66 201 aa5.65□□□□□ -1.5
ATL3-202ENST00000535789 GPR98Q8WXG9 6306 aa5.64□□□□□ -1.51
ATL3-202ENST00000535789 LCE1DQ5T752 114 aa5.63□□□□□ -1.51
ATL3-202ENST00000535789 KRTAP4-7Q9BYR0 210 aa5.62□□□□□ -1.51
ATL3-202ENST00000535789 HMCN1Q96RW7 5635 aa5.58□□□□□ -1.52
ATL3-202ENST00000535789 LCE4AQ5TA78 99 aa5.57□□□□□ -1.52
ATL3-202ENST00000535789 KRTAP5-4Q6L8H1 288 aa5.56□□□□□ -1.52
ATL3-202ENST00000535789 MT4P47944 62 aa5.54□□□□□ -1.52
ATL3-202ENST00000535789 KRTAP9-9Q9BYP9 154 aa5.52□□□□□ -1.53
ATL3-202ENST00000535789 KRTAP9-4Q9BYQ2 154 aa5.52□□□□□ -1.53
ATL3-202ENST00000535789 KRTAP15-1Q3LI76 137 aa5.51□□□□□ -1.53
ATL3-202ENST00000535789 SVIPQ8NHG7 77 aa5.4□□□□□ -1.54
ATL3-202ENST00000535789 AHNAK2Q8IVF2 5795 aa5.39□□□□□ -1.55
ATL3-202ENST00000535789 KRTAP5-5Q701N2 237 aaPredicted RBP5.38□□□□□ -1.55
ATL3-202ENST00000535789 KRTAP19-4Q3LI73 84 aa5.36□□□□□ -1.55
ATL3-202ENST00000535789 LCE3CQ5T5A8 94 aa5.31□□□□□ -1.56
ATL3-202ENST00000535789 SYNE1Q8NF91 8797 aaKnown RBP5.23□□□□□ -1.57
ATL3-202ENST00000535789 KRTAP20-2Q3LI61 65 aa5.23□□□□□ -1.57
ATL3-202ENST00000535789 KRTAP5-10Q6L8G5 202 aa5.23□□□□□ -1.57
ATL3-202ENST00000535789 SPRR5A0A1B0GTR4 108 aa5.15□□□□□ -1.59
ATL3-202ENST00000535789 KRTAP5-3Q6L8H2 238 aa5.1□□□□□ -1.59
ATL3-202ENST00000535789 KRTAP12-4P60329 112 aa5.08□□□□□ -1.6
ATL3-202ENST00000535789 KRTAP9-6A8MVA2 160 aa5.04□□□□□ -1.6
ATL3-202ENST00000535789 KRTAP5-7Q6L8G8 165 aa4.99□□□□□ -1.61
ATL3-202ENST00000535789 KRTAP6-1Q3LI64 71 aa4.98□□□□□ -1.61
ATL3-202ENST00000535789 MT1AP04731 61 aa4.97□□□□□ -1.61
ATL3-202ENST00000535789 KRTAP4-2Q9BYR5 136 aa4.97□□□□□ -1.61
ATL3-202ENST00000535789 KRTAP4-11Q9BYQ6 195 aa4.9□□□□□ -1.63
ATL3-202ENST00000535789 KRTAP5-2Q701N4 177 aa4.89□□□□□ -1.63
ATL3-202ENST00000535789 KRTAP6-2Q3LI66 62 aa4.72□□□□□ -1.65
ATL3-202ENST00000535789 LUZP6Q538Z0 58 aa4.66□□□□□ -1.66
ATL3-202ENST00000535789 KRTAP5-8O75690 187 aa4.62□□□□□ -1.67
ATL3-202ENST00000535789 OBSCNQ5VST9 7968 aa4.59□□□□□ -1.68
ATL3-202ENST00000535789 MT3P25713 68 aa4.48□□□□□ -1.69
ATL3-202ENST00000535789 NDUFAF8A1L188 74 aa4.4□□□□□ -1.71
ATL3-202ENST00000535789 AHNAKQ09666 5890 aaKnown RBP4.4□□□□□ -1.71
ATL3-202ENST00000535789 MUC5BQ9HC84 5762 aaPredicted RBP4.38□□□□□ -1.71
ATL3-202ENST00000535789 MUC5ACP98088 5654 aa4.38□□□□□ -1.71
ATL3-202ENST00000535789 KRTAP5-1Q6L8H4 278 aa4.38□□□□□ -1.71
ATL3-202ENST00000535789 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
ATL3-202ENST00000535789 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
ATL3-202ENST00000535789 LCE1BQ5T7P3 118 aa3.88□□□□□ -1.79
ATL3-202ENST00000535789 LCE1CQ5T751 118 aa3.84□□□□□ -1.79
ATL3-202ENST00000535789 LCE3EQ5T5B0 92 aa3.79□□□□□ -1.8
ATL3-202ENST00000535789 A0A0A0MQY5 61 aa3.76□□□□□ -1.81
ATL3-202ENST00000535789 INE1O15225 51 aa3.62□□□□□ -1.83
ATL3-202ENST00000535789 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.53□□□□□ -1.84
ATL3-202ENST00000535789 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
ATL3-202ENST00000535789 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
ATL3-202ENST00000535789 KRTAP21-2Q3LI59 83 aa3.29□□□□□ -1.88
ATL3-202ENST00000535789 PRM1P04553 51 aa3.19□□□□□ -1.9
ATL3-202ENST00000535789 PHGR1C9JFL3 82 aa3.02□□□□□ -1.93
ATL3-202ENST00000535789 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
ATL3-202ENST00000535789 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
ATL3-202ENST00000535789 KRTAP21-1Q3LI58 79 aa2.28□□□□□ -2.04
ATL3-202ENST00000535789 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 50.6 ms