RNA–Protein interactions for RNA: ENST00000534060.5

ARHGAP42-208, Transcript of Rho GTPase activating protein 42, human

TSL 3

Gene ARHGAP42, Length 501 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP42-208	ENST00000534060	SPEG	Q15772	3267 aa		0.35	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	LOC400499	M0QZD8	3231 aa		0.34	□□□□□ -2.36
ARHGAP42-208	ENST00000534060	SPRR2G	Q9BYE4	73 aa		0.34	□□□□□ -2.36
ARHGAP42-208	ENST00000534060	LAMA1	P25391	3075 aa		0.34	□□□□□ -2.36
ARHGAP42-208	ENST00000534060	IGSF10	Q6WRI0	2623 aa		0.33	□□□□□ -2.36
ARHGAP42-208	ENST00000534060	CEP295	Q9C0D2	2601 aa		0.33	□□□□□ -2.36
ARHGAP42-208	ENST00000534060	VPS13C	Q709C8	3753 aa		0.33	□□□□□ -2.36
ARHGAP42-208	ENST00000534060	GOLGB1	Q14789	3259 aa	Known RBP	0.32	□□□□□ -2.36
ARHGAP42-208	ENST00000534060	CSMD2	Q7Z408	3487 aa		0.32	□□□□□ -2.36
ARHGAP42-208	ENST00000534060	XIRP2	A4UGR9	3374 aa		0.32	□□□□□ -2.36
ARHGAP42-208	ENST00000534060	SPTAN1	Q13813	2472 aa	Known RBP	0.32	□□□□□ -2.36
ARHGAP42-208	ENST00000534060	MUC5B	Q9HC84	5762 aa	Predicted RBP	0.32	□□□□□ -2.36
ARHGAP42-208	ENST00000534060	USP34	Q70CQ2	3546 aa		0.31	□□□□□ -2.36
ARHGAP42-208	ENST00000534060	LAMA2	P24043	3122 aa	Known RBP	0.31	□□□□□ -2.36
ARHGAP42-208	ENST00000534060	TLN1	Q9Y490	2541 aa	Known RBP	0.31	□□□□□ -2.36
ARHGAP42-208	ENST00000534060	DEFB4A	O15263	64 aa		0.31	□□□□□ -2.36
ARHGAP42-208	ENST00000534060	EP400	Q96L91	3159 aa		0.31	□□□□□ -2.36
ARHGAP42-208	ENST00000534060	UTRN	P46939	3433 aa		0.3	□□□□□ -2.36
ARHGAP42-208	ENST00000534060	MYO9A	B2RTY4	2548 aa		0.29	□□□□□ -2.36
ARHGAP42-208	ENST00000534060	EYS	Q5T1H1	3165 aa		0.28	□□□□□ -2.36
ARHGAP42-208	ENST00000534060	MT1X	P80297	61 aa		0.28	□□□□□ -2.36
ARHGAP42-208	ENST00000534060	KRTAP19-8	Q3LI54	63 aa		0.28	□□□□□ -2.36
ARHGAP42-208	ENST00000534060	LRP2	P98164	4655 aa		0.28	□□□□□ -2.37
ARHGAP42-208	ENST00000534060	GPR98	Q8WXG9	6306 aa		0.27	□□□□□ -2.37
ARHGAP42-208	ENST00000534060	HERC1	Q15751	4861 aa		0.27	□□□□□ -2.37
ARHGAP42-208	ENST00000534060	VCAN	P13611	3396 aa		0.26	□□□□□ -2.37
ARHGAP42-208	ENST00000534060	PCNT	O95613	3336 aa		0.26	□□□□□ -2.37
ARHGAP42-208	ENST00000534060	ASPM	Q8IZT6	3477 aa		0.26	□□□□□ -2.37
ARHGAP42-208	ENST00000534060	PHGR1	C9JFL3	82 aa		0.26	□□□□□ -2.37
ARHGAP42-208	ENST00000534060	HMCN2	Q8NDA2	5059 aa		0.26	□□□□□ -2.37
ARHGAP42-208	ENST00000534060	STARD9	Q9P2P6	4700 aa		0.25	□□□□□ -2.37
ARHGAP42-208	ENST00000534060	AHNAK	Q09666	5890 aa	Known RBP	0.25	□□□□□ -2.37
ARHGAP42-208	ENST00000534060	MYO15A	Q9UKN7	3530 aa		0.24	□□□□□ -2.37
ARHGAP42-208	ENST00000534060	KRTAP19-2	Q3LHN2	52 aa		0.24	□□□□□ -2.37
ARHGAP42-208	ENST00000534060	KRTAP19-7	Q3SYF9	63 aa		0.24	□□□□□ -2.37
ARHGAP42-208	ENST00000534060	CENPF	P49454	3210 aa		0.23	□□□□□ -2.37
ARHGAP42-208	ENST00000534060	USH2A	O75445	5202 aa		0.22	□□□□□ -2.37
ARHGAP42-208	ENST00000534060	UNC80	Q8N2C7	3258 aa		0.22	□□□□□ -2.37
