RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-208ENST00000532446 SPRR2AP35326 72 aa6.66□□□□□ -1.34
PPP1CA-208ENST00000532446 KRTAP2-3P0C7H8 128 aa6.64□□□□□ -1.35
PPP1CA-208ENST00000532446 KRTAP2-4Q9BYR9 128 aa6.64□□□□□ -1.35
PPP1CA-208ENST00000532446 MT1EP04732 61 aa6.6□□□□□ -1.35
PPP1CA-208ENST00000532446 KRTAP12-3P60328 96 aa6.59□□□□□ -1.36
PPP1CA-208ENST00000532446 LCE1AQ5T7P2 110 aa6.58□□□□□ -1.36
PPP1CA-208ENST00000532446 KTN1-AS1Q86SY8 53 aa6.52□□□□□ -1.37
PPP1CA-208ENST00000532446 PRAC1Q96KF2 57 aa6.52□□□□□ -1.37
PPP1CA-208ENST00000532446 SPRR2DP22532 72 aa6.44□□□□□ -1.38
PPP1CA-208ENST00000532446 KRTAP2-2Q9BYT5 123 aa6.43□□□□□ -1.38
PPP1CA-208ENST00000532446 KRTAP2-1Q9BYU5 128 aa6.43□□□□□ -1.38
PPP1CA-208ENST00000532446 MT1LQ93083 61 aa6.42□□□□□ -1.38
PPP1CA-208ENST00000532446 KRTAP19-3Q7Z4W3 81 aa6.41□□□□□ -1.38
PPP1CA-208ENST00000532446 KRTAP15-1Q3LI76 137 aa6.37□□□□□ -1.39
PPP1CA-208ENST00000532446 LCE5AQ5TCM9 118 aa6.36□□□□□ -1.39
PPP1CA-208ENST00000532446 MT1GP13640 62 aa6.34□□□□□ -1.4
PPP1CA-208ENST00000532446 LCE3BQ5TA77 95 aa6.28□□□□□ -1.4
PPP1CA-208ENST00000532446 KRTAP19-4Q3LI73 84 aa6.24□□□□□ -1.41
PPP1CA-208ENST00000532446 MT1MQ8N339 61 aa6.24□□□□□ -1.41
PPP1CA-208ENST00000532446 KRTAP4-7Q9BYR0 210 aa6.15□□□□□ -1.42
PPP1CA-208ENST00000532446 LCE3CQ5T5A8 94 aa6.14□□□□□ -1.43
PPP1CA-208ENST00000532446 KRTAP4-3Q9BYR4 195 aa6.09□□□□□ -1.43
PPP1CA-208ENST00000532446 DSTQ03001 7570 aaKnown RBP6.01□□□□□ -1.45
PPP1CA-208ENST00000532446 KRTAP4-9Q9BYQ8 210 aa5.84□□□□□ -1.47
PPP1CA-208ENST00000532446 KRTAP9-6A8MVA2 160 aa5.8□□□□□ -1.48
PPP1CA-208ENST00000532446 LOC100996750A0A140TA64 210 aa5.79□□□□□ -1.48
PPP1CA-208ENST00000532446 SPRR5A0A1B0GTR4 108 aa5.78□□□□□ -1.48
PPP1CA-208ENST00000532446 GPR98Q8WXG9 6306 aa5.72□□□□□ -1.49
PPP1CA-208ENST00000532446 LCE1DQ5T752 114 aa5.71□□□□□ -1.49
PPP1CA-208ENST00000532446 LCE4AQ5TA78 99 aa5.71□□□□□ -1.49
PPP1CA-208ENST00000532446 KRTAP5-5Q701N2 237 aaPredicted RBP5.68□□□□□ -1.5
PPP1CA-208ENST00000532446 MT4P47944 62 aa5.64□□□□□ -1.51
PPP1CA-208ENST00000532446 KRTAP5-4Q6L8H1 288 aa5.6□□□□□ -1.51
PPP1CA-208ENST00000532446 HMCN1Q96RW7 5635 aa5.58□□□□□ -1.52
PPP1CA-208ENST00000532446 KRTAP4-6Q9BYQ5 205 aa5.48□□□□□ -1.53
PPP1CA-208ENST00000532446 MT1AP04731 61 aa5.46□□□□□ -1.53
PPP1CA-208ENST00000532446 KRTAP6-1Q3LI64 71 aa5.41□□□□□ -1.54
PPP1CA-208ENST00000532446 AHNAK2Q8IVF2 5795 aa5.39□□□□□ -1.55
PPP1CA-208ENST00000532446 LUZP6Q538Z0 58 aa5.37□□□□□ -1.55
PPP1CA-208ENST00000532446 KRTAP12-4P60329 112 aa5.34□□□□□ -1.55
