RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 DSTQ03001 7570 aaKnown RBP2.54□□□□□ -2
TGFBR3-209ENST00000532540 KRTAP10-5P60370 271 aa2.51□□□□□ -2.01
TGFBR3-209ENST00000532540 OBSCNQ5VST9 7968 aa2.51□□□□□ -2.01
TGFBR3-209ENST00000532540 MUC12Q9UKN1 5478 aa2.5□□□□□ -2.01
TGFBR3-209ENST00000532540 LCE3CQ5T5A8 94 aa2.5□□□□□ -2.01
TGFBR3-209ENST00000532540 KRTAP19-5Q3LI72 72 aa2.43□□□□□ -2.02
TGFBR3-209ENST00000532540 KRTAP19-6Q3LI70 58 aa2.42□□□□□ -2.02
TGFBR3-209ENST00000532540 SYNE1Q8NF91 8797 aaKnown RBP2.42□□□□□ -2.02
TGFBR3-209ENST00000532540 MDN1Q9NU22 5596 aa2.41□□□□□ -2.02
TGFBR3-209ENST00000532540 KRTAP12-4P60329 112 aa2.39□□□□□ -2.03
TGFBR3-209ENST00000532540 KRTAP4-12Q9BQ66 201 aa2.39□□□□□ -2.03
TGFBR3-209ENST00000532540 SPRR2EP22531 72 aa2.38□□□□□ -2.03
TGFBR3-209ENST00000532540 SPRR2BP35325 72 aa2.38□□□□□ -2.03
TGFBR3-209ENST00000532540 SPRR2AP35326 72 aa2.38□□□□□ -2.03
TGFBR3-209ENST00000532540 NEBP20929 6669 aa2.38□□□□□ -2.03
TGFBR3-209ENST00000532540 KRTAP6-3Q3LI67 103 aa2.36□□□□□ -2.03
TGFBR3-209ENST00000532540 KRTAP4-7Q9BYR0 210 aa2.33□□□□□ -2.04
TGFBR3-209ENST00000532540 KRTAP20-1Q3LI63 56 aa2.33□□□□□ -2.04
TGFBR3-209ENST00000532540 KRTAP19-4Q3LI73 84 aa2.32□□□□□ -2.04
TGFBR3-209ENST00000532540 SPRR2DP22532 72 aa2.28□□□□□ -2.04
TGFBR3-209ENST00000532540 KRTAP4-3Q9BYR4 195 aa2.27□□□□□ -2.05
TGFBR3-209ENST00000532540 KRTAP2-3P0C7H8 128 aa2.27□□□□□ -2.05
TGFBR3-209ENST00000532540 KRTAP2-4Q9BYR9 128 aa2.27□□□□□ -2.05
TGFBR3-209ENST00000532540 KRTAP2-1Q9BYU5 128 aa2.27□□□□□ -2.05
TGFBR3-209ENST00000532540 MT1EP04732 61 aa2.23□□□□□ -2.05
TGFBR3-209ENST00000532540 MT1GP13640 62 aa2.23□□□□□ -2.05
TGFBR3-209ENST00000532540 KRTAP19-7Q3SYF9 63 aa2.23□□□□□ -2.05
TGFBR3-209ENST00000532540 KRTAP19-3Q7Z4W3 81 aa2.2□□□□□ -2.06
TGFBR3-209ENST00000532540 KRTAP9-9Q9BYP9 154 aa2.2□□□□□ -2.06
TGFBR3-209ENST00000532540 KRTAP9-4Q9BYQ2 154 aa2.2□□□□□ -2.06
TGFBR3-209ENST00000532540 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
TGFBR3-209ENST00000532540 MT1LQ93083 61 aa2.19□□□□□ -2.06
TGFBR3-209ENST00000532540 KRTAP9-6A8MVA2 160 aa2.17□□□□□ -2.06
TGFBR3-209ENST00000532540 KRTAP5-9P26371 169 aa2.16□□□□□ -2.06
TGFBR3-209ENST00000532540 LCE1EQ5T753 118 aa2.16□□□□□ -2.06
TGFBR3-209ENST00000532540 LCE1AQ5T7P2 110 aa2.16□□□□□ -2.06
TGFBR3-209ENST00000532540 LCE3BQ5TA77 95 aa2.14□□□□□ -2.07
TGFBR3-209ENST00000532540 MT1MQ8N339 61 aa2.14□□□□□ -2.07
TGFBR3-209ENST00000532540 MT4P47944 62 aa2.13□□□□□ -2.07
TGFBR3-209ENST00000532540 LCE3EQ5T5B0 92 aa2.13□□□□□ -2.07
