RNA–Protein interactions for RNA: ENST00000533678.1

RDX-214, Transcript of radixin, humanhuman

TSL 4

Gene RDX, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-214ENST00000533678 KRTAP25-1Q3LHN0 102 aa6.07□□□□□ -1.44
RDX-214ENST00000533678 DSTQ03001 7570 aaKnown RBP6.06□□□□□ -1.44
RDX-214ENST00000533678 LCE5AQ5TCM9 118 aa6.03□□□□□ -1.44
RDX-214ENST00000533678 KRTAP19-3Q7Z4W3 81 aa6.03□□□□□ -1.44
RDX-214ENST00000533678 KRTAP19-5Q3LI72 72 aa6.01□□□□□ -1.45
RDX-214ENST00000533678 LCE3AQ5TA76 89 aa6.01□□□□□ -1.45
RDX-214ENST00000533678 ROMO1P60602 79 aa6□□□□□ -1.45
RDX-214ENST00000533678 BRK1Q8WUW1 75 aa6□□□□□ -1.45
RDX-214ENST00000533678 KRTAP4-9Q9BYQ8 210 aa6□□□□□ -1.45
RDX-214ENST00000533678 MT1GP13640 62 aa5.93□□□□□ -1.46
RDX-214ENST00000533678 PP632Q6XCG6 107 aa5.9□□□□□ -1.46
RDX-214ENST00000533678 MT1LQ93083 61 aa5.83□□□□□ -1.48
RDX-214ENST00000533678 KRTAP12-3P60328 96 aa5.82□□□□□ -1.48
RDX-214ENST00000533678 LCE1DQ5T752 114 aa5.82□□□□□ -1.48
RDX-214ENST00000533678 KRTAP23-1A1A580 65 aa5.81□□□□□ -1.48
RDX-214ENST00000533678 MT1MQ8N339 61 aa5.79□□□□□ -1.48
RDX-214ENST00000533678 HMCN1Q96RW7 5635 aa5.74□□□□□ -1.49
RDX-214ENST00000533678 AHNAK2Q8IVF2 5795 aa5.71□□□□□ -1.5
RDX-214ENST00000533678 MT4P47944 62 aa5.7□□□□□ -1.5
RDX-214ENST00000533678 PMAIP1Q13794 54 aa5.67□□□□□ -1.5
RDX-214ENST00000533678 LCE4AQ5TA78 99 aa5.66□□□□□ -1.5
RDX-214ENST00000533678 KRTAP5-10Q6L8G5 202 aa5.66□□□□□ -1.5
RDX-214ENST00000533678 KRTAP4-3Q9BYR4 195 aa5.59□□□□□ -1.51
RDX-214ENST00000533678 KRTAP15-1Q3LI76 137 aa5.56□□□□□ -1.52
RDX-214ENST00000533678 KRTAP19-4Q3LI73 84 aa5.55□□□□□ -1.52
RDX-214ENST00000533678 PRO0628Q9UI54 55 aa5.53□□□□□ -1.52
RDX-214ENST00000533678 KRTAP4-7Q9BYR0 210 aa5.51□□□□□ -1.53
RDX-214ENST00000533678 KRTAP5-7Q6L8G8 165 aa5.5□□□□□ -1.53
RDX-214ENST00000533678 KRTAP5-4Q6L8H1 288 aa5.47□□□□□ -1.53
RDX-214ENST00000533678 KRTAP4-6Q9BYQ5 205 aa5.44□□□□□ -1.54
RDX-214ENST00000533678 KRTAP5-3Q6L8H2 238 aa5.41□□□□□ -1.54
RDX-214ENST00000533678 LCE3CQ5T5A8 94 aa5.38□□□□□ -1.55
RDX-214ENST00000533678 SPRR5A0A1B0GTR4 108 aa5.32□□□□□ -1.56
RDX-214ENST00000533678 KRTAP5-5Q701N2 237 aaPredicted RBP5.31□□□□□ -1.56
RDX-214ENST00000533678 PRAC1Q96KF2 57 aa5.28□□□□□ -1.56
RDX-214ENST00000533678 LOC100996750A0A140TA64 210 aa5.26□□□□□ -1.57
RDX-214ENST00000533678 KRTAP20-2Q3LI61 65 aa5.21□□□□□ -1.58
RDX-214ENST00000533678 KTN1-AS1Q86SY8 53 aa5.2□□□□□ -1.58
RDX-214ENST00000533678 KRTAP12-4P60329 112 aa5.18□□□□□ -1.58
