RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 C10orf95Q9H7T3 257 aa4.33□□□□□ -1.72
CLCF1-202ENST00000533438 DSTQ03001 7570 aaKnown RBP4.27□□□□□ -1.73
CLCF1-202ENST00000533438 KRTAP19-7Q3SYF9 63 aa4.26□□□□□ -1.73
CLCF1-202ENST00000533438 TNP1P09430 55 aa4.24□□□□□ -1.73
CLCF1-202ENST00000533438 ROMO1P60602 79 aa4.24□□□□□ -1.73
CLCF1-202ENST00000533438 LCE5AQ5TCM9 118 aa4.24□□□□□ -1.73
CLCF1-202ENST00000533438 KRTAP4-9Q9BYQ8 210 aa4.23□□□□□ -1.73
CLCF1-202ENST00000533438 H3BS24 57 aa4.22□□□□□ -1.73
CLCF1-202ENST00000533438 MT1EP04732 61 aa4.22□□□□□ -1.73
CLCF1-202ENST00000533438 KRTAP25-1Q3LHN0 102 aa4.21□□□□□ -1.74
CLCF1-202ENST00000533438 KRTAP19-3Q7Z4W3 81 aa4.21□□□□□ -1.74
CLCF1-202ENST00000533438 LCE1DQ5T752 114 aa4.12□□□□□ -1.75
CLCF1-202ENST00000533438 KRTAP19-5Q3LI72 72 aa4.11□□□□□ -1.75
CLCF1-202ENST00000533438 HMCN1Q96RW7 5635 aa4.1□□□□□ -1.75
CLCF1-202ENST00000533438 KRTAP23-1A1A580 65 aa4.1□□□□□ -1.75
CLCF1-202ENST00000533438 MT1GP13640 62 aa4.09□□□□□ -1.75
CLCF1-202ENST00000533438 LCE3AQ5TA76 89 aa4.09□□□□□ -1.75
CLCF1-202ENST00000533438 LCE4AQ5TA78 99 aa4.07□□□□□ -1.76
CLCF1-202ENST00000533438 KRTAP5-10Q6L8G5 202 aa4.06□□□□□ -1.76
CLCF1-202ENST00000533438 A0A0A0MQY5 61 aa4.04□□□□□ -1.76
CLCF1-202ENST00000533438 PP632Q6XCG6 107 aa4.04□□□□□ -1.76
CLCF1-202ENST00000533438 MT1MQ8N339 61 aa4.03□□□□□ -1.76
CLCF1-202ENST00000533438 MT1LQ93083 61 aa4.03□□□□□ -1.76
CLCF1-202ENST00000533438 PRAC1Q96KF2 57 aa4.01□□□□□ -1.77
CLCF1-202ENST00000533438 AHNAK2Q8IVF2 5795 aa4□□□□□ -1.77
CLCF1-202ENST00000533438 KRTAP5-4Q6L8H1 288 aa3.99□□□□□ -1.77
CLCF1-202ENST00000533438 MT4P47944 62 aa3.96□□□□□ -1.78
CLCF1-202ENST00000533438 KRTAP5-7Q6L8G8 165 aa3.95□□□□□ -1.78
CLCF1-202ENST00000533438 KRTAP12-3P60328 96 aa3.94□□□□□ -1.78
CLCF1-202ENST00000533438 KRTAP4-3Q9BYR4 195 aa3.93□□□□□ -1.78
CLCF1-202ENST00000533438 KRTAP4-6Q9BYQ5 205 aa3.9□□□□□ -1.79
CLCF1-202ENST00000533438 KRTAP5-3Q6L8H2 238 aa3.86□□□□□ -1.79
CLCF1-202ENST00000533438 KRTAP15-1Q3LI76 137 aa3.82□□□□□ -1.8
CLCF1-202ENST00000533438 KRTAP4-7Q9BYR0 210 aa3.81□□□□□ -1.8
CLCF1-202ENST00000533438 KRTAP19-4Q3LI73 84 aa3.77□□□□□ -1.81
CLCF1-202ENST00000533438 SPRR5A0A1B0GTR4 108 aa3.72□□□□□ -1.81
CLCF1-202ENST00000533438 KRTAP20-2Q3LI61 65 aa3.72□□□□□ -1.81
CLCF1-202ENST00000533438 KRTAP5-5Q701N2 237 aaPredicted RBP3.72□□□□□ -1.81
CLCF1-202ENST00000533438 LCE3CQ5T5A8 94 aa3.67□□□□□ -1.82
CLCF1-202ENST00000533438 LOC100996750A0A140TA64 210 aa3.62□□□□□ -1.83
CLCF1-202ENST00000533438 KRTAP12-4P60329 112 aa3.6□□□□□ -1.83
