RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 PRO2289Q9P1D8 64 aa3.26□□□□□ -1.89
CASP4-212ENST00000533730 SERP1Q9Y6X1 66 aa3.25□□□□□ -1.89
CASP4-212ENST00000533730 FCGBPQ9Y6R7 5405 aaPredicted RBP3.22□□□□□ -1.89
CASP4-212ENST00000533730 LCE3AQ5TA76 89 aa3.21□□□□□ -1.9
CASP4-212ENST00000533730 A0A1B0GU69 56 aa3.18□□□□□ -1.9
CASP4-212ENST00000533730 MT1XP80297 61 aa3.17□□□□□ -1.9
CASP4-212ENST00000533730 KRTAP5-9P26371 169 aa3.16□□□□□ -1.9
CASP4-212ENST00000533730 KRTAP13-4Q3LI77 160 aa3.16□□□□□ -1.9
CASP4-212ENST00000533730 PRR15LQ9BU68 103 aa3.15□□□□□ -1.91
CASP4-212ENST00000533730 OBSCNQ5VST9 7968 aa3.14□□□□□ -1.91
CASP4-212ENST00000533730 KRTAP6-3Q3LI67 103 aa3.13□□□□□ -1.91
CASP4-212ENST00000533730 SPATA8Q6RVD6 105 aa3.11□□□□□ -1.91
CASP4-212ENST00000533730 LCE3DQ9BYE3 92 aa3.11□□□□□ -1.91
CASP4-212ENST00000533730 LINC01558Q9Y6Z2 57 aa3.11□□□□□ -1.91
CASP4-212ENST00000533730 A0A0D9SG42 100 aa3.1□□□□□ -1.91
CASP4-212ENST00000533730 BRK1Q8WUW1 75 aa3.05□□□□□ -1.92
CASP4-212ENST00000533730 UQCR11O14957 56 aa3.04□□□□□ -1.92
CASP4-212ENST00000533730 KRTAP12-1P59990 96 aa3.04□□□□□ -1.92
CASP4-212ENST00000533730 ROMO1P60602 79 aa3.04□□□□□ -1.92
CASP4-212ENST00000533730 Q1T7F1 81 aa3.04□□□□□ -1.92
CASP4-212ENST00000533730 KRTAP5-5Q701N2 237 aaPredicted RBP3.03□□□□□ -1.92
CASP4-212ENST00000533730 KRTAP8-1Q8IUC2 63 aa3.02□□□□□ -1.93
CASP4-212ENST00000533730 MACF1Q9UPN3 7388 aaKnown RBP3.01□□□□□ -1.93
CASP4-212ENST00000533730 KRTAP4-3Q9BYR4 195 aa3□□□□□ -1.93
CASP4-212ENST00000533730 SPRR2FQ96RM1 72 aa2.97□□□□□ -1.93
CASP4-212ENST00000533730 MIR22HGQ0VDD5 57 aa2.96□□□□□ -1.94
CASP4-212ENST00000533730 TNP1P09430 55 aa2.9□□□□□ -1.95
CASP4-212ENST00000533730 SPRR2EP22531 72 aa2.9□□□□□ -1.95
CASP4-212ENST00000533730 SPRR2BP35325 72 aa2.9□□□□□ -1.95
CASP4-212ENST00000533730 SPRR2AP35326 72 aa2.9□□□□□ -1.95
CASP4-212ENST00000533730 SYNE2Q8WXH0 6885 aaKnown RBP2.89□□□□□ -1.95
CASP4-212ENST00000533730 C10orf95Q9H7T3 257 aa2.88□□□□□ -1.95
CASP4-212ENST00000533730 KMT2DO14686 5537 aa2.86□□□□□ -1.95
CASP4-212ENST00000533730 KRTAP20-1Q3LI63 56 aa2.84□□□□□ -1.95
CASP4-212ENST00000533730 CDC42SE1Q9NRR8 79 aa2.83□□□□□ -1.96
CASP4-212ENST00000533730 KRTAP19-7Q3SYF9 63 aa2.82□□□□□ -1.96
CASP4-212ENST00000533730 KRTAP2-3P0C7H8 128 aa2.81□□□□□ -1.96
CASP4-212ENST00000533730 SPRR2DP22532 72 aa2.81□□□□□ -1.96
CASP4-212ENST00000533730 KRTAP2-4Q9BYR9 128 aa2.81□□□□□ -1.96
CASP4-212ENST00000533730 MUC12Q9UKN1 5478 aa2.8□□□□□ -1.96
