RNA–Protein interactions for RNA: ENST00000533411.5

SOX6-215, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-215ENST00000533411 KRTAP19-8Q3LI54 63 aa3.01□□□□□ -1.93
SOX6-215ENST00000533411 C10orf95Q9H7T3 257 aa3□□□□□ -1.93
SOX6-215ENST00000533411 MACF1Q9UPN3 7388 aaKnown RBP2.99□□□□□ -1.93
SOX6-215ENST00000533411 KRTAP6-3Q3LI67 103 aa2.95□□□□□ -1.94
SOX6-215ENST00000533411 TNP1P09430 55 aa2.94□□□□□ -1.94
SOX6-215ENST00000533411 LCE1AQ5T7P2 110 aa2.94□□□□□ -1.94
SOX6-215ENST00000533411 KRTAP10-5P60370 271 aa2.93□□□□□ -1.94
SOX6-215ENST00000533411 SYNE2Q8WXH0 6885 aaKnown RBP2.93□□□□□ -1.94
SOX6-215ENST00000533411 PP632Q6XCG6 107 aa2.91□□□□□ -1.94
SOX6-215ENST00000533411 PRO2289Q9P1D8 64 aa2.9□□□□□ -1.95
SOX6-215ENST00000533411 MT1XP80297 61 aa2.87□□□□□ -1.95
SOX6-215ENST00000533411 KRTAP2-2Q9BYT5 123 aa2.83□□□□□ -1.96
SOX6-215ENST00000533411 MUC12Q9UKN1 5478 aa2.82□□□□□ -1.96
SOX6-215ENST00000533411 KRTAP5-9P26371 169 aa2.81□□□□□ -1.96
SOX6-215ENST00000533411 KRTAP10-12P60413 245 aa2.8□□□□□ -1.96
SOX6-215ENST00000533411 NEBP20929 6669 aa2.79□□□□□ -1.96
SOX6-215ENST00000533411 LCE1EQ5T753 118 aa2.79□□□□□ -1.96
SOX6-215ENST00000533411 KMT2DO14686 5537 aa2.78□□□□□ -1.97
SOX6-215ENST00000533411 LCE3AQ5TA76 89 aa2.77□□□□□ -1.97
SOX6-215ENST00000533411 MDN1Q9NU22 5596 aa2.76□□□□□ -1.97
SOX6-215ENST00000533411 KRTAP20-1Q3LI63 56 aa2.75□□□□□ -1.97
SOX6-215ENST00000533411 SPRR2FQ96RM1 72 aa2.75□□□□□ -1.97
SOX6-215ENST00000533411 KRTAP8-1Q8IUC2 63 aa2.72□□□□□ -1.97
SOX6-215ENST00000533411 SPRR2EP22531 72 aa2.71□□□□□ -1.98
SOX6-215ENST00000533411 SPRR2BP35325 72 aa2.71□□□□□ -1.98
SOX6-215ENST00000533411 SPRR2AP35326 72 aa2.71□□□□□ -1.98
SOX6-215ENST00000533411 MT3P25713 68 aa2.69□□□□□ -1.98
SOX6-215ENST00000533411 KRTAP5-1Q6L8H4 278 aa2.69□□□□□ -1.98
SOX6-215ENST00000533411 KRTAP12-3P60328 96 aa2.67□□□□□ -1.98
SOX6-215ENST00000533411 KRTAP2-3P0C7H8 128 aa2.66□□□□□ -1.98
SOX6-215ENST00000533411 KRTAP2-4Q9BYR9 128 aa2.66□□□□□ -1.98
SOX6-215ENST00000533411 SPRR2DP22532 72 aa2.62□□□□□ -1.99
SOX6-215ENST00000533411 KRTAP19-5Q3LI72 72 aa2.62□□□□□ -1.99
SOX6-215ENST00000533411 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
SOX6-215ENST00000533411 KRTAP5-4Q6L8H1 288 aa2.57□□□□□ -2
SOX6-215ENST00000533411 KRTAP2-1Q9BYU5 128 aa2.57□□□□□ -2
SOX6-215ENST00000533411 SPRR5A0A1B0GTR4 108 aa2.56□□□□□ -2
SOX6-215ENST00000533411 KRTAP19-7Q3SYF9 63 aa2.55□□□□□ -2
SOX6-215ENST00000533411 MT1EP04732 61 aa2.52□□□□□ -2.01