ARHGAP42-208	ENST00000534060	BRCA2	P51587	3418 aa		0.22	□□□□□ -2.37
ARHGAP42-208	ENST00000534060	MACF1	Q9UPN3	7388 aa	Known RBP	0.21	□□□□□ -2.38
ARHGAP42-208	ENST00000534060	MT2A	P02795	61 aa		0.21	□□□□□ -2.38
ARHGAP42-208	ENST00000534060	MT1M	Q8N339	61 aa		0.21	□□□□□ -2.38
ARHGAP42-208	ENST00000534060	WDFY3	Q8IZQ1	3526 aa		0.21	□□□□□ -2.38
ARHGAP42-208	ENST00000534060	KMT2C	Q8NEZ4	4911 aa	Known RBP	0.2	□□□□□ -2.38
ARHGAP42-208	ENST00000534060	MUC5AC	P98088	5654 aa		0.2	□□□□□ -2.38
ARHGAP42-208	ENST00000534060	SSPO	A2VEC9	5147 aa		0.2	□□□□□ -2.38
ARHGAP42-208	ENST00000534060	KMT2D	O14686	5537 aa		0.2	□□□□□ -2.38
ARHGAP42-208	ENST00000534060	DST	Q03001	7570 aa	Known RBP	0.19	□□□□□ -2.38
ARHGAP42-208	ENST00000534060	DNAH14	Q0VDD8	3507 aa		0.19	□□□□□ -2.38
ARHGAP42-208	ENST00000534060	MT1B	P07438	61 aa		0.19	□□□□□ -2.38
ARHGAP42-208	ENST00000534060	MT1G	P13640	62 aa		0.19	□□□□□ -2.38
ARHGAP42-208	ENST00000534060	KRTAP6-1	Q3LI64	71 aa		0.19	□□□□□ -2.38
ARHGAP42-208	ENST00000534060	FAT4	Q6V0I7	4981 aa		0.18	□□□□□ -2.38
ARHGAP42-208	ENST00000534060	RYR1	P21817	5038 aa		0.18	□□□□□ -2.38
ARHGAP42-208	ENST00000534060	PCLO	Q9Y6V0	5065 aa		0.18	□□□□□ -2.38
ARHGAP42-208	ENST00000534060	MUC2	Q02817	5179 aa		0.18	□□□□□ -2.38
ARHGAP42-208	ENST00000534060	HERC2	O95714	4834 aa		0.17	□□□□□ -2.38
ARHGAP42-208	ENST00000534060	DNHD1	Q96M86	4753 aa		0.17	□□□□□ -2.38
ARHGAP42-208	ENST00000534060	MT1HL1	P0DM35	61 aa		0.17	□□□□□ -2.38
ARHGAP42-208	ENST00000534060	SYNE2	Q8WXH0	6885 aa	Known RBP	0.16	□□□□□ -2.38
ARHGAP42-208	ENST00000534060	CDH23	Q9H251	3354 aa		0.15	□□□□□ -2.38
ARHGAP42-208	ENST00000534060	FSIP2	Q5CZC0	6907 aa		0.15	□□□□□ -2.39
ARHGAP42-208	ENST00000534060	NEB	P20929	6669 aa		0.15	□□□□□ -2.39
ARHGAP42-208	ENST00000534060	MT1F	P04733	61 aa		0.14	□□□□□ -2.39
ARHGAP42-208	ENST00000534060	BIRC6	Q9NR09	4857 aa		0.14	□□□□□ -2.39
ARHGAP42-208	ENST00000534060	MUC12	Q9UKN1	5478 aa		0.13	□□□□□ -2.39
ARHGAP42-208	ENST00000534060	UBR4	Q5T4S7	5183 aa		0.12	□□□□□ -2.39
ARHGAP42-208	ENST00000534060	RYR3	Q15413	4870 aa		0.11	□□□□□ -2.39
ARHGAP42-208	ENST00000534060	RNF213	Q63HN8	5207 aa		0.1	□□□□□ -2.39
ARHGAP42-208	ENST00000534060	HYDIN	Q4G0P3	5121 aa		0.09	□□□□□ -2.39
ARHGAP42-208	ENST00000534060	KIAA1109	Q2LD37	5005 aa		0.05	□□□□□ -2.4
ARHGAP42-208	ENST00000534060	EPPK1	P58107	5090 aa	Known RBP	0.04	□□□□□ -2.4
ARHGAP42-208	ENST00000534060	RYR2	Q92736	4967 aa		0.04	□□□□□ -2.4
ARHGAP42-208	ENST00000534060	MT4	P47944	62 aa		0.04	□□□□□ -2.4
ARHGAP42-208	ENST00000534060	KRTAP20-1	Q3LI63	56 aa		0.02	□□□□□ -2.41
ARHGAP42-208	ENST00000534060	ABCA13	Q86UQ4	5058 aa		0.02	□□□□□ -2.41
ARHGAP42-208	ENST00000534060	KRTAP20-2	Q3LI61	65 aa		-0.01	□□□□□ -2.41
ARHGAP42-208	ENST00000534060	KRTAP19-6	Q3LI70	58 aa		-0.06	□□□□□ -2.42

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