RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 C10orf95Q9H7T3 257 aa5.02□□□□□ -1.61
TRAPPC4-212ENST00000533058 TNP1P09430 55 aa4.99□□□□□ -1.61
TRAPPC4-212ENST00000533058 CDC42SE1Q9NRR8 79 aa4.98□□□□□ -1.61
TRAPPC4-212ENST00000533058 SPRR2DP22532 72 aa4.96□□□□□ -1.62
TRAPPC4-212ENST00000533058 PRO0628Q9UI54 55 aa4.96□□□□□ -1.62
TRAPPC4-212ENST00000533058 KRTAP9-9Q9BYP9 154 aa4.94□□□□□ -1.62
TRAPPC4-212ENST00000533058 KRTAP9-4Q9BYQ2 154 aa4.94□□□□□ -1.62
TRAPPC4-212ENST00000533058 KRTAP2-2Q9BYT5 123 aa4.94□□□□□ -1.62
TRAPPC4-212ENST00000533058 KRTAP2-1Q9BYU5 128 aa4.94□□□□□ -1.62
TRAPPC4-212ENST00000533058 BRK1Q8WUW1 75 aa4.93□□□□□ -1.62
TRAPPC4-212ENST00000533058 KRTAP25-1Q3LHN0 102 aa4.85□□□□□ -1.63
TRAPPC4-212ENST00000533058 KRTAP19-7Q3SYF9 63 aa4.85□□□□□ -1.63
TRAPPC4-212ENST00000533058 LCE3AQ5TA76 89 aa4.84□□□□□ -1.63
TRAPPC4-212ENST00000533058 LCE4AQ5TA78 99 aa4.83□□□□□ -1.64
TRAPPC4-212ENST00000533058 MT1EP04732 61 aa4.81□□□□□ -1.64
TRAPPC4-212ENST00000533058 ROMO1P60602 79 aa4.8□□□□□ -1.64
TRAPPC4-212ENST00000533058 KRTAP19-5Q3LI72 72 aa4.79□□□□□ -1.64
TRAPPC4-212ENST00000533058 LCE5AQ5TCM9 118 aa4.79□□□□□ -1.64
TRAPPC4-212ENST00000533058 KRTAP19-3Q7Z4W3 81 aa4.76□□□□□ -1.65
TRAPPC4-212ENST00000533058 LCE1DQ5T752 114 aa4.75□□□□□ -1.65
TRAPPC4-212ENST00000533058 KRTAP4-7Q9BYR0 210 aa4.74□□□□□ -1.65
TRAPPC4-212ENST00000533058 NDUFAF8A1L188 74 aa4.71□□□□□ -1.66
TRAPPC4-212ENST00000533058 MT1GP13640 62 aa4.68□□□□□ -1.66
TRAPPC4-212ENST00000533058 PMAIP1Q13794 54 aa4.68□□□□□ -1.66
TRAPPC4-212ENST00000533058 KRTAP12-3P60328 96 aa4.66□□□□□ -1.66
TRAPPC4-212ENST00000533058 PP632Q6XCG6 107 aa4.63□□□□□ -1.67
TRAPPC4-212ENST00000533058 DSTQ03001 7570 aaKnown RBP4.62□□□□□ -1.67
TRAPPC4-212ENST00000533058 KRTAP4-9Q9BYQ8 210 aa4.61□□□□□ -1.67
TRAPPC4-212ENST00000533058 MT1LQ93083 61 aa4.6□□□□□ -1.67
TRAPPC4-212ENST00000533058 KTN1-AS1Q86SY8 53 aa4.57□□□□□ -1.68
TRAPPC4-212ENST00000533058 MT1MQ8N339 61 aa4.57□□□□□ -1.68
TRAPPC4-212ENST00000533058 KRTAP4-2Q9BYR5 136 aa4.52□□□□□ -1.69
TRAPPC4-212ENST00000533058 KRTAP4-11Q9BYQ6 195 aa4.44□□□□□ -1.7
TRAPPC4-212ENST00000533058 KRTAP4-3Q9BYR4 195 aa4.41□□□□□ -1.7
TRAPPC4-212ENST00000533058 KRTAP5-4Q6L8H1 288 aa4.37□□□□□ -1.71
TRAPPC4-212ENST00000533058 HMCN1Q96RW7 5635 aa4.32□□□□□ -1.72
TRAPPC4-212ENST00000533058 LCE3CQ5T5A8 94 aa4.31□□□□□ -1.72
TRAPPC4-212ENST00000533058 MT4P47944 62 aa4.3□□□□□ -1.72
TRAPPC4-212ENST00000533058 GPR98Q8WXG9 6306 aa4.3□□□□□ -1.72
TRAPPC4-212ENST00000533058 MT3P25713 68 aa4.28□□□□□ -1.72
TRAPPC4-212ENST00000533058 KRTAP5-5Q701N2 237 aaPredicted RBP4.21□□□□□ -1.74