SOX6-215ENST00000533411 LCE3CQ5T5A8 94 aa2.48□□□□□ -2.01
SOX6-215ENST00000533411 MT1LQ93083 61 aa2.48□□□□□ -2.01
SOX6-215ENST00000533411 KRTAP19-3Q7Z4W3 81 aa2.46□□□□□ -2.02
SOX6-215ENST00000533411 KRTAP9-6A8MVA2 160 aa2.43□□□□□ -2.02
SOX6-215ENST00000533411 MT1GP13640 62 aa2.39□□□□□ -2.03
SOX6-215ENST00000533411 DSTQ03001 7570 aaKnown RBP2.38□□□□□ -2.03
SOX6-215ENST00000533411 MT1MQ8N339 61 aa2.38□□□□□ -2.03
SOX6-215ENST00000533411 LCE1FQ5T754 118 aa2.36□□□□□ -2.03
SOX6-215ENST00000533411 KRTAP4-3Q9BYR4 195 aa2.35□□□□□ -2.03
SOX6-215ENST00000533411 INE1O15225 51 aa2.34□□□□□ -2.03
SOX6-215ENST00000533411 MT4P47944 62 aa2.3□□□□□ -2.04
SOX6-215ENST00000533411 GPR98Q8WXG9 6306 aa2.27□□□□□ -2.05
SOX6-215ENST00000533411 OBSCNQ5VST9 7968 aa2.27□□□□□ -2.05
SOX6-215ENST00000533411 HMCN1Q96RW7 5635 aa2.25□□□□□ -2.05
SOX6-215ENST00000533411 AHNAK2Q8IVF2 5795 aa2.21□□□□□ -2.06
SOX6-215ENST00000533411 KRTAP5-5Q701N2 237 aaPredicted RBP2.17□□□□□ -2.06
SOX6-215ENST00000533411 KRTAP5-10Q6L8G5 202 aa2.15□□□□□ -2.07
SOX6-215ENST00000533411 KRTAP20-2Q3LI61 65 aa2.14□□□□□ -2.07
SOX6-215ENST00000533411 KRTAP5-2Q701N4 177 aa2.14□□□□□ -2.07
SOX6-215ENST00000533411 MT1AP04731 61 aa2.13□□□□□ -2.07
SOX6-215ENST00000533411 SYNE1Q8NF91 8797 aaKnown RBP2.11□□□□□ -2.07
SOX6-215ENST00000533411 KRTAP12-4P60329 112 aa2.09□□□□□ -2.07
SOX6-215ENST00000533411 KRTAP6-1Q3LI64 71 aa2.08□□□□□ -2.08
SOX6-215ENST00000533411 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
SOX6-215ENST00000533411 LCE3EQ5T5B0 92 aa2.02□□□□□ -2.09
SOX6-215ENST00000533411 KRTAP6-2Q3LI66 62 aa1.93□□□□□ -2.1
SOX6-215ENST00000533411 KRTAP5-8O75690 187 aa1.89□□□□□ -2.11
SOX6-215ENST00000533411 LCE3DQ9BYE3 92 aa1.88□□□□□ -2.11
SOX6-215ENST00000533411 LCE1CQ5T751 118 aa1.8□□□□□ -2.12
SOX6-215ENST00000533411 LCE1BQ5T7P3 118 aa1.8□□□□□ -2.12
SOX6-215ENST00000533411 MUC5ACP98088 5654 aa1.79□□□□□ -2.12
SOX6-215ENST00000533411 AHNAKQ09666 5890 aaKnown RBP1.79□□□□□ -2.12
SOX6-215ENST00000533411 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
SOX6-215ENST00000533411 PRM1P04553 51 aa1.64□□□□□ -2.15
SOX6-215ENST00000533411 MUC19Q7Z5P9 8384 aa1.45□□□□□ -2.18
SOX6-215ENST00000533411 KRTAP21-2Q3LI59 83 aa1.34□□□□□ -2.19
SOX6-215ENST00000533411 PHGR1C9JFL3 82 aa1.25□□□□□ -2.21
SOX6-215ENST00000533411 KRTAP21-1Q3LI58 79 aa1□□□□□ -2.25
SOX6-215ENST00000533411 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 60.3 ms