RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 JMJD7-PLA2G4BH0Y9G9 81 aa1.41□□□□□ -2.18
ECHDC1-223ENST00000534442 MT1GP13640 62 aa1.41□□□□□ -2.18
ECHDC1-223ENST00000534442 NREPQ16612 68 aa1.41□□□□□ -2.18
ECHDC1-223ENST00000534442 PLAC4Q8WY50 150 aa1.41□□□□□ -2.18
ECHDC1-223ENST00000534442 A0A1B0GX51 115 aa1.4□□□□□ -2.19
ECHDC1-223ENST00000534442 MT-ATP8P03928 68 aa1.4□□□□□ -2.19
ECHDC1-223ENST00000534442 MT1EP04732 61 aa1.4□□□□□ -2.19
ECHDC1-223ENST00000534442 MT1MQ8N339 61 aa1.4□□□□□ -2.19
ECHDC1-223ENST00000534442 A0A087WSZ3 146 aa1.39□□□□□ -2.19
ECHDC1-223ENST00000534442 TRBV7-6A0A0J9YX20 115 aa1.39□□□□□ -2.19
ECHDC1-223ENST00000534442 SMIM20Q8N5G0 67 aa1.39□□□□□ -2.19
ECHDC1-223ENST00000534442 IGLV5-48A0A075B6I7 105 aa1.38□□□□□ -2.19
ECHDC1-223ENST00000534442 A0A087WVE0 104 aa1.38□□□□□ -2.19
ECHDC1-223ENST00000534442 ACYP1P07311 99 aa1.38□□□□□ -2.19
ECHDC1-223ENST00000534442 PDE6GP18545 87 aa1.38□□□□□ -2.19
ECHDC1-223ENST00000534442 KRTAP19-7Q3SYF9 63 aa1.38□□□□□ -2.19
ECHDC1-223ENST00000534442 Q6JHZ5 121 aa1.38□□□□□ -2.19
ECHDC1-223ENST00000534442 NDUFB1O75438 58 aa1.37□□□□□ -2.19
ECHDC1-223ENST00000534442 CSAG1Q6PB30 78 aa1.37□□□□□ -2.19
ECHDC1-223ENST00000534442 LINC00643Q86TS7 51 aa1.37□□□□□ -2.19
ECHDC1-223ENST00000534442 LOC110117498A0A087WWA1 95 aa1.36□□□□□ -2.19
ECHDC1-223ENST00000534442 TRBV7-4A0A0J9YYF1 115 aa1.35□□□□□ -2.19
ECHDC1-223ENST00000534442 HCG22E2RYF7 251 aa1.34□□□□□ -2.19
ECHDC1-223ENST00000534442 K7EQZ3 153 aa1.34□□□□□ -2.19
ECHDC1-223ENST00000534442 ATP5EP2Q5VTU8 51 aa1.34□□□□□ -2.19
ECHDC1-223ENST00000534442 CASC2Q6XLA1 102 aa1.34□□□□□ -2.19
ECHDC1-223ENST00000534442 SNURFQ9Y675 71 aa1.34□□□□□ -2.19
ECHDC1-223ENST00000534442 CCDC179H3BU77 68 aa1.33□□□□□ -2.2
ECHDC1-223ENST00000534442 ATOX1O00244 68 aa1.33□□□□□ -2.2
ECHDC1-223ENST00000534442 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
ECHDC1-223ENST00000534442 C20orf197Q8N268 126 aa1.33□□□□□ -2.2
ECHDC1-223ENST00000534442 hDV103S1A0JD37 113 aa1.32□□□□□ -2.2
ECHDC1-223ENST00000534442 H0Y9P7 68 aa1.32□□□□□ -2.2
ECHDC1-223ENST00000534442 J3KT08 172 aa1.32□□□□□ -2.2
ECHDC1-223ENST00000534442 ROMO1P60602 79 aa1.32□□□□□ -2.2
ECHDC1-223ENST00000534442 LINC00208Q96KT6 92 aa1.32□□□□□ -2.2
ECHDC1-223ENST00000534442 COX7CP15954 63 aa1.3□□□□□ -2.2
ECHDC1-223ENST00000534442 SERP2Q8N6R1 65 aa1.3□□□□□ -2.2
ECHDC1-223ENST00000534442 MRPL34Q9BQ48 92 aaKnown RBP1.3□□□□□ -2.2
ECHDC1-223ENST00000534442 S4R3F8 94 aa1.3□□□□□ -2.2