CLCF1-202ENST00000533438 SYNE1Q8NF91 8797 aaKnown RBP3.57□□□□□ -1.84
CLCF1-202ENST00000533438 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
CLCF1-202ENST00000533438 KRTAP4-11Q9BYQ6 195 aa3.49□□□□□ -1.85
CLCF1-202ENST00000533438 KRTAP9-6A8MVA2 160 aa3.45□□□□□ -1.86
CLCF1-202ENST00000533438 KRTAP5-2Q701N4 177 aa3.43□□□□□ -1.86
CLCF1-202ENST00000533438 AHNAKQ09666 5890 aaKnown RBP3.42□□□□□ -1.86
CLCF1-202ENST00000533438 MUC5ACP98088 5654 aa3.42□□□□□ -1.86
CLCF1-202ENST00000533438 MT1AP04731 61 aa3.42□□□□□ -1.86
CLCF1-202ENST00000533438 KRTAP6-1Q3LI64 71 aa3.41□□□□□ -1.86
CLCF1-202ENST00000533438 LUZP6Q538Z0 58 aa3.41□□□□□ -1.86
CLCF1-202ENST00000533438 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
CLCF1-202ENST00000533438 MUC5BQ9HC84 5762 aaPredicted RBP3.39□□□□□ -1.87
CLCF1-202ENST00000533438 KRTAP9-4Q9BYQ2 154 aa3.31□□□□□ -1.88
CLCF1-202ENST00000533438 KRTAP6-2Q3LI66 62 aa3.26□□□□□ -1.89
CLCF1-202ENST00000533438 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
CLCF1-202ENST00000533438 KRTAP9-9Q9BYP9 154 aa3.24□□□□□ -1.89
CLCF1-202ENST00000533438 KRTAP5-1Q6L8H4 278 aa3.13□□□□□ -1.91
CLCF1-202ENST00000533438 MT3P25713 68 aa3.12□□□□□ -1.91
CLCF1-202ENST00000533438 INE1O15225 51 aa3.04□□□□□ -1.92
CLCF1-202ENST00000533438 LCE1EQ5T753 118 aa2.91□□□□□ -1.94
CLCF1-202ENST00000533438 KRTAP4-2Q9BYR5 136 aa2.76□□□□□ -1.97
CLCF1-202ENST00000533438 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
CLCF1-202ENST00000533438 LCE1BQ5T7P3 118 aa2.71□□□□□ -1.98
CLCF1-202ENST00000533438 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
CLCF1-202ENST00000533438 LCE3EQ5T5B0 92 aa2.63□□□□□ -1.99
CLCF1-202ENST00000533438 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
CLCF1-202ENST00000533438 KRTAP4-12Q9BQ66 201 aa2.51□□□□□ -2.01
CLCF1-202ENST00000533438 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
CLCF1-202ENST00000533438 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
CLCF1-202ENST00000533438 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
CLCF1-202ENST00000533438 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
CLCF1-202ENST00000533438 PRM1P04553 51 aa2.19□□□□□ -2.06
CLCF1-202ENST00000533438 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
CLCF1-202ENST00000533438 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
CLCF1-202ENST00000533438 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
CLCF1-202ENST00000533438 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 111.5 ms