RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 LINC01558Q9Y6Z2 57 aa3.46□□□□□ -1.86
COPB1-210ENST00000533533 GPR98Q8WXG9 6306 aa3.46□□□□□ -1.86
COPB1-210ENST00000533533 A8MU10 97 aa3.45□□□□□ -1.86
COPB1-210ENST00000533533 KRTAP10-12P60413 245 aa3.44□□□□□ -1.86
COPB1-210ENST00000533533 KRTAP12-1P59990 96 aa3.43□□□□□ -1.86
COPB1-210ENST00000533533 DSTQ03001 7570 aaKnown RBP3.39□□□□□ -1.87
COPB1-210ENST00000533533 UQCR11O14957 56 aa3.38□□□□□ -1.87
COPB1-210ENST00000533533 PCP4P48539 62 aa3.37□□□□□ -1.87
COPB1-210ENST00000533533 V9GYY9 64 aa3.36□□□□□ -1.87
COPB1-210ENST00000533533 PSPHP1O15172 72 aa3.35□□□□□ -1.87
COPB1-210ENST00000533533 MIR22HGQ0VDD5 57 aa3.33□□□□□ -1.88
COPB1-210ENST00000533533 Q1T7F1 81 aa3.31□□□□□ -1.88
COPB1-210ENST00000533533 KRTAP5-11Q6L8G4 156 aa3.28□□□□□ -1.88
COPB1-210ENST00000533533 K7ERS5 55 aa3.27□□□□□ -1.89
COPB1-210ENST00000533533 TNP1P09430 55 aa3.27□□□□□ -1.89
COPB1-210ENST00000533533 C10orf95Q9H7T3 257 aa3.27□□□□□ -1.89
COPB1-210ENST00000533533 A6NED7 52 aa3.25□□□□□ -1.89
COPB1-210ENST00000533533 RPS28P62857 69 aaKnown RBP3.24□□□□□ -1.89
COPB1-210ENST00000533533 KRTAP19-7Q3SYF9 63 aa3.24□□□□□ -1.89
COPB1-210ENST00000533533 KRTAP19-3Q7Z4W3 81 aa3.24□□□□□ -1.89
COPB1-210ENST00000533533 MT1EP04732 61 aa3.23□□□□□ -1.89
COPB1-210ENST00000533533 KRTAP5-4Q6L8H1 288 aa3.22□□□□□ -1.89
COPB1-210ENST00000533533 KRTAP19-5Q3LI72 72 aa3.2□□□□□ -1.9
COPB1-210ENST00000533533 LCE3AQ5TA76 89 aa3.2□□□□□ -1.9
COPB1-210ENST00000533533 HMCN1Q96RW7 5635 aa3.19□□□□□ -1.9
COPB1-210ENST00000533533 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
COPB1-210ENST00000533533 MT4P47944 62 aa3.16□□□□□ -1.9
COPB1-210ENST00000533533 KRTAP5-1Q6L8H4 278 aa3.16□□□□□ -1.9
COPB1-210ENST00000533533 MT1GP13640 62 aa3.14□□□□□ -1.91
COPB1-210ENST00000533533 AHNAK2Q8IVF2 5795 aa3.14□□□□□ -1.91
COPB1-210ENST00000533533 KRTAP25-1Q3LHN0 102 aa3.12□□□□□ -1.91
COPB1-210ENST00000533533 PP632Q6XCG6 107 aa3.12□□□□□ -1.91
COPB1-210ENST00000533533 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
COPB1-210ENST00000533533 KRTAP5-10Q6L8G5 202 aa3.11□□□□□ -1.91
COPB1-210ENST00000533533 MT3P25713 68 aa3.09□□□□□ -1.91
COPB1-210ENST00000533533 CDC42SE1Q9NRR8 79 aa3.09□□□□□ -1.91
COPB1-210ENST00000533533 MT1MQ8N339 61 aa3.08□□□□□ -1.92
COPB1-210ENST00000533533 A0A0A0MQY5 61 aa3.07□□□□□ -1.92
COPB1-210ENST00000533533 KRTAP12-3P60328 96 aa3.07□□□□□ -1.92
COPB1-210ENST00000533533 MT1LQ93083 61 aa3.07□□□□□ -1.92
COPB1-210ENST00000533533 ROMO1P60602 79 aa3.04□□□□□ -1.92
