RNA–Protein interactions for RNA: ENST00000534262.1

HIPK3-206, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 1 (best)

Gene HIPK3, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-206ENST00000534262 SPRR1AP35321 89 aa0.7□□□□□ -2.3
HIPK3-206ENST00000534262 PRLHP81277 87 aa0.7□□□□□ -2.3
HIPK3-206ENST00000534262 ADIRFQ15847 76 aa0.7□□□□□ -2.3
HIPK3-206ENST00000534262 BVES-AS1Q5T3Y7 98 aa0.7□□□□□ -2.3
HIPK3-206ENST00000534262 KANTRA0A1W2PQU2 76 aa0.69□□□□□ -2.3
HIPK3-206ENST00000534262 KRTAP19-2Q3LHN2 52 aa0.69□□□□□ -2.3
HIPK3-206ENST00000534262 H1FX-AS1Q4G0G2 97 aa0.69□□□□□ -2.3
HIPK3-206ENST00000534262 RPL39LQ96EH5 51 aaKnown RBP0.69□□□□□ -2.3
HIPK3-206ENST00000534262 SMCO4Q9NRQ5 59 aa0.69□□□□□ -2.3
HIPK3-206ENST00000534262 CDKN2A-AS1Q9UH64 79 aa0.69□□□□□ -2.3
HIPK3-206ENST00000534262 GPR98Q8WXG9 6306 aa0.68□□□□□ -2.3
HIPK3-206ENST00000534262 K7EQZ3 153 aa0.68□□□□□ -2.3
HIPK3-206ENST00000534262 MT2AP02795 61 aa0.68□□□□□ -2.3
HIPK3-206ENST00000534262 SPRR2EP22531 72 aa0.68□□□□□ -2.3
HIPK3-206ENST00000534262 SPRR2DP22532 72 aa0.68□□□□□ -2.3
HIPK3-206ENST00000534262 COX7BP24311 80 aa0.68□□□□□ -2.3
HIPK3-206ENST00000534262 SPRR2BP35325 72 aa0.68□□□□□ -2.3
HIPK3-206ENST00000534262 SPRR2AP35326 72 aa0.68□□□□□ -2.3
HIPK3-206ENST00000534262 MACF1Q9UPN3 7388 aaKnown RBP0.67□□□□□ -2.3
HIPK3-206ENST00000534262 IGIPA6NJ69 53 aa0.67□□□□□ -2.3
HIPK3-206ENST00000534262 RPL39P62891 51 aaKnown RBP0.67□□□□□ -2.3
HIPK3-206ENST00000534262 GNG13Q9P2W3 67 aa0.67□□□□□ -2.3
HIPK3-206ENST00000534262 MUC17Q685J3 4493 aa0.67□□□□□ -2.3
HIPK3-206ENST00000534262 LPAP08519 4548 aa0.66□□□□□ -2.3
HIPK3-206ENST00000534262 SMIM27A0A1W2PRY6 76 aa0.66□□□□□ -2.3
HIPK3-206ENST00000534262 KRTAP8-1Q8IUC2 63 aa0.66□□□□□ -2.3
HIPK3-206ENST00000534262 DEFB105AQ8NG35 78 aa0.66□□□□□ -2.3
HIPK3-206ENST00000534262 SPRR2FQ96RM1 72 aa0.66□□□□□ -2.3
HIPK3-206ENST00000534262 SYNE2Q8WXH0 6885 aaKnown RBP0.65□□□□□ -2.31
HIPK3-206ENST00000534262 IGLV5-48A0A075B6I7 105 aa0.65□□□□□ -2.31
HIPK3-206ENST00000534262 H3BUT2 72 aa0.65□□□□□ -2.31
HIPK3-206ENST00000534262 MT1FP04733 61 aa0.65□□□□□ -2.31
HIPK3-206ENST00000534262 PLNP26678 52 aa0.65□□□□□ -2.31
HIPK3-206ENST00000534262 H0YGX0 51 aa0.64□□□□□ -2.31
HIPK3-206ENST00000534262 SMIM13P0DJ93 91 aa0.64□□□□□ -2.31
HIPK3-206ENST00000534262 C18orf32Q8TCD1 76 aa0.64□□□□□ -2.31
HIPK3-206ENST00000534262 LINC01546A6NGU7 62 aa0.63□□□□□ -2.31
HIPK3-206ENST00000534262 KRTAP19-8Q3LI54 63 aa0.63□□□□□ -2.31