TGFBR3-209ENST00000532540 LCE3DQ9BYE3 92 aa2.13□□□□□ -2.07
TGFBR3-209ENST00000532540 PRM1P04553 51 aa2.12□□□□□ -2.07
TGFBR3-209ENST00000532540 KRTAP2-2Q9BYT5 123 aa2.12□□□□□ -2.07
TGFBR3-209ENST00000532540 GPR98Q8WXG9 6306 aa2.11□□□□□ -2.07
TGFBR3-209ENST00000532540 KRTAP4-9Q9BYQ8 210 aa2.1□□□□□ -2.07
TGFBR3-209ENST00000532540 LCE1FQ5T754 118 aa2.06□□□□□ -2.08
TGFBR3-209ENST00000532540 LCE5AQ5TCM9 118 aa2.05□□□□□ -2.08
TGFBR3-209ENST00000532540 LCE4AQ5TA78 99 aa2.05□□□□□ -2.08
TGFBR3-209ENST00000532540 LCE1DQ5T752 114 aa2.02□□□□□ -2.09
TGFBR3-209ENST00000532540 KRTAP4-2Q9BYR5 136 aa2□□□□□ -2.09
TGFBR3-209ENST00000532540 KRTAP4-11Q9BYQ6 195 aa1.96□□□□□ -2.1
TGFBR3-209ENST00000532540 HMCN1Q96RW7 5635 aa1.93□□□□□ -2.1
TGFBR3-209ENST00000532540 MT1AP04731 61 aa1.92□□□□□ -2.1
TGFBR3-209ENST00000532540 KRTAP6-1Q3LI64 71 aa1.91□□□□□ -2.1
TGFBR3-209ENST00000532540 KRTAP6-2Q3LI66 62 aa1.88□□□□□ -2.11
TGFBR3-209ENST00000532540 AHNAK2Q8IVF2 5795 aa1.84□□□□□ -2.11
TGFBR3-209ENST00000532540 MT3P25713 68 aa1.78□□□□□ -2.12
TGFBR3-209ENST00000532540 KRTAP5-10Q6L8G5 202 aa1.76□□□□□ -2.13
TGFBR3-209ENST00000532540 LCE1BQ5T7P3 118 aa1.75□□□□□ -2.13
TGFBR3-209ENST00000532540 KRTAP5-3Q6L8H2 238 aa1.75□□□□□ -2.13
TGFBR3-209ENST00000532540 KRTAP5-5Q701N2 237 aaPredicted RBP1.75□□□□□ -2.13
TGFBR3-209ENST00000532540 KRTAP20-2Q3LI61 65 aa1.73□□□□□ -2.13
TGFBR3-209ENST00000532540 MUC5ACP98088 5654 aa1.68□□□□□ -2.14
TGFBR3-209ENST00000532540 KRTAP5-7Q6L8G8 165 aa1.67□□□□□ -2.14
TGFBR3-209ENST00000532540 KRTAP5-4Q6L8H1 288 aa1.67□□□□□ -2.14
TGFBR3-209ENST00000532540 AHNAKQ09666 5890 aaKnown RBP1.61□□□□□ -2.15
TGFBR3-209ENST00000532540 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
TGFBR3-209ENST00000532540 KRTAP5-8O75690 187 aa1.55□□□□□ -2.16
TGFBR3-209ENST00000532540 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.44□□□□□ -2.18
TGFBR3-209ENST00000532540 KRTAP5-2Q701N4 177 aa1.43□□□□□ -2.18
TGFBR3-209ENST00000532540 LCE1CQ5T751 118 aa1.39□□□□□ -2.19
TGFBR3-209ENST00000532540 KRTAP4-4Q9BYR3 166 aa1.39□□□□□ -2.19
TGFBR3-209ENST00000532540 KRTAP5-11Q6L8G4 156 aa1.37□□□□□ -2.19
TGFBR3-209ENST00000532540 KRTAP5-1Q6L8H4 278 aa1.36□□□□□ -2.19
TGFBR3-209ENST00000532540 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
TGFBR3-209ENST00000532540 PHGR1C9JFL3 82 aa1.12□□□□□ -2.23
TGFBR3-209ENST00000532540 KRTAP21-2Q3LI59 83 aa1.11□□□□□ -2.23
TGFBR3-209ENST00000532540 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 379.3 ms