RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 KRTAP19-3Q7Z4W3 81 aa4.23□□□□□ -1.73
CLSTN3-206ENST00000535668 MT1EP04732 61 aa4.21□□□□□ -1.74
CLSTN3-206ENST00000535668 ROMO1P60602 79 aa4.19□□□□□ -1.74
CLSTN3-206ENST00000535668 KRTAP13-4Q3LI77 160 aa4.17□□□□□ -1.74
CLSTN3-206ENST00000535668 A0A0A0MQY5 61 aa4.16□□□□□ -1.74
CLSTN3-206ENST00000535668 KRTAP4-9Q9BYQ8 210 aa4.16□□□□□ -1.74
CLSTN3-206ENST00000535668 A0A0D9SG42 100 aa4.13□□□□□ -1.75
CLSTN3-206ENST00000535668 MT1GP13640 62 aa4.13□□□□□ -1.75
CLSTN3-206ENST00000535668 HMCN1Q96RW7 5635 aa4.12□□□□□ -1.75
CLSTN3-206ENST00000535668 KRTAP12-1P59990 96 aa4.12□□□□□ -1.75
CLSTN3-206ENST00000535668 LCE4AQ5TA78 99 aa4.12□□□□□ -1.75
CLSTN3-206ENST00000535668 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
CLSTN3-206ENST00000535668 KRTAP25-1Q3LHN0 102 aa4.1□□□□□ -1.75
CLSTN3-206ENST00000535668 SPINT4Q6UDR6 99 aa4.08□□□□□ -1.76
CLSTN3-206ENST00000535668 CAMK2N1Q7Z7J9 78 aa4.08□□□□□ -1.76
CLSTN3-206ENST00000535668 KRTAP5-4Q6L8H1 288 aa4.06□□□□□ -1.76
CLSTN3-206ENST00000535668 PP632Q6XCG6 107 aa4.06□□□□□ -1.76
CLSTN3-206ENST00000535668 PRAC1Q96KF2 57 aa4.06□□□□□ -1.76
CLSTN3-206ENST00000535668 KRTAP19-5Q3LI72 72 aa4.01□□□□□ -1.77
CLSTN3-206ENST00000535668 KRTAP5-10Q6L8G5 202 aa4.01□□□□□ -1.77
CLSTN3-206ENST00000535668 MT1MQ8N339 61 aa4.01□□□□□ -1.77
CLSTN3-206ENST00000535668 AHNAK2Q8IVF2 5795 aa3.99□□□□□ -1.77
CLSTN3-206ENST00000535668 MT1LQ93083 61 aa3.98□□□□□ -1.77
CLSTN3-206ENST00000535668 MT4P47944 62 aa3.95□□□□□ -1.78
CLSTN3-206ENST00000535668 KRTAP23-1A1A580 65 aa3.94□□□□□ -1.78
CLSTN3-206ENST00000535668 KRTAP5-7Q6L8G8 165 aa3.9□□□□□ -1.79
CLSTN3-206ENST00000535668 KRTAP4-6Q9BYQ5 205 aa3.9□□□□□ -1.79
CLSTN3-206ENST00000535668 C10orf95Q9H7T3 257 aa3.86□□□□□ -1.79
CLSTN3-206ENST00000535668 TNP1P09430 55 aa3.85□□□□□ -1.79
CLSTN3-206ENST00000535668 KRTAP5-3Q6L8H2 238 aa3.83□□□□□ -1.8
CLSTN3-206ENST00000535668 KRTAP4-3Q9BYR4 195 aa3.83□□□□□ -1.8
CLSTN3-206ENST00000535668 SPRR5A0A1B0GTR4 108 aa3.8□□□□□ -1.8
CLSTN3-206ENST00000535668 LCE3AQ5TA76 89 aa3.78□□□□□ -1.8
CLSTN3-206ENST00000535668 KRTAP5-5Q701N2 237 aaPredicted RBP3.78□□□□□ -1.8
CLSTN3-206ENST00000535668 KRTAP20-2Q3LI61 65 aa3.76□□□□□ -1.81
CLSTN3-206ENST00000535668 KRTAP12-3P60328 96 aa3.69□□□□□ -1.82
CLSTN3-206ENST00000535668 KRTAP19-4Q3LI73 84 aa3.68□□□□□ -1.82
CLSTN3-206ENST00000535668 KRTAP4-7Q9BYR0 210 aa3.68□□□□□ -1.82
CLSTN3-206ENST00000535668 KRTAP12-4P60329 112 aa3.67□□□□□ -1.82
CLSTN3-206ENST00000535668 KRTAP15-1Q3LI76 137 aa3.65□□□□□ -1.83