PPP1CA-208ENST00000532446 KRTAP5-10Q6L8G5 202 aa5.34□□□□□ -1.55
PPP1CA-208ENST00000532446 SYNE1Q8NF91 8797 aaKnown RBP5.29□□□□□ -1.56
PPP1CA-208ENST00000532446 KRTAP20-2Q3LI61 65 aa5.27□□□□□ -1.57
PPP1CA-208ENST00000532446 KRTAP9-4Q9BYQ2 154 aa5.22□□□□□ -1.57
PPP1CA-208ENST00000532446 KRTAP5-3Q6L8H2 238 aa5.21□□□□□ -1.58
PPP1CA-208ENST00000532446 KRTAP5-7Q6L8G8 165 aa5.14□□□□□ -1.59
PPP1CA-208ENST00000532446 H3BS24 57 aa5.04□□□□□ -1.6
PPP1CA-208ENST00000532446 KRTAP6-2Q3LI66 62 aa5.04□□□□□ -1.6
PPP1CA-208ENST00000532446 KRTAP5-2Q701N4 177 aa5.02□□□□□ -1.61
PPP1CA-208ENST00000532446 NDUFAF8A1L188 74 aa4.98□□□□□ -1.61
PPP1CA-208ENST00000532446 MT3P25713 68 aa4.96□□□□□ -1.62
PPP1CA-208ENST00000532446 KRTAP4-11Q9BYQ6 195 aa4.83□□□□□ -1.64
PPP1CA-208ENST00000532446 KRTAP5-8O75690 187 aa4.68□□□□□ -1.66
PPP1CA-208ENST00000532446 OBSCNQ5VST9 7968 aa4.6□□□□□ -1.67
PPP1CA-208ENST00000532446 LCE3DQ9BYE3 92 aa4.55□□□□□ -1.68
PPP1CA-208ENST00000532446 A0A0A0MQY5 61 aa4.52□□□□□ -1.69
PPP1CA-208ENST00000532446 MUC5ACP98088 5654 aa4.45□□□□□ -1.7
PPP1CA-208ENST00000532446 KRTAP9-9Q9BYP9 154 aa4.44□□□□□ -1.7
PPP1CA-208ENST00000532446 MUC5BQ9HC84 5762 aaPredicted RBP4.44□□□□□ -1.7
PPP1CA-208ENST00000532446 AHNAKQ09666 5890 aaKnown RBP4.44□□□□□ -1.7
PPP1CA-208ENST00000532446 LCE1EQ5T753 118 aa4.42□□□□□ -1.7
PPP1CA-208ENST00000532446 KRTAP5-1Q6L8H4 278 aa4.39□□□□□ -1.71
PPP1CA-208ENST00000532446 LCE3EQ5T5B0 92 aa4.38□□□□□ -1.71
PPP1CA-208ENST00000532446 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
PPP1CA-208ENST00000532446 INE1O15225 51 aa4.11□□□□□ -1.75
PPP1CA-208ENST00000532446 LCE1CQ5T751 118 aa4.11□□□□□ -1.75
PPP1CA-208ENST00000532446 LCE1BQ5T7P3 118 aa4.11□□□□□ -1.75
PPP1CA-208ENST00000532446 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.82□□□□□ -1.8
PPP1CA-208ENST00000532446 KRTAP5-11Q6L8G4 156 aa3.66□□□□□ -1.82
PPP1CA-208ENST00000532446 PRM1P04553 51 aa3.65□□□□□ -1.83
PPP1CA-208ENST00000532446 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.84
PPP1CA-208ENST00000532446 KRTAP21-2Q3LI59 83 aa3.56□□□□□ -1.84
PPP1CA-208ENST00000532446 LCE1FQ5T754 118 aa3.46□□□□□ -1.86
PPP1CA-208ENST00000532446 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
PPP1CA-208ENST00000532446 PHGR1C9JFL3 82 aa3.14□□□□□ -1.91
PPP1CA-208ENST00000532446 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.95
PPP1CA-208ENST00000532446 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
PPP1CA-208ENST00000532446 MUC16Q8WXI7 14507 aa1.99□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 71 ms