ECHDC1-223ENST00000534442 MMP24-AS1A0A0U1RRL7 71 aa1.29□□□□□ -2.2
ECHDC1-223ENST00000534442 CHKB-CPT1BH3BT56 60 aa1.29□□□□□ -2.2
ECHDC1-223ENST00000534442 UQCRQO14949 82 aa1.29□□□□□ -2.2
ECHDC1-223ENST00000534442 TMEM254Q8TBM7 123 aa1.29□□□□□ -2.2
ECHDC1-223ENST00000534442 TRAV22A0A0B4J277 110 aa1.28□□□□□ -2.2
ECHDC1-223ENST00000534442 LINC00472Q9H8W2 130 aa1.28□□□□□ -2.2
ECHDC1-223ENST00000534442 CDC42SE1Q9NRR8 79 aa1.27□□□□□ -2.21
ECHDC1-223ENST00000534442 TP53AIP1Q9HCN2 124 aa1.26□□□□□ -2.21
ECHDC1-223ENST00000534442 INE1O15225 51 aa1.25□□□□□ -2.21
ECHDC1-223ENST00000534442 MT1LQ93083 61 aa1.25□□□□□ -2.21
ECHDC1-223ENST00000534442 LOC101927531A0A1B0GV80 90 aa1.24□□□□□ -2.21
ECHDC1-223ENST00000534442 NDUFC1O43677 76 aa1.24□□□□□ -2.21
ECHDC1-223ENST00000534442 ATP5EP56381 51 aaPredicted RBP1.23□□□□□ -2.21
ECHDC1-223ENST00000534442 H7BZZ5 65 aa1.22□□□□□ -2.21
ECHDC1-223ENST00000534442 ACYP2P14621 99 aa1.22□□□□□ -2.21
ECHDC1-223ENST00000534442 KRTAP19-5Q3LI72 72 aa1.22□□□□□ -2.21
ECHDC1-223ENST00000534442 PRR15LQ9BU68 103 aa1.22□□□□□ -2.21
ECHDC1-223ENST00000534442 CYP4F30PQ9H0H9 118 aa1.22□□□□□ -2.21
ECHDC1-223ENST00000534442 SERP1Q9Y6X1 66 aa1.22□□□□□ -2.21
ECHDC1-223ENST00000534442 SPTSSBQ8NFR3 76 aa1.21□□□□□ -2.22
ECHDC1-223ENST00000534442 A0A1B0GU69 56 aa1.19□□□□□ -2.22
ECHDC1-223ENST00000534442 KRTAP6-2Q3LI66 62 aa1.19□□□□□ -2.22
ECHDC1-223ENST00000534442 BRK1Q8WUW1 75 aa1.19□□□□□ -2.22
ECHDC1-223ENST00000534442 A0A0D9SG42 100 aa1.17□□□□□ -2.22
ECHDC1-223ENST00000534442 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
ECHDC1-223ENST00000534442 DMAC1Q96GE9 116 aa1.16□□□□□ -2.22
ECHDC1-223ENST00000534442 RPS28P62857 69 aaKnown RBP1.15□□□□□ -2.23
ECHDC1-223ENST00000534442 M0QZ58 72 aa1.14□□□□□ -2.23
ECHDC1-223ENST00000534442 C10orf95Q9H7T3 257 aa1.14□□□□□ -2.23
ECHDC1-223ENST00000534442 MIR22HGQ0VDD5 57 aa1.13□□□□□ -2.23
ECHDC1-223ENST00000534442 SPATA8Q6RVD6 105 aa1.13□□□□□ -2.23
ECHDC1-223ENST00000534442 UQCR11O14957 56 aa1.12□□□□□ -2.23
ECHDC1-223ENST00000534442 LINC01558Q9Y6Z2 57 aa1.12□□□□□ -2.23
ECHDC1-223ENST00000534442 KRTAP6-1Q3LI64 71 aa1.07□□□□□ -2.24
ECHDC1-223ENST00000534442 MT1AP04731 61 aa1.06□□□□□ -2.24
ECHDC1-223ENST00000534442 TNP1P09430 55 aa0.98□□□□□ -2.25
ECHDC1-223ENST00000534442 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
ECHDC1-223ENST00000534442 PRM1P04553 51 aa0.56□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 84.7 ms