TRAPPC4-212ENST00000533058 SPRR5A0A1B0GTR4 108 aa4.12□□□□□ -1.75
TRAPPC4-212ENST00000533058 AHNAK2Q8IVF2 5795 aa4.12□□□□□ -1.75
TRAPPC4-212ENST00000533058 KRTAP20-2Q3LI61 65 aa4.09□□□□□ -1.75
TRAPPC4-212ENST00000533058 KRTAP12-4P60329 112 aa4.08□□□□□ -1.76
TRAPPC4-212ENST00000533058 KRTAP5-10Q6L8G5 202 aa4.08□□□□□ -1.76
TRAPPC4-212ENST00000533058 KRTAP5-3Q6L8H2 238 aa4.07□□□□□ -1.76
TRAPPC4-212ENST00000533058 LUZP6Q538Z0 58 aa4.02□□□□□ -1.77
TRAPPC4-212ENST00000533058 KRTAP9-6A8MVA2 160 aa4.01□□□□□ -1.77
TRAPPC4-212ENST00000533058 SYNE1Q8NF91 8797 aaKnown RBP3.98□□□□□ -1.77
TRAPPC4-212ENST00000533058 MT1AP04731 61 aa3.93□□□□□ -1.78
TRAPPC4-212ENST00000533058 KRTAP5-7Q6L8G8 165 aa3.93□□□□□ -1.78
TRAPPC4-212ENST00000533058 KRTAP6-1Q3LI64 71 aa3.87□□□□□ -1.79
TRAPPC4-212ENST00000533058 KRTAP5-2Q701N4 177 aa3.83□□□□□ -1.8
TRAPPC4-212ENST00000533058 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
TRAPPC4-212ENST00000533058 KRTAP6-2Q3LI66 62 aa3.69□□□□□ -1.82
TRAPPC4-212ENST00000533058 KRTAP5-8O75690 187 aa3.61□□□□□ -1.83
TRAPPC4-212ENST00000533058 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
TRAPPC4-212ENST00000533058 MUC5BQ9HC84 5762 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC4-212ENST00000533058 KRTAP5-1Q6L8H4 278 aa3.42□□□□□ -1.86
TRAPPC4-212ENST00000533058 AHNAKQ09666 5890 aaKnown RBP3.38□□□□□ -1.87
TRAPPC4-212ENST00000533058 MUC5ACP98088 5654 aa3.37□□□□□ -1.87
TRAPPC4-212ENST00000533058 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
TRAPPC4-212ENST00000533058 LCE3EQ5T5B0 92 aa3.2□□□□□ -1.9
TRAPPC4-212ENST00000533058 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
TRAPPC4-212ENST00000533058 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
TRAPPC4-212ENST00000533058 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
TRAPPC4-212ENST00000533058 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
TRAPPC4-212ENST00000533058 INE1O15225 51 aa3.01□□□□□ -1.93
TRAPPC4-212ENST00000533058 KRTAP5-11Q6L8G4 156 aa2.96□□□□□ -1.94
TRAPPC4-212ENST00000533058 KRTAP21-2Q3LI59 83 aa2.58□□□□□ -2
TRAPPC4-212ENST00000533058 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
TRAPPC4-212ENST00000533058 PRM1P04553 51 aa2.47□□□□□ -2.01
TRAPPC4-212ENST00000533058 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
TRAPPC4-212ENST00000533058 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
TRAPPC4-212ENST00000533058 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
TRAPPC4-212ENST00000533058 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 116.1 ms