COPB1-210ENST00000533533 KRTAP5-7Q6L8G8 165 aa3.02□□□□□ -1.93
COPB1-210ENST00000533533 KRTAP4-3Q9BYR4 195 aa3.02□□□□□ -1.93
COPB1-210ENST00000533533 BRK1Q8WUW1 75 aa2.94□□□□□ -1.94
COPB1-210ENST00000533533 KRTAP20-2Q3LI61 65 aa2.91□□□□□ -1.94
COPB1-210ENST00000533533 SPRR5A0A1B0GTR4 108 aa2.88□□□□□ -1.95
COPB1-210ENST00000533533 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
COPB1-210ENST00000533533 KRTAP5-5Q701N2 237 aaPredicted RBP2.85□□□□□ -1.95
COPB1-210ENST00000533533 KRTAP12-4P60329 112 aa2.83□□□□□ -1.96
COPB1-210ENST00000533533 LCE3CQ5T5A8 94 aa2.83□□□□□ -1.96
COPB1-210ENST00000533533 SYNE1Q8NF91 8797 aaKnown RBP2.77□□□□□ -1.97
COPB1-210ENST00000533533 KRTAP9-6A8MVA2 160 aa2.77□□□□□ -1.97
COPB1-210ENST00000533533 PMAIP1Q13794 54 aa2.76□□□□□ -1.97
COPB1-210ENST00000533533 OBSCNQ5VST9 7968 aa2.7□□□□□ -1.98
COPB1-210ENST00000533533 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
COPB1-210ENST00000533533 AHNAKQ09666 5890 aaKnown RBP2.64□□□□□ -1.99
COPB1-210ENST00000533533 MUC5ACP98088 5654 aa2.64□□□□□ -1.99
COPB1-210ENST00000533533 PRAC1Q96KF2 57 aa2.63□□□□□ -1.99
COPB1-210ENST00000533533 MUC5BQ9HC84 5762 aaPredicted RBP2.63□□□□□ -1.99
COPB1-210ENST00000533533 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
COPB1-210ENST00000533533 PRO0628Q9UI54 55 aa2.62□□□□□ -1.99
COPB1-210ENST00000533533 MT1AP04731 61 aa2.61□□□□□ -1.99
COPB1-210ENST00000533533 KRTAP6-1Q3LI64 71 aa2.6□□□□□ -1.99
COPB1-210ENST00000533533 NDUFAF8A1L188 74 aa2.57□□□□□ -2
COPB1-210ENST00000533533 KRTAP6-2Q3LI66 62 aa2.52□□□□□ -2.01
COPB1-210ENST00000533533 KTN1-AS1Q86SY8 53 aa2.49□□□□□ -2.01
COPB1-210ENST00000533533 LCE3EQ5T5B0 92 aa2.3□□□□□ -2.04
COPB1-210ENST00000533533 LUZP6Q538Z0 58 aa2.23□□□□□ -2.05
COPB1-210ENST00000533533 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
COPB1-210ENST00000533533 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
COPB1-210ENST00000533533 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
COPB1-210ENST00000533533 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
COPB1-210ENST00000533533 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
COPB1-210ENST00000533533 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
COPB1-210ENST00000533533 PRM1P04553 51 aa1.57□□□□□ -2.16
COPB1-210ENST00000533533 INE1O15225 51 aa1.51□□□□□ -2.17
COPB1-210ENST00000533533 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
COPB1-210ENST00000533533 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 134.4 ms