RNA–Protein interactions for RNA: ENST00000535731.1

LRP6-202, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-202ENST00000535731 HMCN1Q96RW7 5635 aa7.36□□□□□ -1.23
LRP6-202ENST00000535731 MT4P47944 62 aa7.35□□□□□ -1.23
LRP6-202ENST00000535731 A6NED7 52 aa7.31□□□□□ -1.24
LRP6-202ENST00000535731 KRTAP19-7Q3SYF9 63 aa7.31□□□□□ -1.24
LRP6-202ENST00000535731 AHNAK2Q8IVF2 5795 aa7.3□□□□□ -1.24
LRP6-202ENST00000535731 MT1EP04732 61 aa7.28□□□□□ -1.24
LRP6-202ENST00000535731 KRTAP5-7Q6L8G8 165 aa7.18□□□□□ -1.26
LRP6-202ENST00000535731 K7ERS5 55 aa7.16□□□□□ -1.26
LRP6-202ENST00000535731 MT1GP13640 62 aa7.15□□□□□ -1.26
LRP6-202ENST00000535731 PP632Q6XCG6 107 aa7.09□□□□□ -1.27
LRP6-202ENST00000535731 CDC42SE1Q9NRR8 79 aa7.09□□□□□ -1.27
LRP6-202ENST00000535731 KRTAP5-4Q6L8H1 288 aa7.08□□□□□ -1.28
LRP6-202ENST00000535731 KRTAP4-6Q9BYQ5 205 aa7.08□□□□□ -1.28
LRP6-202ENST00000535731 KRTAP5-3Q6L8H2 238 aa7.03□□□□□ -1.28
LRP6-202ENST00000535731 C10orf95Q9H7T3 257 aa7.03□□□□□ -1.28
LRP6-202ENST00000535731 MT1MQ8N339 61 aa6.98□□□□□ -1.29
LRP6-202ENST00000535731 KRTAP19-5Q3LI72 72 aa6.94□□□□□ -1.3
LRP6-202ENST00000535731 TNP1P09430 55 aa6.93□□□□□ -1.3
LRP6-202ENST00000535731 SPRR5A0A1B0GTR4 108 aa6.9□□□□□ -1.3
LRP6-202ENST00000535731 BRK1Q8WUW1 75 aa6.86□□□□□ -1.31
LRP6-202ENST00000535731 MT1LQ93083 61 aa6.84□□□□□ -1.31
LRP6-202ENST00000535731 KRTAP4-3Q9BYR4 195 aa6.83□□□□□ -1.32
LRP6-202ENST00000535731 KRTAP25-1Q3LHN0 102 aa6.79□□□□□ -1.32
LRP6-202ENST00000535731 ROMO1P60602 79 aa6.75□□□□□ -1.33
LRP6-202ENST00000535731 KRTAP20-2Q3LI61 65 aa6.73□□□□□ -1.33
LRP6-202ENST00000535731 LCE3AQ5TA76 89 aa6.71□□□□□ -1.34
LRP6-202ENST00000535731 KRTAP23-1A1A580 65 aa6.54□□□□□ -1.36
LRP6-202ENST00000535731 KRTAP12-4P60329 112 aa6.52□□□□□ -1.37
LRP6-202ENST00000535731 PMAIP1Q13794 54 aa6.47□□□□□ -1.37
LRP6-202ENST00000535731 KRTAP5-5Q701N2 237 aaPredicted RBP6.47□□□□□ -1.37
LRP6-202ENST00000535731 KRTAP4-7Q9BYR0 210 aa6.47□□□□□ -1.37
LRP6-202ENST00000535731 KRTAP12-3P60328 96 aa6.46□□□□□ -1.38
LRP6-202ENST00000535731 PRO0628Q9UI54 55 aa6.43□□□□□ -1.38
LRP6-202ENST00000535731 KRTAP4-11Q9BYQ6 195 aa6.32□□□□□ -1.4
LRP6-202ENST00000535731 SYNE1Q8NF91 8797 aaKnown RBP6.27□□□□□ -1.41
LRP6-202ENST00000535731 KRTAP15-1Q3LI76 137 aa6.21□□□□□ -1.42
LRP6-202ENST00000535731 AHNAKQ09666 5890 aaKnown RBP6.18□□□□□ -1.42
LRP6-202ENST00000535731 MUC5ACP98088 5654 aa6.16□□□□□ -1.42
