RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 KRTAP4-9Q9BYQ8 210 aa7.7□□□□□ -1.18
LTBR-205ENST00000535739 KRTAP19-3Q7Z4W3 81 aa7.68□□□□□ -1.18
LTBR-205ENST00000535739 BRK1Q8WUW1 75 aa7.59□□□□□ -1.19
LTBR-205ENST00000535739 C10orf95Q9H7T3 257 aa7.53□□□□□ -1.2
LTBR-205ENST00000535739 KRTAP19-5Q3LI72 72 aa7.48□□□□□ -1.21
LTBR-205ENST00000535739 LCE1DQ5T752 114 aa7.47□□□□□ -1.21
LTBR-205ENST00000535739 MT1GP13640 62 aa7.46□□□□□ -1.22
LTBR-205ENST00000535739 TNP1P09430 55 aa7.38□□□□□ -1.23
LTBR-205ENST00000535739 PP632Q6XCG6 107 aa7.38□□□□□ -1.23
LTBR-205ENST00000535739 MT4P47944 62 aa7.36□□□□□ -1.23
LTBR-205ENST00000535739 HMCN1Q96RW7 5635 aa7.36□□□□□ -1.23
LTBR-205ENST00000535739 LCE4AQ5TA78 99 aa7.35□□□□□ -1.23
LTBR-205ENST00000535739 MT1MQ8N339 61 aa7.35□□□□□ -1.23
LTBR-205ENST00000535739 ROMO1P60602 79 aa7.34□□□□□ -1.23
LTBR-205ENST00000535739 MT1LQ93083 61 aa7.3□□□□□ -1.24
LTBR-205ENST00000535739 KRTAP25-1Q3LHN0 102 aa7.28□□□□□ -1.24
LTBR-205ENST00000535739 AHNAK2Q8IVF2 5795 aa7.23□□□□□ -1.25
LTBR-205ENST00000535739 KRTAP4-3Q9BYR4 195 aa7.23□□□□□ -1.25
LTBR-205ENST00000535739 PRO0628Q9UI54 55 aa7.23□□□□□ -1.25
LTBR-205ENST00000535739 PMAIP1Q13794 54 aa7.19□□□□□ -1.26
LTBR-205ENST00000535739 KRTAP5-4Q6L8H1 288 aa7.17□□□□□ -1.26
LTBR-205ENST00000535739 LCE3AQ5TA76 89 aa7.16□□□□□ -1.26
LTBR-205ENST00000535739 KRTAP4-6Q9BYQ5 205 aa7.12□□□□□ -1.27
LTBR-205ENST00000535739 KRTAP5-10Q6L8G5 202 aa7.08□□□□□ -1.28
LTBR-205ENST00000535739 KRTAP23-1A1A580 65 aa7.05□□□□□ -1.28
LTBR-205ENST00000535739 KRTAP4-7Q9BYR0 210 aa6.97□□□□□ -1.29
LTBR-205ENST00000535739 LOC100996750A0A140TA64 210 aa6.86□□□□□ -1.31
LTBR-205ENST00000535739 KRTAP12-3P60328 96 aa6.86□□□□□ -1.31
LTBR-205ENST00000535739 KRTAP5-3Q6L8H2 238 aa6.85□□□□□ -1.31
LTBR-205ENST00000535739 KRTAP5-7Q6L8G8 165 aa6.84□□□□□ -1.31
LTBR-205ENST00000535739 KRTAP20-2Q3LI61 65 aa6.8□□□□□ -1.32
LTBR-205ENST00000535739 KRTAP5-5Q701N2 237 aaPredicted RBP6.76□□□□□ -1.33
LTBR-205ENST00000535739 PRAC1Q96KF2 57 aa6.75□□□□□ -1.33
LTBR-205ENST00000535739 KTN1-AS1Q86SY8 53 aa6.74□□□□□ -1.33
LTBR-205ENST00000535739 SPRR5A0A1B0GTR4 108 aa6.71□□□□□ -1.34
LTBR-205ENST00000535739 KRTAP12-4P60329 112 aa6.65□□□□□ -1.34
LTBR-205ENST00000535739 SYNE1Q8NF91 8797 aaKnown RBP6.64□□□□□ -1.35
LTBR-205ENST00000535739 KRTAP15-1Q3LI76 137 aa6.63□□□□□ -1.35
LTBR-205ENST00000535739 KRTAP19-4Q3LI73 84 aa6.51□□□□□ -1.37