CASP4-212ENST00000533730 MT1EP04732 61 aa2.8□□□□□ -1.96
CASP4-212ENST00000533730 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
CASP4-212ENST00000533730 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
CASP4-212ENST00000533730 KRTAP19-5Q3LI72 72 aa2.79□□□□□ -1.96
CASP4-212ENST00000533730 PP632Q6XCG6 107 aa2.79□□□□□ -1.96
CASP4-212ENST00000533730 KRTAP19-3Q7Z4W3 81 aa2.76□□□□□ -1.97
CASP4-212ENST00000533730 MDN1Q9NU22 5596 aa2.76□□□□□ -1.97
CASP4-212ENST00000533730 NEBP20929 6669 aa2.74□□□□□ -1.97
CASP4-212ENST00000533730 MT1GP13640 62 aa2.73□□□□□ -1.97
CASP4-212ENST00000533730 KRTAP2-1Q9BYU5 128 aa2.73□□□□□ -1.97
CASP4-212ENST00000533730 KRTAP12-3P60328 96 aa2.71□□□□□ -1.98
CASP4-212ENST00000533730 MT1LQ93083 61 aa2.71□□□□□ -1.98
CASP4-212ENST00000533730 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
CASP4-212ENST00000533730 MT1MQ8N339 61 aa2.66□□□□□ -1.98
CASP4-212ENST00000533730 INE1O15225 51 aa2.63□□□□□ -1.99
CASP4-212ENST00000533730 DSTQ03001 7570 aaKnown RBP2.47□□□□□ -2.01
CASP4-212ENST00000533730 MT4P47944 62 aa2.42□□□□□ -2.02
CASP4-212ENST00000533730 KRTAP12-4P60329 112 aa2.37□□□□□ -2.03
CASP4-212ENST00000533730 KRTAP5-7Q6L8G8 165 aa2.35□□□□□ -2.03
CASP4-212ENST00000533730 MT1AP04731 61 aa2.32□□□□□ -2.04
CASP4-212ENST00000533730 GPR98Q8WXG9 6306 aa2.31□□□□□ -2.04
CASP4-212ENST00000533730 KRTAP20-2Q3LI61 65 aa2.31□□□□□ -2.04
CASP4-212ENST00000533730 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
CASP4-212ENST00000533730 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
CASP4-212ENST00000533730 KRTAP6-1Q3LI64 71 aa2.26□□□□□ -2.05
CASP4-212ENST00000533730 KRTAP5-10Q6L8G5 202 aa2.2□□□□□ -2.06
CASP4-212ENST00000533730 SYNE1Q8NF91 8797 aaKnown RBP2.18□□□□□ -2.06
CASP4-212ENST00000533730 KRTAP5-8O75690 187 aa2.15□□□□□ -2.07
CASP4-212ENST00000533730 KRTAP6-2Q3LI66 62 aa2.15□□□□□ -2.07
CASP4-212ENST00000533730 AHNAK2Q8IVF2 5795 aa2.13□□□□□ -2.07
CASP4-212ENST00000533730 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
CASP4-212ENST00000533730 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
CASP4-212ENST00000533730 MUC5ACP98088 5654 aa1.74□□□□□ -2.13
CASP4-212ENST00000533730 MUC5BQ9HC84 5762 aaPredicted RBP1.74□□□□□ -2.13
CASP4-212ENST00000533730 PHGR1C9JFL3 82 aa1.37□□□□□ -2.19
CASP4-212ENST00000533730 PRM1P04553 51 aa1.37□□□□□ -2.19
CASP4-212ENST00000533730 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
CASP4-212ENST00000533730 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 43.5 ms