LRP6-202ENST00000535731 LOC100996750A0A140TA64 210 aa6.16□□□□□ -1.42
LRP6-202ENST00000535731 KRTAP5-8O75690 187 aa6.14□□□□□ -1.43
LRP6-202ENST00000535731 KRTAP19-4Q3LI73 84 aa6.12□□□□□ -1.43
LRP6-202ENST00000535731 MUC5BQ9HC84 5762 aaPredicted RBP6.11□□□□□ -1.43
LRP6-202ENST00000535731 PRAC1Q96KF2 57 aa6.09□□□□□ -1.43
LRP6-202ENST00000535731 KRTAP5-2Q701N4 177 aa6.07□□□□□ -1.44
LRP6-202ENST00000535731 KTN1-AS1Q86SY8 53 aa6.03□□□□□ -1.44
LRP6-202ENST00000535731 LCE3CQ5T5A8 94 aa6□□□□□ -1.45
LRP6-202ENST00000535731 KRTAP9-9Q9BYP9 154 aa5.95□□□□□ -1.46
LRP6-202ENST00000535731 KRTAP6-1Q3LI64 71 aa5.82□□□□□ -1.48
LRP6-202ENST00000535731 MT1AP04731 61 aa5.81□□□□□ -1.48
LRP6-202ENST00000535731 OBSCNQ5VST9 7968 aa5.75□□□□□ -1.49
LRP6-202ENST00000535731 SVIPQ8NHG7 77 aa5.74□□□□□ -1.49
LRP6-202ENST00000535731 KRTAP9-4Q9BYQ2 154 aa5.72□□□□□ -1.49
LRP6-202ENST00000535731 KRTAP6-2Q3LI66 62 aa5.7□□□□□ -1.5
LRP6-202ENST00000535731 KRTAP9-6A8MVA2 160 aa5.62□□□□□ -1.51
LRP6-202ENST00000535731 KRTAP5-1Q6L8H4 278 aa5.59□□□□□ -1.51
LRP6-202ENST00000535731 MT3P25713 68 aa5.38□□□□□ -1.55
LRP6-202ENST00000535731 LCE1EQ5T753 118 aa5.11□□□□□ -1.59
LRP6-202ENST00000535731 LUZP6Q538Z0 58 aa5.09□□□□□ -1.59
LRP6-202ENST00000535731 KRTAP4-2Q9BYR5 136 aa4.87□□□□□ -1.63
LRP6-202ENST00000535731 LCE1BQ5T7P3 118 aa4.85□□□□□ -1.63
LRP6-202ENST00000535731 LCE1CQ5T751 118 aa4.74□□□□□ -1.65
LRP6-202ENST00000535731 KRTAP4-12Q9BQ66 201 aa4.68□□□□□ -1.66
LRP6-202ENST00000535731 NDUFAF8A1L188 74 aa4.58□□□□□ -1.68
LRP6-202ENST00000535731 KRTAP5-11Q6L8G4 156 aa4.45□□□□□ -1.7
LRP6-202ENST00000535731 LCE3DQ9BYE3 92 aa4.44□□□□□ -1.7
LRP6-202ENST00000535731 LCE1FQ5T754 118 aa4.42□□□□□ -1.7
LRP6-202ENST00000535731 PHGR1C9JFL3 82 aa4.32□□□□□ -1.72
LRP6-202ENST00000535731 LCE3EQ5T5B0 92 aa4.26□□□□□ -1.73
LRP6-202ENST00000535731 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.21□□□□□ -1.74
LRP6-202ENST00000535731 A0A0A0MQY5 61 aa3.91□□□□□ -1.78
LRP6-202ENST00000535731 KRTAP21-2Q3LI59 83 aa3.85□□□□□ -1.79
LRP6-202ENST00000535731 INE1O15225 51 aa3.77□□□□□ -1.81
LRP6-202ENST00000535731 KRTAP4-4Q9BYR3 166 aa3.62□□□□□ -1.83
LRP6-202ENST00000535731 MUC19Q7Z5P9 8384 aa3.59□□□□□ -1.83
LRP6-202ENST00000535731 PRM1P04553 51 aa3.48□□□□□ -1.85
LRP6-202ENST00000535731 KRTAP21-1Q3LI58 79 aa3.31□□□□□ -1.88
LRP6-202ENST00000535731 H3BS24 57 aa3.12□□□□□ -1.91
LRP6-202ENST00000535731 MUC16Q8WXI7 14507 aa2.59□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 85.6 ms