LTBR-205ENST00000535739 LCE3CQ5T5A8 94 aa6.38□□□□□ -1.39
LTBR-205ENST00000535739 SVIPQ8NHG7 77 aa6.37□□□□□ -1.39
LTBR-205ENST00000535739 KRTAP4-11Q9BYQ6 195 aa6.28□□□□□ -1.4
LTBR-205ENST00000535739 KRTAP5-2Q701N4 177 aa6.23□□□□□ -1.41
LTBR-205ENST00000535739 KRTAP6-1Q3LI64 71 aa6.21□□□□□ -1.42
LTBR-205ENST00000535739 MT1AP04731 61 aa6.2□□□□□ -1.42
LTBR-205ENST00000535739 KRTAP4-12Q9BQ66 201 aa6.17□□□□□ -1.42
LTBR-205ENST00000535739 KRTAP5-8O75690 187 aa6.08□□□□□ -1.44
LTBR-205ENST00000535739 KRTAP9-4Q9BYQ2 154 aa6.03□□□□□ -1.44
LTBR-205ENST00000535739 KRTAP9-6A8MVA2 160 aa6□□□□□ -1.45
LTBR-205ENST00000535739 OBSCNQ5VST9 7968 aa5.98□□□□□ -1.45
LTBR-205ENST00000535739 KRTAP6-2Q3LI66 62 aa5.98□□□□□ -1.45
LTBR-205ENST00000535739 AHNAKQ09666 5890 aaKnown RBP5.98□□□□□ -1.45
LTBR-205ENST00000535739 KRTAP9-9Q9BYP9 154 aa5.97□□□□□ -1.45
LTBR-205ENST00000535739 MUC5ACP98088 5654 aa5.96□□□□□ -1.46
LTBR-205ENST00000535739 MUC5BQ9HC84 5762 aaPredicted RBP5.96□□□□□ -1.46
LTBR-205ENST00000535739 H3BS24 57 aa5.85□□□□□ -1.47
LTBR-205ENST00000535739 MT3P25713 68 aa5.68□□□□□ -1.5
LTBR-205ENST00000535739 KRTAP5-1Q6L8H4 278 aa5.65□□□□□ -1.5
LTBR-205ENST00000535739 LUZP6Q538Z0 58 aa5.6□□□□□ -1.51
LTBR-205ENST00000535739 KRTAP4-2Q9BYR5 136 aa5.38□□□□□ -1.55
LTBR-205ENST00000535739 LCE1EQ5T753 118 aa5.27□□□□□ -1.57
LTBR-205ENST00000535739 NDUFAF8A1L188 74 aa5.16□□□□□ -1.58
LTBR-205ENST00000535739 LCE1BQ5T7P3 118 aa5.04□□□□□ -1.6
LTBR-205ENST00000535739 LCE1CQ5T751 118 aa4.9□□□□□ -1.63
LTBR-205ENST00000535739 LCE3DQ9BYE3 92 aa4.74□□□□□ -1.65
LTBR-205ENST00000535739 LCE3EQ5T5B0 92 aa4.56□□□□□ -1.68
LTBR-205ENST00000535739 KRTAP5-11Q6L8G4 156 aa4.47□□□□□ -1.69
LTBR-205ENST00000535739 A0A0A0MQY5 61 aa4.44□□□□□ -1.7
LTBR-205ENST00000535739 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.41□□□□□ -1.7
LTBR-205ENST00000535739 LCE1FQ5T754 118 aa4.4□□□□□ -1.71
LTBR-205ENST00000535739 INE1O15225 51 aa4.27□□□□□ -1.73
LTBR-205ENST00000535739 PHGR1C9JFL3 82 aa4.14□□□□□ -1.75
LTBR-205ENST00000535739 KRTAP21-2Q3LI59 83 aa4.09□□□□□ -1.75
LTBR-205ENST00000535739 KRTAP4-4Q9BYR3 166 aa3.83□□□□□ -1.8
LTBR-205ENST00000535739 PRM1P04553 51 aa3.79□□□□□ -1.8
LTBR-205ENST00000535739 MUC19Q7Z5P9 8384 aa3.72□□□□□ -1.81
LTBR-205ENST00000535739 KRTAP21-1Q3LI58 79 aa3.13□□□□□ -1.91
LTBR-205ENST00000535739 MUC16Q8WXI7 14507 aa2.61□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 86.1 ms