RDX-214ENST00000533678 SVIPQ8NHG7 77 aa5.07□□□□□ -1.6
RDX-214ENST00000533678 SYNE1Q8NF91 8797 aaKnown RBP5.04□□□□□ -1.6
RDX-214ENST00000533678 MT1AP04731 61 aa4.99□□□□□ -1.61
RDX-214ENST00000533678 KRTAP9-6A8MVA2 160 aa4.94□□□□□ -1.62
RDX-214ENST00000533678 KRTAP6-1Q3LI64 71 aa4.92□□□□□ -1.62
RDX-214ENST00000533678 H3BS24 57 aa4.9□□□□□ -1.63
RDX-214ENST00000533678 AHNAKQ09666 5890 aaKnown RBP4.86□□□□□ -1.63
RDX-214ENST00000533678 KRTAP4-11Q9BYQ6 195 aa4.86□□□□□ -1.63
RDX-214ENST00000533678 MUC5ACP98088 5654 aa4.83□□□□□ -1.64
RDX-214ENST00000533678 KRTAP9-4Q9BYQ2 154 aa4.83□□□□□ -1.64
RDX-214ENST00000533678 KRTAP5-2Q701N4 177 aa4.81□□□□□ -1.64
RDX-214ENST00000533678 KRTAP5-8O75690 187 aa4.73□□□□□ -1.65
RDX-214ENST00000533678 MUC5BQ9HC84 5762 aaPredicted RBP4.73□□□□□ -1.65
RDX-214ENST00000533678 KRTAP6-2Q3LI66 62 aa4.68□□□□□ -1.66
RDX-214ENST00000533678 MT3P25713 68 aa4.58□□□□□ -1.68
RDX-214ENST00000533678 LUZP6Q538Z0 58 aa4.58□□□□□ -1.68
RDX-214ENST00000533678 KRTAP9-9Q9BYP9 154 aa4.57□□□□□ -1.68
RDX-214ENST00000533678 OBSCNQ5VST9 7968 aa4.47□□□□□ -1.69
RDX-214ENST00000533678 KRTAP5-1Q6L8H4 278 aa4.3□□□□□ -1.72
RDX-214ENST00000533678 KRTAP4-12Q9BQ66 201 aa4.3□□□□□ -1.72
RDX-214ENST00000533678 LCE1EQ5T753 118 aa4.2□□□□□ -1.74
RDX-214ENST00000533678 KRTAP4-2Q9BYR5 136 aa4.1□□□□□ -1.75
RDX-214ENST00000533678 LCE3DQ9BYE3 92 aa4□□□□□ -1.77
RDX-214ENST00000533678 NDUFAF8A1L188 74 aa3.96□□□□□ -1.78
RDX-214ENST00000533678 LCE1CQ5T751 118 aa3.88□□□□□ -1.79
RDX-214ENST00000533678 LCE1BQ5T7P3 118 aa3.88□□□□□ -1.79
RDX-214ENST00000533678 LCE3EQ5T5B0 92 aa3.82□□□□□ -1.8
RDX-214ENST00000533678 A0A0A0MQY5 61 aa3.65□□□□□ -1.83
RDX-214ENST00000533678 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
RDX-214ENST00000533678 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
RDX-214ENST00000533678 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
RDX-214ENST00000533678 PHGR1C9JFL3 82 aa3.34□□□□□ -1.87
RDX-214ENST00000533678 INE1O15225 51 aa3.27□□□□□ -1.89
RDX-214ENST00000533678 KRTAP21-2Q3LI59 83 aa3.25□□□□□ -1.89
RDX-214ENST00000533678 PRM1P04553 51 aa3.07□□□□□ -1.92
RDX-214ENST00000533678 KRTAP4-4Q9BYR3 166 aa2.91□□□□□ -1.94
RDX-214ENST00000533678 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
RDX-214ENST00000533678 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
RDX-214ENST00000533678 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 96.2 ms