HIPK3-206ENST00000534262 SPRR2GQ9BYE4 73 aa0.63□□□□□ -2.31
HIPK3-206ENST00000534262 NEBP20929 6669 aa0.63□□□□□ -2.31
HIPK3-206ENST00000534262 FLGP20930 4061 aaPredicted RBP0.62□□□□□ -2.31
HIPK3-206ENST00000534262 H0YAA0 97 aa0.61□□□□□ -2.31
HIPK3-206ENST00000534262 LINC00308Q8TCZ7 52 aa0.61□□□□□ -2.31
HIPK3-206ENST00000534262 S4R3F8 94 aa0.61□□□□□ -2.31
HIPK3-206ENST00000534262 MT1GP13640 62 aa0.59□□□□□ -2.31
HIPK3-206ENST00000534262 MRPL34Q9BQ48 92 aaKnown RBP0.59□□□□□ -2.31
HIPK3-206ENST00000534262 USH2AO75445 5202 aa0.59□□□□□ -2.32
HIPK3-206ENST00000534262 NREPQ16612 68 aa0.58□□□□□ -2.32
HIPK3-206ENST00000534262 KMT2DO14686 5537 aa0.57□□□□□ -2.32
HIPK3-206ENST00000534262 MT1BP07438 61 aa0.57□□□□□ -2.32
HIPK3-206ENST00000534262 ATP5EP2Q5VTU8 51 aa0.57□□□□□ -2.32
HIPK3-206ENST00000534262 M0QZ58 72 aa0.56□□□□□ -2.32
HIPK3-206ENST00000534262 KRTAP21-1Q3LI58 79 aa0.56□□□□□ -2.32
HIPK3-206ENST00000534262 MT4P47944 62 aa0.55□□□□□ -2.32
HIPK3-206ENST00000534262 DSTQ03001 7570 aaKnown RBP0.54□□□□□ -2.32
HIPK3-206ENST00000534262 MUC12Q9UKN1 5478 aa0.53□□□□□ -2.32
HIPK3-206ENST00000534262 AHNAKQ09666 5890 aaKnown RBP0.53□□□□□ -2.33
HIPK3-206ENST00000534262 COX8AP10176 69 aa0.52□□□□□ -2.33
HIPK3-206ENST00000534262 MT1XP80297 61 aa0.52□□□□□ -2.33
HIPK3-206ENST00000534262 ATXN8Q156A1 80 aa0.52□□□□□ -2.33
HIPK3-206ENST00000534262 UBL5Q9BZL1 73 aa0.52□□□□□ -2.33
HIPK3-206ENST00000534262 MDN1Q9NU22 5596 aa0.51□□□□□ -2.33
HIPK3-206ENST00000534262 MT1MQ8N339 61 aa0.51□□□□□ -2.33
HIPK3-206ENST00000534262 MMP24-AS1A0A0U1RRL7 71 aa0.5□□□□□ -2.33
HIPK3-206ENST00000534262 TNP1P09430 55 aa0.5□□□□□ -2.33
HIPK3-206ENST00000534262 KRTAP20-2Q3LI61 65 aa0.5□□□□□ -2.33
HIPK3-206ENST00000534262 MT1EP04732 61 aa0.48□□□□□ -2.33
HIPK3-206ENST00000534262 MUC5BQ9HC84 5762 aaPredicted RBP0.47□□□□□ -2.33
HIPK3-206ENST00000534262 MT1LQ93083 61 aa0.47□□□□□ -2.33
HIPK3-206ENST00000534262 SYNE1Q8NF91 8797 aaKnown RBP0.46□□□□□ -2.34
HIPK3-206ENST00000534262 KRTAP19-7Q3SYF9 63 aa0.46□□□□□ -2.34
HIPK3-206ENST00000534262 KRTAP19-5Q3LI72 72 aa0.44□□□□□ -2.34
HIPK3-206ENST00000534262 MUC5ACP98088 5654 aa0.42□□□□□ -2.34
HIPK3-206ENST00000534262 PHGR1C9JFL3 82 aa0.42□□□□□ -2.34
HIPK3-206ENST00000534262 MT1AP04731 61 aa0.41□□□□□ -2.34
HIPK3-206ENST00000534262 KRTAP6-2Q3LI66 62 aa0.38□□□□□ -2.35
HIPK3-206ENST00000534262 PRM1P04553 51 aa0.36□□□□□ -2.35
HIPK3-206ENST00000534262 KRTAP6-1Q3LI64 71 aa0.35□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 37.6 ms