RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 CAMK2N1Q7Z7J9 78 aa2.82□□□□□ -1.96
RNPC3-209ENST00000533834 KRTAP10-12P60413 245 aa2.81□□□□□ -1.96
RNPC3-209ENST00000533834 KRTAP5-1Q6L8H4 278 aa2.81□□□□□ -1.96
RNPC3-209ENST00000533834 KRTAP10-10P60014 251 aa2.79□□□□□ -1.96
RNPC3-209ENST00000533834 KMT2DO14686 5537 aa2.77□□□□□ -1.97
RNPC3-209ENST00000533834 OBSCNQ5VST9 7968 aa2.75□□□□□ -1.97
RNPC3-209ENST00000533834 A0A0A0MQY5 61 aa2.73□□□□□ -1.97
RNPC3-209ENST00000533834 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
RNPC3-209ENST00000533834 KRTAP5-9P26371 169 aa2.72□□□□□ -1.97
RNPC3-209ENST00000533834 M0R2T5 61 aa2.68□□□□□ -1.98
RNPC3-209ENST00000533834 KRTAP5-4Q6L8H1 288 aa2.68□□□□□ -1.98
RNPC3-209ENST00000533834 KRTAP19-7Q3SYF9 63 aa2.67□□□□□ -1.98
RNPC3-209ENST00000533834 KRTAP12-3P60328 96 aa2.66□□□□□ -1.98
RNPC3-209ENST00000533834 KRTAP9-6A8MVA2 160 aa2.64□□□□□ -1.99
RNPC3-209ENST00000533834 KRTAP19-5Q3LI72 72 aa2.64□□□□□ -1.99
RNPC3-209ENST00000533834 LCE3CQ5T5A8 94 aa2.58□□□□□ -2
RNPC3-209ENST00000533834 KRTAP19-6Q3LI70 58 aa2.58□□□□□ -2
RNPC3-209ENST00000533834 HMCN1Q96RW7 5635 aa2.56□□□□□ -2
RNPC3-209ENST00000533834 MT1EP04732 61 aa2.54□□□□□ -2
RNPC3-209ENST00000533834 PRO2289Q9P1D8 64 aa2.54□□□□□ -2
RNPC3-209ENST00000533834 MT1LQ93083 61 aa2.53□□□□□ -2
RNPC3-209ENST00000533834 KRTAP2-3P0C7H8 128 aa2.52□□□□□ -2.01
RNPC3-209ENST00000533834 LCE1EQ5T753 118 aa2.52□□□□□ -2.01
RNPC3-209ENST00000533834 KRTAP2-4Q9BYR9 128 aa2.52□□□□□ -2.01
RNPC3-209ENST00000533834 KRTAP2-1Q9BYU5 128 aa2.52□□□□□ -2.01
RNPC3-209ENST00000533834 FCGBPQ9Y6R7 5405 aaPredicted RBP2.51□□□□□ -2.01
RNPC3-209ENST00000533834 LUZP6Q538Z0 58 aa2.49□□□□□ -2.01
RNPC3-209ENST00000533834 LCE1AQ5T7P2 110 aa2.47□□□□□ -2.01
RNPC3-209ENST00000533834 KRTAP2-2Q9BYT5 123 aa2.47□□□□□ -2.01
RNPC3-209ENST00000533834 MUC12Q9UKN1 5478 aa2.4□□□□□ -2.03
RNPC3-209ENST00000533834 KRTAP4-3Q9BYR4 195 aa2.37□□□□□ -2.03
RNPC3-209ENST00000533834 MT1MQ8N339 61 aa2.36□□□□□ -2.03
RNPC3-209ENST00000533834 MUC5BQ9HC84 5762 aaPredicted RBP2.34□□□□□ -2.04
RNPC3-209ENST00000533834 INE1O15225 51 aa2.34□□□□□ -2.04
RNPC3-209ENST00000533834 KRTAP19-3Q7Z4W3 81 aa2.33□□□□□ -2.04
RNPC3-209ENST00000533834 KRTAP5-2Q701N4 177 aa2.32□□□□□ -2.04
RNPC3-209ENST00000533834 MACF1Q9UPN3 7388 aaKnown RBP2.31□□□□□ -2.04
RNPC3-209ENST00000533834 FSIP2Q5CZC0 6907 aa2.3□□□□□ -2.04
RNPC3-209ENST00000533834 MT1GP13640 62 aa2.29□□□□□ -2.04
