RNA–Protein interactions for RNA: ENST00000532661.5

LTBP3-220, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-220ENST00000532661 KRTAP19-5Q3LI72 72 aa8.42□□□□□ -1.06
LTBP3-220ENST00000532661 BRK1Q8WUW1 75 aa8.42□□□□□ -1.06
LTBP3-220ENST00000532661 KRTAP4-9Q9BYQ8 210 aa8.35□□□□□ -1.07
LTBP3-220ENST00000532661 MT1GP13640 62 aa8.3□□□□□ -1.08
LTBP3-220ENST00000532661 GPR98Q8WXG9 6306 aa8.2□□□□□ -1.1
LTBP3-220ENST00000532661 PP632Q6XCG6 107 aa8.2□□□□□ -1.1
LTBP3-220ENST00000532661 MT1MQ8N339 61 aa8.19□□□□□ -1.1
LTBP3-220ENST00000532661 MT1LQ93083 61 aa8.18□□□□□ -1.1
LTBP3-220ENST00000532661 C10orf95Q9H7T3 257 aa8.16□□□□□ -1.1
LTBP3-220ENST00000532661 LCE3AQ5TA76 89 aa8.15□□□□□ -1.1
LTBP3-220ENST00000532661 PRO0628Q9UI54 55 aa8.12□□□□□ -1.11
LTBP3-220ENST00000532661 LCE1DQ5T752 114 aa8.11□□□□□ -1.11
LTBP3-220ENST00000532661 TNP1P09430 55 aa8.09□□□□□ -1.11
LTBP3-220ENST00000532661 KRTAP4-3Q9BYR4 195 aa8.06□□□□□ -1.12
LTBP3-220ENST00000532661 LCE4AQ5TA78 99 aa8.02□□□□□ -1.13
LTBP3-220ENST00000532661 MT4P47944 62 aa8.01□□□□□ -1.13
LTBP3-220ENST00000532661 HMCN1Q96RW7 5635 aa8.01□□□□□ -1.13
LTBP3-220ENST00000532661 ROMO1P60602 79 aa8□□□□□ -1.13
LTBP3-220ENST00000532661 PMAIP1Q13794 54 aa7.96□□□□□ -1.14
LTBP3-220ENST00000532661 KRTAP25-1Q3LHN0 102 aa7.88□□□□□ -1.15
LTBP3-220ENST00000532661 KRTAP5-4Q6L8H1 288 aa7.88□□□□□ -1.15
LTBP3-220ENST00000532661 KRTAP4-7Q9BYR0 210 aa7.85□□□□□ -1.15
LTBP3-220ENST00000532661 KRTAP12-3P60328 96 aa7.81□□□□□ -1.16
LTBP3-220ENST00000532661 KRTAP4-6Q9BYQ5 205 aa7.79□□□□□ -1.16
LTBP3-220ENST00000532661 AHNAK2Q8IVF2 5795 aa7.74□□□□□ -1.17
LTBP3-220ENST00000532661 KRTAP23-1A1A580 65 aa7.64□□□□□ -1.19
LTBP3-220ENST00000532661 KRTAP5-10Q6L8G5 202 aa7.59□□□□□ -1.19
LTBP3-220ENST00000532661 KTN1-AS1Q86SY8 53 aa7.57□□□□□ -1.2
LTBP3-220ENST00000532661 KRTAP5-5Q701N2 237 aaPredicted RBP7.52□□□□□ -1.21
LTBP3-220ENST00000532661 PRAC1Q96KF2 57 aa7.47□□□□□ -1.21
LTBP3-220ENST00000532661 KRTAP20-2Q3LI61 65 aa7.45□□□□□ -1.22
LTBP3-220ENST00000532661 LOC100996750A0A140TA64 210 aa7.43□□□□□ -1.22
LTBP3-220ENST00000532661 KRTAP5-3Q6L8H2 238 aa7.39□□□□□ -1.23
LTBP3-220ENST00000532661 SPRR5A0A1B0GTR4 108 aa7.36□□□□□ -1.23
LTBP3-220ENST00000532661 KRTAP12-4P60329 112 aa7.32□□□□□ -1.24
LTBP3-220ENST00000532661 KRTAP5-7Q6L8G8 165 aa7.29□□□□□ -1.24
LTBP3-220ENST00000532661 SYNE1Q8NF91 8797 aaKnown RBP7.26□□□□□ -1.25
LTBP3-220ENST00000532661 KRTAP19-4Q3LI73 84 aa7.26□□□□□ -1.25
LTBP3-220ENST00000532661 KRTAP15-1Q3LI76 137 aa7.25□□□□□ -1.25