CLSTN3-206ENST00000535668 SYNE1Q8NF91 8797 aaKnown RBP3.61□□□□□ -1.83
CLSTN3-206ENST00000535668 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
CLSTN3-206ENST00000535668 KRTAP5-2Q701N4 177 aa3.52□□□□□ -1.85
CLSTN3-206ENST00000535668 KRTAP4-11Q9BYQ6 195 aa3.51□□□□□ -1.85
CLSTN3-206ENST00000535668 LOC100996750A0A140TA64 210 aa3.5□□□□□ -1.85
CLSTN3-206ENST00000535668 KRTAP5-8O75690 187 aa3.41□□□□□ -1.86
CLSTN3-206ENST00000535668 NDUFAF8A1L188 74 aa3.4□□□□□ -1.87
CLSTN3-206ENST00000535668 MT1AP04731 61 aa3.4□□□□□ -1.87
CLSTN3-206ENST00000535668 MUC5ACP98088 5654 aa3.4□□□□□ -1.87
CLSTN3-206ENST00000535668 AHNAKQ09666 5890 aaKnown RBP3.4□□□□□ -1.87
CLSTN3-206ENST00000535668 LCE3CQ5T5A8 94 aa3.39□□□□□ -1.87
CLSTN3-206ENST00000535668 MUC5BQ9HC84 5762 aaPredicted RBP3.39□□□□□ -1.87
CLSTN3-206ENST00000535668 KRTAP6-1Q3LI64 71 aa3.34□□□□□ -1.87
CLSTN3-206ENST00000535668 KRTAP9-4Q9BYQ2 154 aa3.31□□□□□ -1.88
CLSTN3-206ENST00000535668 OBSCNQ5VST9 7968 aa3.25□□□□□ -1.89
CLSTN3-206ENST00000535668 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
CLSTN3-206ENST00000535668 KRTAP9-9Q9BYP9 154 aa3.22□□□□□ -1.89
CLSTN3-206ENST00000535668 KRTAP9-6A8MVA2 160 aa3.21□□□□□ -1.9
CLSTN3-206ENST00000535668 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
CLSTN3-206ENST00000535668 MT3P25713 68 aa3.12□□□□□ -1.91
CLSTN3-206ENST00000535668 INE1O15225 51 aa3.03□□□□□ -1.92
CLSTN3-206ENST00000535668 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
CLSTN3-206ENST00000535668 KRTAP4-2Q9BYR5 136 aa2.81□□□□□ -1.96
CLSTN3-206ENST00000535668 LCE1CQ5T751 118 aa2.78□□□□□ -1.96
CLSTN3-206ENST00000535668 LCE1BQ5T7P3 118 aa2.78□□□□□ -1.96
CLSTN3-206ENST00000535668 LCE1FQ5T754 118 aa2.56□□□□□ -2
CLSTN3-206ENST00000535668 KRTAP5-11Q6L8G4 156 aa2.55□□□□□ -2
CLSTN3-206ENST00000535668 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
CLSTN3-206ENST00000535668 KRTAP4-12Q9BQ66 201 aa2.48□□□□□ -2.01
CLSTN3-206ENST00000535668 LCE3DQ9BYE3 92 aa2.47□□□□□ -2.01
CLSTN3-206ENST00000535668 LCE3EQ5T5B0 92 aa2.44□□□□□ -2.02
CLSTN3-206ENST00000535668 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
CLSTN3-206ENST00000535668 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
CLSTN3-206ENST00000535668 PRM1P04553 51 aa2.12□□□□□ -2.07
CLSTN3-206ENST00000535668 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
CLSTN3-206ENST00000535668 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
CLSTN3-206ENST00000535668 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
CLSTN3-206ENST00000535668 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 147.4 ms