RNPC3-209ENST00000533834 KRTAP5-5Q701N2 237 aaPredicted RBP2.28□□□□□ -2.04
RNPC3-209ENST00000533834 MDN1Q9NU22 5596 aa2.24□□□□□ -2.05
RNPC3-209ENST00000533834 SYNE2Q8WXH0 6885 aaKnown RBP2.18□□□□□ -2.06
RNPC3-209ENST00000533834 KRTAP6-1Q3LI64 71 aa2.14□□□□□ -2.07
RNPC3-209ENST00000533834 MT1AP04731 61 aa2.13□□□□□ -2.07
RNPC3-209ENST00000533834 SPRR2FQ96RM1 72 aa2.12□□□□□ -2.07
RNPC3-209ENST00000533834 DSTQ03001 7570 aaKnown RBP2.1□□□□□ -2.07
RNPC3-209ENST00000533834 CRCT1Q9UGL9 99 aa2.05□□□□□ -2.08
RNPC3-209ENST00000533834 KRTAP12-4P60329 112 aa1.99□□□□□ -2.09
RNPC3-209ENST00000533834 KRTAP6-3Q3LI67 103 aa1.98□□□□□ -2.09
RNPC3-209ENST00000533834 KRTAP5-8O75690 187 aa1.94□□□□□ -2.1
RNPC3-209ENST00000533834 SPRR2EP22531 72 aa1.94□□□□□ -2.1
RNPC3-209ENST00000533834 SPRR2BP35325 72 aa1.94□□□□□ -2.1
RNPC3-209ENST00000533834 SPRR2AP35326 72 aa1.94□□□□□ -2.1
RNPC3-209ENST00000533834 SYNE1Q8NF91 8797 aaKnown RBP1.94□□□□□ -2.1
RNPC3-209ENST00000533834 NEBP20929 6669 aa1.9□□□□□ -2.11
RNPC3-209ENST00000533834 LCE3DQ9BYE3 92 aa1.88□□□□□ -2.11
RNPC3-209ENST00000533834 KRTAP6-2Q3LI66 62 aa1.87□□□□□ -2.11
RNPC3-209ENST00000533834 SPRR2DP22532 72 aa1.86□□□□□ -2.11
RNPC3-209ENST00000533834 LCE3EQ5T5B0 92 aa1.86□□□□□ -2.11
RNPC3-209ENST00000533834 MT3P25713 68 aa1.78□□□□□ -2.12
RNPC3-209ENST00000533834 PRM1P04553 51 aa1.77□□□□□ -2.13
RNPC3-209ENST00000533834 KRTAP20-2Q3LI61 65 aa1.77□□□□□ -2.13
RNPC3-209ENST00000533834 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
RNPC3-209ENST00000533834 LCE1FQ5T754 118 aa1.73□□□□□ -2.13
RNPC3-209ENST00000533834 GPR98Q8WXG9 6306 aa1.72□□□□□ -2.13
RNPC3-209ENST00000533834 KRTAP20-1Q3LI63 56 aa1.71□□□□□ -2.14
RNPC3-209ENST00000533834 MUC5ACP98088 5654 aa1.66□□□□□ -2.14
RNPC3-209ENST00000533834 KRTAP5-10Q6L8G5 202 aa1.65□□□□□ -2.15
RNPC3-209ENST00000533834 LCE1CQ5T751 118 aa1.6□□□□□ -2.15
RNPC3-209ENST00000533834 LCE1BQ5T7P3 118 aa1.6□□□□□ -2.15
RNPC3-209ENST00000533834 MT4P47944 62 aa1.6□□□□□ -2.15
RNPC3-209ENST00000533834 KRTAP5-7Q6L8G8 165 aa1.55□□□□□ -2.16
RNPC3-209ENST00000533834 KRTAP21-2Q3LI59 83 aa1.47□□□□□ -2.17
RNPC3-209ENST00000533834 AHNAKQ09666 5890 aaKnown RBP1.43□□□□□ -2.18
RNPC3-209ENST00000533834 AHNAK2Q8IVF2 5795 aa1.42□□□□□ -2.18
RNPC3-209ENST00000533834 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
RNPC3-209ENST00000533834 PHGR1C9JFL3 82 aa1.16□□□□□ -2.22
RNPC3-209ENST00000533834 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 37.8 ms