LTBP3-220ENST00000532661 LCE3CQ5T5A8 94 aa7.18□□□□□ -1.26
LTBP3-220ENST00000532661 SVIPQ8NHG7 77 aa7.12□□□□□ -1.27
LTBP3-220ENST00000532661 KRTAP6-1Q3LI64 71 aa6.96□□□□□ -1.3
LTBP3-220ENST00000532661 MT1AP04731 61 aa6.95□□□□□ -1.3
LTBP3-220ENST00000532661 KRTAP5-2Q701N4 177 aa6.87□□□□□ -1.31
LTBP3-220ENST00000532661 KRTAP9-6A8MVA2 160 aa6.83□□□□□ -1.32
LTBP3-220ENST00000532661 KRTAP4-11Q9BYQ6 195 aa6.83□□□□□ -1.32
LTBP3-220ENST00000532661 KRTAP9-4Q9BYQ2 154 aa6.75□□□□□ -1.33
LTBP3-220ENST00000532661 KRTAP6-2Q3LI66 62 aa6.66□□□□□ -1.34
LTBP3-220ENST00000532661 KRTAP5-8O75690 187 aa6.61□□□□□ -1.35
LTBP3-220ENST00000532661 OBSCNQ5VST9 7968 aa6.48□□□□□ -1.37
LTBP3-220ENST00000532661 MUC5BQ9HC84 5762 aaPredicted RBP6.39□□□□□ -1.39
LTBP3-220ENST00000532661 AHNAKQ09666 5890 aaKnown RBP6.38□□□□□ -1.39
LTBP3-220ENST00000532661 MUC5ACP98088 5654 aa6.37□□□□□ -1.39
LTBP3-220ENST00000532661 MT3P25713 68 aa6.35□□□□□ -1.39
LTBP3-220ENST00000532661 KRTAP9-9Q9BYP9 154 aa6.26□□□□□ -1.41
LTBP3-220ENST00000532661 KRTAP5-1Q6L8H4 278 aa6.2□□□□□ -1.42
LTBP3-220ENST00000532661 LUZP6Q538Z0 58 aa6.19□□□□□ -1.42
LTBP3-220ENST00000532661 LCE1EQ5T753 118 aa5.84□□□□□ -1.47
LTBP3-220ENST00000532661 NDUFAF8A1L188 74 aa5.78□□□□□ -1.48
LTBP3-220ENST00000532661 KRTAP4-2Q9BYR5 136 aa5.59□□□□□ -1.51
LTBP3-220ENST00000532661 LCE1BQ5T7P3 118 aa5.58□□□□□ -1.52
LTBP3-220ENST00000532661 LCE1CQ5T751 118 aa5.43□□□□□ -1.54
LTBP3-220ENST00000532661 KRTAP4-12Q9BQ66 201 aa5.15□□□□□ -1.59
LTBP3-220ENST00000532661 LCE3DQ9BYE3 92 aa5.14□□□□□ -1.59
LTBP3-220ENST00000532661 A0A0A0MQY5 61 aa5.04□□□□□ -1.6
LTBP3-220ENST00000532661 KRTAP5-11Q6L8G4 156 aa4.93□□□□□ -1.62
LTBP3-220ENST00000532661 LCE3EQ5T5B0 92 aa4.92□□□□□ -1.62
LTBP3-220ENST00000532661 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.92□□□□□ -1.62
LTBP3-220ENST00000532661 INE1O15225 51 aa4.82□□□□□ -1.64
LTBP3-220ENST00000532661 LCE1FQ5T754 118 aa4.81□□□□□ -1.64
LTBP3-220ENST00000532661 KRTAP21-2Q3LI59 83 aa4.57□□□□□ -1.68
LTBP3-220ENST00000532661 H3BS24 57 aa4.52□□□□□ -1.69
LTBP3-220ENST00000532661 PHGR1C9JFL3 82 aa4.42□□□□□ -1.7
LTBP3-220ENST00000532661 KRTAP4-4Q9BYR3 166 aa4.26□□□□□ -1.73
LTBP3-220ENST00000532661 PRM1P04553 51 aa4.14□□□□□ -1.75
LTBP3-220ENST00000532661 MUC19Q7Z5P9 8384 aa3.99□□□□□ -1.77
LTBP3-220ENST00000532661 KRTAP21-1Q3LI58 79 aa3.33□□□□□ -1.88
LTBP3-220ENST00000532661 MUC16Q8WXI7 14507 aa2.78□□□□□ -1.96
Retrieved 78 of 20,778 RNA–protein pairs in 37.1 ms